Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j15f
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical ... 101 3e-22
Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical pr... 96 2e-20
Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical pr... 93 1e-19
U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical pr... 90 1e-18
AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical ... 89 3e-18
Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical pr... 86 2e-17
AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical ... 81 6e-16
AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical ... 54 6e-08
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 27 8.1
>AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical
protein Y57E12B.3 protein.
Length = 684
Score = 101 bits (243), Expect = 3e-22
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 6/175 (3%)
Frame = +2
Query: 95 INELFGRSDFFTN-VGMRFCADGVFFQA----MCTNMLFAFAGRSEDMHNATMLPVKLGH 259
+ ++FG +F TN + + D QA +C N +FA +G + + N + + + L H
Sbjct: 469 VYQVFGDGEFLTNNIFTKLLTDIFCDQAVNNPLCENFIFAVSGPNSNQFNNSRIGIYLAH 528
Query: 260 TPAGIAVRQIAHYGQLINNNFFRRYDHGRLKNWRVYRSFTPPRYDLSLITAPVFLHYVDD 439
PAG + R I H+ Q++ R+DHG+ N ++Y + +PP YD+ I + ++L Y D
Sbjct: 529 NPAGTSSRNILHFAQMVKKKRMSRFDHGKDLNLKIYGAPSPPEYDIRKINSSIYLFYSDF 588
Query: 440 DIFADVRDVRKLQIELGRPVGMFRVPH-ATFSHLDFMWGSGAKELLYDRTIQIMR 601
D A+ +DV I + + + F+H DF+WG A++ +YD+ I ++
Sbjct: 589 DWLANPKDVEGFLIPMLPSKTLKKATKLRDFNHNDFLWGMRARKEIYDKIINTIK 643
>Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical
protein F54F3.3 protein.
Length = 405
Score = 95.9 bits (228), Expect = 2e-20
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Frame = +2
Query: 101 ELFGRSDFFTN------VGMRFCADGVFFQAMCTNMLFAFAGRSEDMHNATMLPVKLGHT 262
++FG +F N V CA +C +++F AG + NAT +P+ + HT
Sbjct: 225 DVFGSGEFLPNNWIMKLVSESVCAGLKVEAGVCDDVMFLIAGPESNQLNATRVPIYVAHT 284
Query: 263 PAGIAVRQIAHYGQLINNNFFRRYDHGRLKNWRVYRSFTPPRYDLSLITAPVFLHYVDDD 442
PAG + + I H+ Q++ + +YD+G N + Y P YD + + PV+L++ D D
Sbjct: 285 PAGTSTQNIVHWIQMVRHGGTPKYDYGEKGNKKHYGQANVPAYDFTTVNRPVYLYWGDSD 344
Query: 443 IFADVRDVRK-LQIELGRPVGMFRVPHATFSHLDFMWGSGAKELLYDRTIQIMRS 604
AD DV L L + ++HLDF+WG A + +Y+ I I+R+
Sbjct: 345 WLADPTDVTDFLLTHLNPSTVVQNNKLIDYNHLDFIWGLRAPKDIYEPIIDIVRN 399
>Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical
protein F01G10.7 protein.
Length = 409
Score = 93.1 bits (221), Expect = 1e-19
Identities = 50/148 (33%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Frame = +2
Query: 164 FFQAMCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINNNFFRRYDHG 343
F Q +CT + F +E M N + + V L HTPA +V+ + H+ QL+ + ++D+G
Sbjct: 247 FMQNICT-LDIGFIDGNEKMFNQSRVGVYLCHTPAATSVKDLQHWIQLVKSQTVSKFDYG 305
Query: 344 RLKNWRVYRSFTPPRYDLSLITAPVFLHYVDDDIFADVRDVR-KLQIELGRPV-GMFRVP 517
N Y TPP YDL+ I P +L++ DDI AD +D+R + ++ + + G +P
Sbjct: 306 TDGNIIEYGQPTPPEYDLTQINTPTYLYWSRDDILADTQDIRDSILSKMNKTIAGSLELP 365
Query: 518 HATFSHLDFMWGSGAKELLYDRTIQIMR 601
H +SH+DF++G+ A LY + I+ ++
Sbjct: 366 H--YSHMDFVFGTHAAFDLYPKIIETIQ 391
>U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical
protein K04A8.5 protein.
