Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j10r
(740 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 394 e-111
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 283 2e-77
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 281 7e-77
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 260 1e-70
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 252 4e-68
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 247 1e-66
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 200 2e-52
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 185 7e-48
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 175 5e-45
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 174 1e-44
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 168 6e-43
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 158 9e-40
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 153 2e-38
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 151 1e-37
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 138 8e-34
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 134 1e-32
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 126 3e-30
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 123 3e-29
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 116 3e-27
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 113 3e-26
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 61 2e-10
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 40 5e-04
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 36 0.006
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.008
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 33 0.043
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 32 0.075
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 31 0.13
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 31 0.23
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 30 0.30
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 29 0.70
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.70
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.92
SPAC823.13c |||mitochondrial inner membrane protein|Schizosaccha... 29 0.92
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.92
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 1.2
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 28 1.2
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.2
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 28 1.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 1.6
SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A |S... 27 2.1
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 27 2.1
SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces p... 27 2.1
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 27 2.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 3.7
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 6.5
SPBC1921.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 8.6
SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces p... 25 8.6
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 25 8.6
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 25 8.6
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 394 bits (971), Expect = e-111
Identities = 189/246 (76%), Positives = 213/246 (86%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+EL EA+VLPM +KF LG+ PPKG L++GPPGTGKTLLARACAAQ+ +TFLKLA
Sbjct: 193 QIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAA 252
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
PQLVQMFIGDGAKLVRDAFALAKEK+PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL
Sbjct: 253 PQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 312
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
LNQLDGFSS +KVIAATNRVD LDPALLRSGRLDRK+EFP PNEEAR I++IHSRKM
Sbjct: 313 LNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKM 372
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKKA 21
+ D+N+EEL+RSTD++NGA K+VCVEAGMIALR+ T + HE FMD ILEVQ +K
Sbjct: 373 AIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432
Query: 20 NLSYYA 3
L Y+A
Sbjct: 433 TLQYFA 438
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 283 bits (694), Expect = 2e-77
Identities = 136/238 (57%), Positives = 180/238 (75%), Gaps = 1/238 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+E+ E + LP+ H E F +LGI PKG+LLYGPPGTGKTLLARA A T F++++G
Sbjct: 153 QIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSG 212
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEK-AGDREVQRTMLE 384
