Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j11f
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 44 1e-04
02_05_0601 - 30278455-30278572,30280211-30280676,30280748-302809... 43 2e-04
06_03_0842 + 25307509-25308049,25308507-25308659,25308770-253089... 41 7e-04
02_01_0681 - 5059082-5059217,5059318-5059783,5059869-5060072,506... 41 7e-04
06_03_0915 - 25929433-25930893 40 0.002
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 39 0.004
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 38 0.006
01_06_1541 - 38127014-38128022,38128116-38128209,38128302-381285... 36 0.033
04_04_0819 - 28312667-28313219,28315157-28316430 33 0.23
01_06_1540 - 38111557-38111985,38112087-38112311,38112494-381128... 32 0.40
12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551 31 0.53
12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660 31 0.53
11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360 31 0.53
07_03_1583 - 27898375-27898436,27898455-27898539,27898621-278987... 31 0.93
04_04_1635 - 34943881-34945233,34945321-34945524 29 2.1
01_06_1194 - 35313132-35313154,35314462-35314604,35314751-353154... 29 2.1
01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708 29 2.8
04_04_1451 + 33695734-33695806,33695946-33696179,33696341-336964... 29 3.7
01_01_0738 + 5749067-5749435 29 3.7
04_04_0302 - 24255456-24255935,24256723-24257604 28 5.0
03_05_0965 + 29256733-29257066,29257276-29258120,29258270-29258284 28 5.0
02_01_0261 + 1731654-1732793 28 5.0
01_06_1195 - 35319709-35319887,35320001-35320397 28 5.0
12_01_0599 - 4892146-4893552 28 6.5
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309... 28 6.5
05_03_0652 + 16606987-16607443,16607542-16607652,16609317-16609411 28 6.5
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 28 6.5
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 28 6.5
06_03_0988 + 26642247-26642506,26642790-26642872,26643150-266432... 27 8.7
06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425... 27 8.7
03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,654... 27 8.7
02_05_0156 + 26341904-26342801,26343469-26344148 27 8.7
01_05_0586 + 23443371-23444645 27 8.7
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/81 (30%), Positives = 46/81 (56%)
Frame = +2
Query: 269 GSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQICVEAK 448
G++ +L + +G+GI+A+PA K GL G++ +LA + ++ +LV++S+ A
Sbjct: 33 GAVFNLSTTIVGAGIMALPATMKVLGLAPGLVAILLAALLTDASIELLVRSSR----AAG 88
Query: 449 RPSLSFAETCGAAFMYGPKRL 511
P S+ G AF + +RL
Sbjct: 89 AP--SYGAVMGDAFGWWGRRL 107
>02_05_0601 -
30278455-30278572,30280211-30280676,30280748-30280951,
30281065-30281220,30281336-30281738
Length = 448
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/74 (32%), Positives = 43/74 (58%)
Frame = +2
Query: 269 GSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQICVEAK 448
G++ +L + +G+GI+A+PA K GLV G+I +LA + ++ +LV+ S+ +
Sbjct: 40 GAVFNLSTTIVGAGIMALPATMKVLGLVPGLILVMLAAVLTDASIELLVRFSRAV----- 94
Query: 449 RPSLSFAETCGAAF 490
+ S+ E G AF
Sbjct: 95 -GATSYGEAMGDAF 107
>06_03_0842 +
25307509-25308049,25308507-25308659,25308770-25308973,
25309056-25309521,25309614-25309746
Length = 498
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/54 (29%), Positives = 35/54 (64%)
Frame = +2
Query: 269 GSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQ 430