Length = 411
Score = 90.2 bits (214), Expect = 1e-18
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Frame = +2
Query: 92 GINELFGRSDFFTNVGMRFCADGVFFQAMCTNMLFAFAGRSEDMHNATMLPVKLGHTPAG 271
G +ELFG S F + C + C+++ F G + + N T +PV L HTPAG
Sbjct: 235 GSDELFGSSLLFKKIVKYTCGLFDTLEEFCSDITLLFIGTANENWNQTRIPVYLAHTPAG 294
Query: 272 IAVRQIAHYGQLINNNFFRRYDHGRLKNWRVYRSFTPPRYDLS-LITAPVFLHYVDDDIF 448
+ +AH Q+ + +D G KN + Y PP+Y+ + + P++L + DDD
Sbjct: 295 SSSNVMAHLDQMFSYGGVPTFDMGEEKNLKAYGQKLPPQYNFTGIADVPIYLFWSDDDWL 354
Query: 449 ADVRDVRK-LQIELGRPV--GMFRVPHATFSHLDFMWGSGAKELLYD 580
+ +D+ + L +L V G FR+ + ++HL F+WG+ A +Y+
Sbjct: 355 STKQDLEETLFAQLNSQVVQGSFRIEN--YNHLHFIWGTNAASQVYN 399
>AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical
protein ZK6.7a protein.
Length = 403
Score = 88.6 bits (210), Expect = 3e-18
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Frame = +2
Query: 101 ELFGRSDFF-TNVGMRFCAD----GVFFQA-MCTNMLFAFAGRSEDMHNATMLPVKLGHT 262
++FG +F N M+ A G+ +A +C N+LF AG D N T +PV H
Sbjct: 223 DIFGAGEFLPNNWAMKLAAKDICGGLKVEADLCDNVLFLIAGPESDQWNQTRVPVYATHD 282
Query: 263 PAGIAVRQIAHYGQLINNNFFRRYDHGRLKNWRVYRSFTPPRYDLSLIT-APVFLHYVDD 439
PAG + + I H+ Q++++ YD G N + Y PP YD + I ++L++ D
Sbjct: 283 PAGTSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYGQANPPEYDFTAIKGTKIYLYWSDA 342
Query: 440 DIFADVRDVRKLQIELGRPVGMFRVPH-ATFSHLDFMWGSGAKELLYDRTIQI 595
D AD DV + P + + H ++HLDF WG A + +Y I++
Sbjct: 343 DWLADTPDVPDYLLTRLNPAIVAQNNHLPDYNHLDFTWGLRAPDDIYRPAIKL 395
>Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical
protein F46B6.8 protein.
Length = 411
Score = 85.8 bits (203), Expect = 2e-17
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Frame = +2
Query: 92 GINELFGRSDFF-----TNVGMR-FCADGVFFQAMCTNMLFAFAGRSEDMHNATMLPVKL 253
G ELFG DF T + + C +C N LF G D NA+ +
Sbjct: 227 GWYELFGSKDFLPDNWITKMAAKDICGASEKEAELCDNELFLIGGPESDQWNASRTAIYS 286
Query: 254 GHTPAGIAVRQIAHYGQLINNNFFRRYDHGRLKNWRVYRSFTPPRYDLSLIT-APVFLHY 430
PAG + + I H+ Q++ N +D G+ N + Y TPP YD I + L++
Sbjct: 287 SQDPAGTSTQNIVHWMQMVRNGRVPAFDWGKKINKKKYGQDTPPEYDFGAIKGTKIHLYW 346
Query: 431 VDDDIFADVRDVRKLQI-ELGRPVGMFRVPHATFSHLDFMWGSGAKELLYDRTIQ 592
DDD D D+ + EL V V ++HLDF WG A +YD+ I+
Sbjct: 347 SDDDWLGDPTDIHDFLLKELNPAVIAENVNLKEYNHLDFTWGLNATFQIYDKAIK 401
>AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical
protein R11G11.14 protein.
