Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j14r
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   3.2  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   4.2  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   5.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   9.7  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 150 LISNNCSKYLNRKRGLFKNMI 212
           +++NN +KY     GL KN +
Sbjct: 239 ILTNNQAKYCTTLIGLIKNCV 259


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 153 ISNNCSKYLNRKRGLFKNMIKYLI 224
           +  +CSK   R++   + +I+YLI
Sbjct: 69  LQTSCSKCSQRQKDGSRTIIRYLI 92


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 153 ISNNCSKYLNRKRGLFKNMIKYLI 224
           +  +CSK   R++   + +I+YLI
Sbjct: 69  LQTSCSKCSQRQQDGSRTIIRYLI 92


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 308 RKFLNFIYTFV 340
           RK L+FI+TF+
Sbjct: 442 RKKLDFIFTFI 452


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,017
Number of Sequences: 336
Number of extensions: 1740
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)