Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j14f
         (563 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   1.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   5.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.6  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 318 DGRLR*LDPH*KILRGKCNWLCTLADLDPGLQTLVA 211
           D R++ L+P+  + +G       L   +P L+TLVA
Sbjct: 62  DSRIKHLEPNLDVNQGNLKKFNALKLKNPNLKTLVA 97


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
 Frame = -2

Query: 457 GIMSPMCQALMTHKGLPSQPSCPP-----TTARPVS-EDAVVAVVATQSYSP 320
           G +  +C     H   P  P CPP         PVS  D+  + V++ SY+P
Sbjct: 12  GEVLDLCVRKRPHSPEPYPPRCPPIYEPSCQYSPVSNSDSENSEVSSNSYTP 63


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 56  LLPTPACPSLASPPS 100
           LLPTP C   +S P+
Sbjct: 190 LLPTPTCSEASSSPT 204


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 318 DGRLR*LDPH*KILRGKCNWLCTLADLDPGLQTLVA 211
           DG +R LD +  +  G    L  L   +P L+TL+A
Sbjct: 66  DGNVRHLDEYLDVDAGTIAKLNALKVKNPNLKTLIA 101


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 222 SGAPDQGQPTYITNYIYHGESSNV 293
           +GAP Q  PT+   ++   +  NV
Sbjct: 10  AGAPPQEMPTWFVRWLNSQQPRNV 33


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 480 CASRTVFQVSCP 445
           C+S  VFQ  CP
Sbjct: 162 CSSEEVFQFECP 173


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 536 EPQYLNGNLFTVVH 495
           +PQ +N NL T VH
Sbjct: 44  KPQNINANLCTHVH 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,601
Number of Sequences: 336
Number of extensions: 2268
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)