Length = 404
Score = 81.0 bits (191), Expect = 6e-16
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Frame = +2
Query: 101 ELFGRSDFF-TNVGMRFCAD----GVFFQA-MCTNMLFAFAGRSEDMHNATMLPVKLGHT 262
++FG +F N M+ A G+ ++ +C N+ F AG D N+T +PV H
Sbjct: 224 DVFGAGEFLPNNWAMKLAAKDICGGLKIESDLCDNVCFLIAGPESDQWNSTRVPVYASHD 283
Query: 263 PAGIAVRQIAHYGQLINNNFFRRYDHGRLKNWRVYRSFTPPRYDLSLIT-APVFLHYVDD 439
PAG A + I H+ Q++ + YD G +N + Y PP YD + I ++L++ D
Sbjct: 284 PAGTATQNIVHWIQMVRHGGVPAYDWGSKENKKKYGQANPPEYDFTAIKGTQIYLYWSDA 343
Query: 440 DIFADVRDVRKLQIELGRPVGMFRVPHAT-FSHLDFMWGSGAKELLY 577
D AD D+ + P + + + T ++H DF++G A +Y
Sbjct: 344 DWLADKTDITNYLLTRLNPAIIAQNNYFTDYNHFDFVFGLRAPNDIY 390
>AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical
protein Y50E8A.7 protein.
Length = 401
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Frame = +2
Query: 146 FCADGVFFQAMCTNMLFAFAG-RSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINNNF 322
FC+ FF +C+ AG + N + +P+ L H P+ + + H+ Q+ +
Sbjct: 242 FCSSK-FFTFLCSAGFKVAAGIETLGQVNDSRIPIILSHFPSATSTLNLLHWMQIFKYHE 300
Query: 323 FRRYDHGRLKNWRVYRSFTPPRYDLSLITAPVFLHYVDDDIFADVRDVRKLQIELGRP-- 496
RR D G +N Y PR ++ I A L++ DD D DVR++ ++ P
Sbjct: 301 LRRLDLGTARNLIAYGQKDAPRLEIGNIIAQTILYFSKDDQITDEVDVREIIMKQMGPGL 360
Query: 497 VGMFRVPHATFSHLDFMWGSGAKELLY 577
+ + + H F+H DF+ G A + +Y
Sbjct: 361 IESYDLDH--FTHFDFILGLRATDEVY 385
>AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical
protein ZK6.7b protein.
Length = 351
Score = 54.4 bits (125), Expect = 6e-08
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +2
Query: 101 ELFGRSDFF-TNVGMRFCAD----GVFFQA-MCTNMLFAFAGRSEDMHNATMLPVKLGHT 262
++FG +F N M+ A G+ +A +C N+LF AG D N T +PV H
Sbjct: 223 DIFGAGEFLPNNWAMKLAAKDICGGLKVEADLCDNVLFLIAGPESDQWNQTRVPVYATHD 282
Query: 263 PAGIAVRQIAHYGQLINNNFFRRYDHGRLKNWRVYRSFT 379
PAG + + I H+ Q++++ YD G N + Y T
Sbjct: 283 PAGTSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYGQST 321
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 17 EFNANRLLKLIAPHANSIEALTSLIGINELF 109
+F +R+ + APH +S E T + +NELF
Sbjct: 869 QFGRDRMNQSQAPHCDSYELKTFISTVNELF 899
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,572,952
Number of Sequences: 27780
Number of extensions: 317981
Number of successful extensions: 726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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