+LVQ +IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R DS +GD EVQRTMLE
Sbjct: 213 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLE 272
Query: 383 LLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
LLNQLDGF +T +IKVI ATNR+DILDPALLR GR+DRKIEFP P+ EARA I++IHSR
Sbjct: 273 LLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRS 332
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAK 30
MN++ ++ + ++ + +GA+ K VC EAGM ALR VT EDF A+ +V K
Sbjct: 333 MNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNK 390
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 281 bits (689), Expect = 7e-77
Identities = 133/231 (57%), Positives = 174/231 (75%), Gaps = 1/231 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QIQE+ EAV LP+TH E + +GI PPKGV+LYG PGTGKTLLA+A A QT +TFL++ G
Sbjct: 199 QIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVG 258
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+L+Q ++GDG +LVR F A+E +P+I+FIDE+DAIGTKR+D++ +RE+QRTMLEL
Sbjct: 259 SELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLEL 318
Query: 380 LNQLDGF-SSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
LNQLDGF +S DIKVI ATNR+ LDPAL+R GR+DRKI F +P+E + +I IH+ K
Sbjct: 319 LNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSK 378
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDA 51
MN+ DVN EEL + DD +GA+ KA+ EAG++ALR V +DF A
Sbjct: 379 MNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQA 429
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 260 bits (638), Expect = 1e-70
Identities = 121/234 (51%), Positives = 166/234 (70%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+ L E V LP+ E+FV LGI PPKG++LYGPPGTGKTL ARA A +T +TF+++ G
Sbjct: 187 QIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIG 246
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+LVQ ++G+GA++VR+ F +A+ K IIF DE+DAIG RFD GD EVQRTMLEL
Sbjct: 247 SELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLEL 306
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
+ QLDGF +IKV+ ATNR + LD AL+R GR+DRK+EF P+ E RA I++IH++ M
Sbjct: 307 ITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSM 366
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEV 39
+ D+ +E ++R GA+ ++VC EAGM A+R T +DF+DA+ +V
Sbjct: 367 AIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKV 420
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 252 bits (617), Expect = 4e-68
Identities = 122/239 (51%), Positives = 159/239 (66%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+EL E + LP+ + E F+ +GI PPKGVLLYGPPGTGKTLLARA AA FLK+
Sbjct: 140 QIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVS 199
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+V +IG+ A+++R+ F AKE P +IF+DE+DAIG +RF + DRE+QRT++EL
Sbjct: 200 SAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 259
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
LNQ+DGF K+I ATNR D LDPALLR GRLDRKIE P PNE R I++IH K+
Sbjct: 260 LNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKV 319
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKK 24
+ ++++E L + TD NGA + V EAG IA++ V D M A +V KK
Sbjct: 320 SKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKK 378
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 247 bits (604), Expect = 1e-66
Identities = 120/247 (48%), Positives = 169/247 (68%), Gaps = 1/247 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
Q QE+ EAV LP+T + + +GI PP+GVLLYGPPGTGKT+L +A A T + F+++ G
Sbjct: 142 QKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVG 201
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+ VQ ++G+G ++VRD F +A+E APAIIFIDE+DAI TKRFD++ DREVQR ++EL
Sbjct: 202 SEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIEL 261
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFP-HPNEEARARIMQIHSRK 204
L Q+DGF A++KVI ATNR D LDPALLR GRLDRKIEFP + + R + Q + K
Sbjct: 262 LTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAK 321
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKK 24
M +SP+V+ + D +GAQ A+ +AG++A+R+S + D +A +A K
Sbjct: 322 MLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAY--ARAVKP 379
Query: 23 ANLSYYA 3
++ +A
Sbjct: 380 TDMEQFA 386
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 200 bits (487), Expect = 2e-52
Identities = 102/247 (41%), Positives = 153/247 (61%), Gaps = 3/247 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
Q+L E+V P+TH E F LG+ PPKGVLLYGPPG KT+ A+A A +T F+ + GP+
Sbjct: 558 QKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPE 617
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
L F+G+ + VR F A++ +P++IF DE+DA+ R + D R + LLN