G++ +L + +G+GI+A+PA+ K G++ G++ I+ + ++ +LV+ S Q
Sbjct: 86 GAVFNLSTTIVGAGIMALPASIKMLGIIPGILMIIVVALLTEASIDMLVRCSHQ 139
>02_01_0681 -
5059082-5059217,5059318-5059783,5059869-5060072,
5060163-5060315,5060849-5061269
Length = 459
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/54 (29%), Positives = 35/54 (64%)
Frame = +2
Query: 269 GSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQ 430
G++ +L + +G+GI+A+PA+ K G++ G++ IL + ++ +LV+ S +
Sbjct: 46 GAVFNLSTTIVGAGIMALPASIKMLGIIPGILMIILVALLTEASIDMLVRCSHE 99
>06_03_0915 - 25929433-25930893
Length = 486
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +2
Query: 272 SILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK 418
++ +L S +G+GI+A+PA K G+ G++ ++ G + T+ +LV+
Sbjct: 79 AVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVR 127
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +2
Query: 233 EHRNVQHPNTTLGSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHIL 412
E R P TLG+I+ S +G+G+L +P AF+ SG +AG +G AG + + +L
Sbjct: 11 EGRRGATPAQTLGNIV---VSIVGTGVLGLPYAFRTSGWLAGALGVAGAGAATFYCMLLL 67
Query: 413 V 415
+
Sbjct: 68 L 68
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 263 TLGSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILV 415
TLG+++ S +G+G+L +P AF+ +G VAG +G AG + + +LV
Sbjct: 33 TLGNVV---VSIVGTGVLGLPYAFRTAGWVAGSLGVAAAGCATLYCMLLLV 80
>01_06_1541 -
38127014-38128022,38128116-38128209,38128302-38128535,
38128643-38128744,38130893-38130956
Length = 500
Score = 35.5 bits (78), Expect = 0.033
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +2
Query: 92 MEKNKSQSVKVDNFSSTIGLAANPGFQSTLSIASKGLPQDDKPYNPFEHRNVQHPNTTLG 271
+EK + + V VD+ + AA +QS AS + ++P P + T
Sbjct: 3 VEKVERKEVAVDD-DGRVRTAALI-WQSLQCTASLLMFMLNQPGVPRDQEGKNVTRTVWT 60
Query: 272 SILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHIL 412
+ H + + +GSG+LA+P + G V G I ++ ++ +T +L
Sbjct: 61 ATTHAITAVIGSGVLALPWSVAQMGWVLGPIALVVCAYITYYTAVLL 107
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +2
Query: 299 LGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQICVEAKRPSLSFAETC 478
+GSG+L +P F +G VAG + + + H + +LV +++ + P ++
Sbjct: 49 VGSGVLGLPYTFSRTGWVAGSVLLLAVAALTFHCMMLLVACRRRLAYD--HPKIASFGDL 106
Query: 479 GAAFMYGP 502
GAA + GP
Sbjct: 107 GAA-VCGP 113
>01_06_1540 -
38111557-38111985,38112087-38112311,38112494-38112854,
38112965-38113058,38113136-38113369,38113891-38113945
Length = 465
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 248 QHPNTTLGSILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVC 391
+ T + H++ + +GSG+LA+ + G VAG + LAGF C
Sbjct: 16 ERTGTVWTATAHIVTAVIGSGVLALAWSVAQLGWVAGPLA--LAGFAC 61
>12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551
Length = 475
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 281 HLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK 418
H++ + +GSG+L++ A G VAG +L FV +T +L +
Sbjct: 44 HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAE 89
>12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660
Length = 475
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 281 HLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK 418
H++ + +GSG+L++ A G VAG +L FV +T +L +
Sbjct: 44 HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAE 89
>11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360
Length = 445
