Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j14f
         (563 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         45   1e-06
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.9  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    23   5.2  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 45.2 bits (102), Expect = 1e-06
 Identities = 30/84 (35%), Positives = 40/84 (47%)
 Frame = +3

Query: 270 YHGESSNVDQVSVVDHPGEYDWVXXXXXXXSSLTGRAVVGGHEGWDGSPLWVIRAWHMGD 449
           Y G+ + V+ V V+ H  +  W          +   AVVGGH   DG  L+V RA+H G 
Sbjct: 57  YGGQETLVEHVEVLVHK-QLIW---DTASAGQVPLGAVVGGHTS-DGEILYVGRAYHEGS 111

Query: 450 MIPGKLSVRHNAASIMYNGKEIPV 521
              GK+   HN   I Y G E+ V
Sbjct: 112 QTIGKVQCSHNCIYIPYGGAEVSV 135



 Score = 37.1 bits (82), Expect = 4e-04
 Identities = 19/48 (39%), Positives = 29/48 (60%)
 Frame = +3

Query: 381 VVGGHEGWDGSPLWVIRAWHMGDMIPGKLSVRHNAASIMYNGKEIPVQ 524
           V GG +  DG+ ++V RA H GD++P K+     AA + Y G+E  V+
Sbjct: 19  VPGGVDS-DGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGGQETLVE 65


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -3

Query: 96  GGEASEGQAGVGSKAEALRNI 34
           GG    G  G GS A ALRN+
Sbjct: 169 GGGGGGGGGGAGSFAAALRNL 189


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = -2

Query: 514 ISLPLYIIEAALCLTDSFPGIMSPMCQALMTHKGLPSQPSCPPTTA 377
           ++LP  ++    CL+     I    C  L     LP+  +C  T A
Sbjct: 3   VALPFSVVGKLTCLSPFLQSIKVASCCQLEAFLTLPTYGNCLQTIA 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,622
Number of Sequences: 2352
Number of extensions: 9829
Number of successful extensions: 46
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)