Sbjct: 618 LFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGE-----DNSSDRVVAALLN 672
Query: 374 QLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNV 195
+LDG + ++ V+AATNR D++DPAL+R GRLDR + PN EAR +I++I + KM
Sbjct: 673 ELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKF 732
Query: 194 SPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRR--SATAVTHEDFMDAILEV-QAKKK 24
+ DV+ + ++ T+ +GA+ A+C EAG+IA+ A + F A+L + +A +
Sbjct: 733 AEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQAHFKTALLALRKAITR 792
Query: 23 ANLSYYA 3
L YYA
Sbjct: 793 DMLEYYA 799
Score = 153 bits (371), Expect = 3e-38
Identities = 90/236 (38%), Positives = 134/236 (56%), Gaps = 1/236 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI ++ + V LP + E F I PP+GVLLYGPPGTGKT++ RA AA+ + + G
Sbjct: 287 QIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDG 346
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
P +V ++G+ +R F A+ P+IIFIDE+DA+ KR +E + E R + L
Sbjct: 347 PSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKR--TEDVSEAE-SRAVATL 403
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ-IHSRK 204
L LDG ++ + VIAATNR + +D AL R GRL+++IE P++ AR I++ + S
Sbjct: 404 LTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGV 463
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQ 36
N D E+L+ T + GA AV EA + A++R+ + +D VQ
Sbjct: 464 PNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTSGLDIFGAVQ 519
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 185 bits (450), Expect = 7e-48
Identities = 92/231 (39%), Positives = 147/231 (63%), Gaps = 1/231 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+EL+E LP+ H + F ++GI PP+G+L+YGPPGTGKTL+ARA A +T + F + G
Sbjct: 235 QIRELVE---LPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLING 291
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
P+++ G+ +R AF A++ +PAIIFIDE+D+I KR EK +R + +L
Sbjct: 292 PEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR---EKTNGEVERRVVSQL 348
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
L +DG + +++ V+AATNR + +DPAL R GR DR+++ P+ R I++IH++ M
Sbjct: 349 LTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNM 408
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAV-THEDFMDA 51
++ DV+ E+++ T + G+ ++C EA M +R + ED +DA
Sbjct: 409 KLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDA 459
Score = 180 bits (439), Expect = 1e-46
Identities = 93/217 (42%), Positives = 137/217 (63%), Gaps = 1/217 (0%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+EL E V +P+ + EKF+ G+ P KGVL +GPPGTGKTLLA+A A + + F+ + GP+
Sbjct: 507 RELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPE 566
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR-EVQRTMLELL 378
L+ M+ G+ VRD F A+ AP ++F+DELD+I R AGD R + +LL
Sbjct: 567 LLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKAR--GASAGDSGGGDRVVNQLL 624
Query: 377 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 198
++DG +S ++ VI ATNR D +DPAL+R GRLD+ I P P+EEAR I+Q R
Sbjct: 625 TEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTP 684
Query: 197 VSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRS 87
V+ DV+ ++++T F+GA + V A +A++ S
Sbjct: 685 VAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDS 721
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 175 bits (426), Expect = 5e-45
Identities = 96/237 (40%), Positives = 141/237 (59%), Gaps = 3/237 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+E++E V + + + + LG P+G +L GPPGTGKTLLA+A A + FL ++G +
Sbjct: 306 EEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSE 364
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR-EVQRTMLELL 378
++MF+G G VRD FA A++ AP IIFIDE+DAIG R + G E + T+ +LL
Sbjct: 365 FLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLL 424
Query: 377 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 198
++DGF+S+ I V A TNR D+LDPALLR GR DR+I P+ R +I ++H + +
Sbjct: 425 VEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIK 484
Query: 197 VSPDVNF--EELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQA 33
+ +++ + L+ T F GA VC E +IA R ++ V F AI V A
Sbjct: 485 AADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTA 541
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 174 bits (424), Expect = 1e-44
Identities = 88/218 (40%), Positives = 136/218 (62%), Gaps = 2/218 (0%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
I EL+E V +P+ H E + GIHPP+GVLL+GPPG GKT+LA A A + F+ ++ P
Sbjct: 183 INELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAP 242
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 378
