Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j11r
(743 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 0.57
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.57
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.57
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.57
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.57
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 25 0.57
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 2.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 3.0
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 3.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 3.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.3
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 5.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 5.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.3
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 7.0
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 7.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.2
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N N K+YYNI Y+
Sbjct: 99 NNNYNKKLYYNINYI 113
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N N K+YYNI Y+
Sbjct: 101 NNNYNKKLYYNINYI 115
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N N K+YYNI Y+
Sbjct: 101 NNNYNKKLYYNINYI 115
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N N K+YYNI Y+
Sbjct: 101 NNNYNKKLYYNINYI 115
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N N K+YYNI Y+
Sbjct: 101 NNNYNKKLYYNINYI 115
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 25.4 bits (53), Expect = 0.57
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N N K+YYNI Y+
Sbjct: 337 NNNYNKKLYYNINYI 351
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
+ N N K+YYNI Y+
Sbjct: 99 DNNYNKKLYYNINYI 113
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.0
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -2
Query: 241 LEN**QKISVILYKYDLKLRGKN*LTKMKM*KCITIFLMFLKVSPLNFDFQYSKFVS 71
LEN Q IS IL YD++LR + + +TI F +S +N D+ + +++
Sbjct: 34 LENVTQTISRILDGYDIRLRPNFGGEPLLVGMDLTI-ASFDAISEVNMDYTITMYLN 89
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 161 NENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 103 NYNKKLYYNINYI 115
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 319 NNNNYKKLYYNINYI 333
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 319 NNYNNKKLYYNINYI 333
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 102 NYNNYKKLYYNINYI 116
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 102 NYNNYKKLYYNINYI 116
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 102 NYNNYKKLYYNINYI 116
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 102 NYNNYKKLYYNINYI 116
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 102 NYNNYKKLYYNINYI 116
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 102 NYNNYKKLYYNINYI 116
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 102 NYNNYKKLYYNINYI 116
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 102 NYNNYKKLYYNINYI 116
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 167 NENENVKMYYNI 132
N N N K+YYNI
Sbjct: 105 NNNYNKKLYYNI 116
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 167 NENENVKMYYNI 132
N N N K+YYNI
Sbjct: 105 NNNYNKKLYYNI 116
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 100 NYNNYKKLYYNINYI 114
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 167 NENENVKMYYNIPYV 123
N N K+YYNI Y+
Sbjct: 110 NYNNYKKLYYNINYI 124
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 167 NENENVKMYYNI 132
N N N K+YYNI
Sbjct: 325 NNNYNKKLYYNI 336
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = -2
Query: 148 KCITIFLMFLKVSPLNFDFQYSKFVSIGQQRKQMQKKCTTILNLKRL 8
+C +FL+ PL+ + ++F + R+ +TI +L +L
Sbjct: 700 RCTAVFLLMKTNPPLSMLQRMAEFTKLDTNRQVNSAVKSTIQSLMKL 746
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 7.0
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +3
Query: 267 YFYCLGVWTSSQPIWLL 317
Y C G+W P++L+
Sbjct: 216 YLVCYGIWVYFVPLFLI 232
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 7.0
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +3
Query: 267 YFYCLGVWTSSQPIWLL 317
Y C G+W P++L+
Sbjct: 92 YLVCYGIWVYFVPLFLI 108
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
Frame = -1
Query: 167 NENENVK-MYYNIPYV 123
N N N K +YYNI Y+
Sbjct: 343 NYNNNYKKLYYNINYI 358
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,627
Number of Sequences: 438
Number of extensions: 4408
Number of successful extensions: 42
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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