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 281 HLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHILVK 418
H++ + +GSG+L++ A G VAG +L FV +T +L +
Sbjct: 39 HIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAE 84
>07_03_1583 -
27898375-27898436,27898455-27898539,27898621-27898768,
27899009-27899028,27899135-27899236,27899743-27899812,
27899956-27900012,27902324-27902484,27902742-27902761,
27902997-27903069,27903077-27903169,27903456-27903496,
27903597-27903858
Length = 397
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 170 QSTLSIASKGLPQDDKPYNPFEHRNVQH-PNTTLGSILHLLKSCLGSGILAMPAAFKNSG 346
QS+ S + Q ++ ++ ++H P + SI + + +G+GILA+PA + +G
Sbjct: 58 QSSGSQQQQQNQQLERLFSNLNQATMKHEPGSVTSSIFLVAGTTVGAGILAIPAVTQEAG 117
Query: 347 LVAGVIGTI 373
+A + I
Sbjct: 118 FLASAVTCI 126
>04_04_1635 - 34943881-34945233,34945321-34945524
Length = 518
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 269 GSILHLLKSCLGSGILAMPAA--FKNSGLVAGVIGTILAGFVCTHTVHILVKTSQQICVE 442
G + LL S + +PAA F S A + G + T+H ++ E
Sbjct: 216 GLLCGLLASLASGASVTLPAAGRFSASTFWADMRGAGATWYTAVPTIHQIIIDRHTSKPE 275
Query: 443 AKRPSLSFAETCGAA 487
A+ P+L F +C A+
Sbjct: 276 AEYPALRFIRSCSAS 290
>01_06_1194 -
35313132-35313154,35314462-35314604,35314751-35315444,
35315746-35315895,35316011-35316419
Length = 472
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = +2
Query: 260 TTLGSILHLLKSCLGSGILAMPAAFKNSGL---VAGVIGTIL 376
+ LG++ ++ S +G+GI+++PAA + G+ VA V+G L
Sbjct: 41 SVLGAVFNVSTSVVGAGIMSIPAAMRVLGVAPTVALVVGVAL 82
>01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708
Length = 488
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 281 HLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHIL 412
H++ + +GSG+L++ A G VAG +L V +T +L
Sbjct: 51 HIITAVIGSGVLSLGWAIAQLGWVAGPAVMVLFSLVTYYTSSLL 94
>04_04_1451 +
33695734-33695806,33695946-33696179,33696341-33696434,
33696532-33696749,33696859-33696992,33697098-33697325,
33697417-33697845
Length = 469
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 275 ILHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFV 388
+ H++ + +G G+LA+ + G VAG I + FV
Sbjct: 31 VAHIITAVIGCGVLALSWSVAQLGWVAGPIAMVCFAFV 68
>01_01_0738 + 5749067-5749435
Length = 122
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 378 ARIVPMTPATRPEFLNAAGIASIP 307
A IVP TP +R F AGI S+P
Sbjct: 58 ATIVPATPLSRAAFSTHAGIISVP 81
>04_04_0302 - 24255456-24255935,24256723-24257604
Length = 453
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 466 C*NMWCCLYVRTQKITLLVRSNPKIRRLLALG 561
C ++ CC+ + Q + ++ SNP++ +L LG
Sbjct: 268 CLSIACCVNITDQGLKAVLESNPRLTKLSILG 299
>03_05_0965 + 29256733-29257066,29257276-29258120,29258270-29258284
Length = 397
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 41 IKCKTLLNVNFVQDKAIMEKNKSQSVKVDNFSSTIGLAANPGFQSTLSIASKGLPQDDK 217
I+C+T V D + ++ S D+ + L A+P S LSI G P DD+
Sbjct: 37 IRCETTAYVTLRADVEGLRRDDELSPFDDDGLKLLALVADPPRPSRLSIRLDGDPDDDE 95
>02_01_0261 + 1731654-1732793
Length = 379
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 364 WHYPSWFRLYTHCTYFGKNITANLR*SKEAFIEFC 468
WH WFR Y ++ T +L E +++FC
Sbjct: 345 WHTNCWFRAYRESLVRVESCTPDLPPDGEPYLQFC 379
>01_06_1195 - 35319709-35319887,35320001-35320397
Length = 191
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +2
Query: 251 HPNTTLGSILHLLKSCLGSGILAMPAAFKNSGLVAGVI 364
H + G++ ++ S +G+GI+++PAA + G++ ++
Sbjct: 31 HGASVSGAVFNVSTSIIGAGIMSIPAAMRVLGVLPALL 68