+V G+ K VR+ F AK AP ++FIDE+DA+ KR +++ +R + L +
Sbjct: 243 SIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCM 302
Query: 377 NQLDGFSST--ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
++L F T + VI ATNR D LD AL R+GR DR+I P+++AR +I++ ++
Sbjct: 303 DEL-SFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKG 361
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRR 90
+ +S D +F +L++ T + GA KA+ AG+IA++R
Sbjct: 362 LKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKR 399
Score = 168 bits (408), Expect = 8e-43
Identities = 89/220 (40%), Positives = 133/220 (60%), Gaps = 2/220 (0%)
Frame = -1
Query: 731 ELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQL 552
EL A+V P+ E + ++GI P GVLL+GPPG GKTLLA+A A ++K+ F+ + GP+L
Sbjct: 503 ELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPEL 562
Query: 551 VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 372
+ ++G+ + VR F A+ +P +IF DELDA+ +R DS V T LL +
Sbjct: 563 LNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSRVVNT---LLTE 619
Query: 371 LDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVS 192
LDG S + + VIAATNR DI+DPA+LR GRLD+ + P+ R I++ +++ +
Sbjct: 620 LDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLH 679
Query: 191 PDVNFEELSRS--TDDFNGAQCKAVCVEAGMIALRRSATA 78
+VN + L R +F+GA A+ EA + ALR + A
Sbjct: 680 EEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFA 719
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 168 bits (409), Expect = 6e-43
Identities = 101/247 (40%), Positives = 142/247 (57%), Gaps = 7/247 (2%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
+ +E +E +V + F LG P+GVLL GPPGTGKT+LARA A + F ++G
Sbjct: 274 EAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSG 333
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
Q +M++G GAK VR+ FA A+++AP+IIFIDELDAIG KR + A +++T+ +L
Sbjct: 334 SQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAA---HMRQTLNQL 390
Query: 380 LNQLDGFSSTAD----IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 213
L LDGFS D + I ATN + LDPAL R GR DR I P P+ R I+ H
Sbjct: 391 LVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQH 450
Query: 212 SRKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDF---MDAILE 42
+R + + DV+ ++R T F GA + +A + A + +TAV+ D D IL
Sbjct: 451 TRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDLEWSKDRILM 510
Query: 41 VQAKKKA 21
+K A
Sbjct: 511 GAERKSA 517
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 158 bits (383), Expect = 9e-40
Identities = 87/223 (39%), Positives = 130/223 (58%), Gaps = 6/223 (2%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAA-----QTKSTFL 573
I +L E V+LP+ + E F++L I PP+GVL +GPPGTGKTL+AR AA K +F
Sbjct: 381 ILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFF 440
Query: 572 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 393
G + ++G+ + +R F A+ P+IIF DE+D + R ++ + T
Sbjct: 441 LRKGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVST 500
Query: 392 MLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 213
+L L +DG + + VI ATNR + LDPAL R GR DR+ FP PN++AR +I++I+
Sbjct: 501 LLAL---MDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEIN 557
Query: 212 SRKMNVS-PDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRS 87
S + P+ L+ ST + GA KA+C EA + A+RR+
Sbjct: 558 SLHFSPKIPESYLLHLAESTSGYGGADLKALCTEAALNAVRRT 600
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 153 bits (372), Expect = 2e-38
Identities = 82/223 (36%), Positives = 127/223 (56%), Gaps = 6/223 (2%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKS-----TFL 573
I +L E V+LP+ + E F + PP+GVL +GPPGTGKTL+ARA AA S +F
Sbjct: 275 INQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFY 334
Query: 572 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 393
G + ++G+ + +R F AK P+IIF DE+D + R ++ + T
Sbjct: 335 MRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVST 394
Query: 392 MLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 213
+L L+ DG S + +I ATNR D +DPAL R GR DR+ FP P+ +AR +I++IH
Sbjct: 395 LLALM---DGMESRGQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIH 451
Query: 212 SRKMNVS-PDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRS 87
+R + P+ L+ + + GA +A+C EA + +++R+
Sbjct: 452 TRNWDPPVPEWLCSMLAEKSKGYGGADLRALCTEAALNSIKRT 494
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 151 bits (366), Expect = 1e-37
Identities = 80/222 (36%), Positives = 135/222 (60%), Gaps = 4/222 (1%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 549
L + + LP+ E F + G+ P GVLLYGPPGTGKTLLA+A A + F+ + GP+L+
