Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j14r
         (384 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011...    28   2.9  
02_02_0067 - 6509478-6509483,6510742-6511270,6512066-6512070,651...    28   2.9  

>06_03_1490 +
           30497980-30498102,30499034-30500156,30500914-30501132,
           30501228-30501454,30501810-30501884,30502250-30502321,
           30502765-30502863,30502975-30503046,30503131-30503245,
           30503455-30503523,30503625-30503952,30504320-30504437,
           30504522-30505448
          Length = 1188

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 98  DDRTFSQLQNKRLKIYTNIIK 36
           D+ TF ++Q K+L+IY  I+K
Sbjct: 638 DEATFREIQEKKLEIYNAIVK 658


>02_02_0067 -
           6509478-6509483,6510742-6511270,6512066-6512070,
           6512523-6512651,6512769-6512879,6513794-6513906,
           6515036-6515096
          Length = 317

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 93  VVFKYIDLFGLFYYLK 140
           VVF Y+DL  LFY+L+
Sbjct: 229 VVFSYVDLVSLFYFLR 244


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,879,696
Number of Sequences: 37544
Number of extensions: 125700
Number of successful extensions: 159
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)