>12_01_0599 - 4892146-4893552
Length = 468
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 281 HLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHT 400
H++ + +GSG+L++P A G V G ++ G V T
Sbjct: 40 HIITAVIGSGVLSLPWATAQLGWVGGPAVMVVFGGVTYFT 79
>05_04_0148 -
18426903-18427106,18430516-18430594,18430752-18430935,
18431020-18431063,18432028-18432165,18432713-18434511
Length = 815
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = +1
Query: 277 SSSPEILSWLW----YTGDACCVQEFWSSRWCHWHYPS 378
SSS W W + D CC + +RWC H+ S
Sbjct: 596 SSSGSRRGWRWNGSGHVDDGCCGGKSEMARWCERHWSS 633
>05_03_0652 + 16606987-16607443,16607542-16607652,16609317-16609411
Length = 220
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 169 EPWIGSEPNCRRKVVHLN*LAFIFLHYGFI-LHKIHV 62
E W GS P R ++HL L+ F+ GF+ + K H+
Sbjct: 181 EFWRGSTPTVRYCIIHLFGLSCFFVFDGFLTVKKYHI 217
>04_04_1693 +
35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 179 LSIASKGLPQDDKPYNPFEHRNVQHPNTTLGSILHLLKSCLGSGILAMPAA 331
L + GLP+ +P N F R +Q +T + L C+ I+ MPAA
Sbjct: 165 LDVDVPGLPE--RPINVFMPRLLQFFQSTHAILRKLALGCINQYIVVMPAA 213
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 233 EHRNVQHPNTTLGSILHLLKSC 298
+HR+ PN +G +LH KSC
Sbjct: 622 QHRDTIPPNEVVGQLLHASKSC 643
>06_03_0988 +
26642247-26642506,26642790-26642872,26643150-26643238,
26643478-26643551,26643783-26643833,26644512-26644588,
26644694-26645313
Length = 417
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Frame = +2
Query: 302 GSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTV-----HILVKTSQQICVEAKRPSLSF 466
G + A PAA L G +G+I AGF+ + + + + E P+
Sbjct: 12 GGAVAAAPAAAPEDQLSCGELGSIAAGFLRRYPAPENAGGVTIAMATDAAAELADPARRT 71
Query: 467 AETCG-AAFMYGPKRLRSWSG 526
AET G +Y W+G
Sbjct: 72 AETFGQRTSIYRGVTRHRWTG 92
>06_03_0442 +
20837492-20837621,20841842-20842075,20842435-20842528,
20842653-20842870,20842956-20843095,20843231-20843878
Length = 487
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 281 HLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHTVHIL 412
H++ + +GSG+L++ A G V G + +L + +T +L
Sbjct: 52 HIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFALITYYTSGLL 95
>03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,
6541815-6543215,6543268-6543357,6543800-6544515,
6545549-6545707,6545877-6546186,6546794-6546861,
6547354-6547896
Length = 1247
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 398 TVHILVKTSQQICVEAKRPSLSFAETCGAAFMYGPKRLRSWSGAIQKFVDYSLSVTYL 571
T+H LV + + + R SLSF E F+Y L + A K VDY + V ++
Sbjct: 1006 TLHTLVSPEEDANLTSNRKSLSFVER--RRFLY----LSKIAAAAGKDVDYEVKVAHI 1057
>02_05_0156 + 26341904-26342801,26343469-26344148
Length = 525
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 281 HLLKSCLGSGILAMPAAFKNSGL--VAGVIGTILAGFVCTH 397
+L ++ +G +++ +A S L V G+IG ILAGF+ H
Sbjct: 295 YLSQTAIGGKEMSVTSAGYLSALFDVGGIIGGILAGFISDH 335
>01_05_0586 + 23443371-23444645
Length = 424
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 278 LHLLKSCLGSGILAMPAAFKNSGLVAGVIGTILAGFVCTHT 400
L+L + G G+L+MP A G ++ ++ +L G VC +T
Sbjct: 44 LNLTNAVSGIGVLSMPYAVSQGGWLS-LLLFVLVGAVCYYT 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,044,300
Number of Sequences: 37544
Number of extensions: 339118
Number of successful extensions: 967
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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