Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j15f
         (615 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    24   1.0  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   4.1  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   4.1  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   4.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.2  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +2

Query: 92  GINELFGRSDFFTNVGMRFCADGVFFQAMC-TNMLFAFAGRSEDMHNATMLPVKLGH-TP 265
           G+N+L G   F    G RFC   + F  MC T  +      S D +     P++ G    
Sbjct: 83  GVNDLLGYWVF----GPRFCDTWIAFDVMCSTASILNLCAISLDRYIHIKDPLRYGRWVT 138

Query: 266 AGIAVRQIA 292
             IAV  IA
Sbjct: 139 RRIAVAGIA 147


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 272 IAVRQIAHYGQLINNNFFRRYDHGR 346
           I V +I H  +L+NN F    D GR
Sbjct: 32  INVDEILHSDRLLNNYFKCLMDEGR 56


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 272 IAVRQIAHYGQLINNNFFRRYDHGR 346
           I V +I H  +L+NN F    D GR
Sbjct: 32  INVDEILHSDRLLNNYFKCLMDEGR 56


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 272 IAVRQIAHYGQLINNNFFRRYDHGR 346
           I V +I H  +L+NN F    D GR
Sbjct: 32  INVDEILHSDRLLNNYFKCLMDEGR 56


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 248 KLGHTPAGIAVRQIAHYGQLINN 316
           K  HTP GI    IAH   L N+
Sbjct: 791 KQSHTPNGIVKTWIAHDRYLPNS 813


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 467 RKLQIELGRPVGMFRVPHATF 529
           ++LQIEL R   +F   H TF
Sbjct: 158 KELQIELVREEILFDTVHVTF 178


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,421
Number of Sequences: 438
Number of extensions: 3662
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)