Sbjct: 667 LRDTLQLPLQFPELF-SQGLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELL 725
Query: 548 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 369
M++G+ VR+ F A+ +P +IF DELD+I R +S +G+ + R + +LL +L
Sbjct: 726 NMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGN-VMDRVVSQLLAEL 784
Query: 368 DGFSSTAD--IKVIAATNRVDILDPALLRSGRLDRKIEFP-HPNEEARARIMQIHSRKMN 198
D S + + VI ATNR D+LDP+LLR GR D+ + + +EE++A +++ ++
Sbjct: 785 DSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLRALTKTFK 844
Query: 197 VSPDVNFEELSRST-DDFNGAQCKAVCVEAGMIALRRSATAV 75
+ ++ E++++ +F GA A+C +A + A++R +
Sbjct: 845 LDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEI 886
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 138 bits (334), Expect = 8e-34
Identities = 82/229 (35%), Positives = 133/229 (58%), Gaps = 2/229 (0%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+ L E V+LP+ + F + G P G+LLYGPPGTGK+ LA+A A + STF ++
Sbjct: 139 EALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSSD 197
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
LV ++G+ +LVR F +A+E+ P+IIFIDE+D++ R + E R ++ E L
Sbjct: 198 LVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSRRIK---TEFLV 254
Query: 374 QLDGF-SSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM- 201
Q++G + + V+ ATN LD A+ R R +++I P PN ARAR+ +++ K+
Sbjct: 255 QMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIP 312
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMD 54
+ +F+EL++ TD ++G+ V +A M +RR TA ++ D
Sbjct: 313 SELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRRIHTATHFKEVYD 361
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 134 bits (324), Expect = 1e-32
Identities = 81/251 (32%), Positives = 133/251 (52%), Gaps = 6/251 (2%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
++++IE+ P+ + + + P G+LL+G PG GKT LA A ++ F+ + GP
Sbjct: 618 VRDIIES---PVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGP 674
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRF-DSEKAGDREVQRTMLEL 381
+L+ +IG + VRD F+ A+ P ++F DE D++ +R DS DR V ++
Sbjct: 675 ELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTGVTDRVVN----QI 730
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
L Q+DG S + ++AAT R D++DPALLR GRLD+ I PNEE R ++Q + +
Sbjct: 731 LTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRF 790
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIAL-----RRSATAVTHEDFMDAILEVQ 36
++ ++LS TD + A ++ +A +IA+ R S AV + +
Sbjct: 791 HIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVSINAVDPSQTTSSFTNLT 850
Query: 35 AKKKANLSYYA 3
+ K N S A
Sbjct: 851 TESKRNASMLA 861
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 126 bits (304), Expect = 3e-30
Identities = 82/210 (39%), Positives = 117/210 (55%), Gaps = 14/210 (6%)
Frame = -1
Query: 677 LGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA-GPQLVQMFIGDGAKLVRDAFA 501
LGI+ KG+LLYGPPGTGKTL+AR + K+ GP+++ ++G + VR FA
Sbjct: 299 LGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVRKLFA 358
Query: 500 LAK--------EKAPAIIFIDELDAIGTKRFDSEKAGDREV-QRTMLELLNQLDGFSSTA 348
A+ E II DELDAI KR S GD V + + +LL ++DG
Sbjct: 359 DAEREYRDRGEESGLHIIIFDELDAICKKRGSS--GGDTGVGDQVVNQLLAKMDGVDQLN 416
Query: 347 DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN----VSPDVN 180
+I VI TNR D++D ALLR GRL+ +E P+E R +I++IH+ +M + DV+
Sbjct: 417 NILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVD 476
Query: 179 FEELSRSTDDFNGAQCKAVCVEAGMIALRR 90
EEL+ T +F+GA+ + A A R
Sbjct: 477 MEELASLTKNFSGAEIAGLIKSASSFAFYR 506
Score = 32.3 bits (70), Expect = 0.075
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ-LVQMFIGDGAKLVRDAFALAKEKAPA 477
VLL GP +GKT LA A ++ F+KL + +V M V F + + +
Sbjct: 588 VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNENARVAHVNRVFEDSYKSPLS 647
Query: 476 IIFIDELDAI 447
+I +DE++ I
Sbjct: 648 VIVVDEIERI 657
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 123 bits (296), Expect = 3e-29
Identities = 73/233 (31%), Positives = 130/233 (55%), Gaps = 3/233 (1%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLG--IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 564
+ +L++ V+ P+ + E F G + PKG+LLYGPPG GKT+LA+A A Q+++TF+ ++
Sbjct: 98 VNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVS 157
Query: 563 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 384
L + G+ KLV F LA++ P IIFIDE+D +R ++ + + E
Sbjct: 158 VGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQR---QRTDHEAMAQIKAE 214
Query: 383 LLNQLDG-FSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 207
++ DG S + + V+ ATNR +D A+ R R+ + P PN E R +I++++ +
Sbjct: 215 FMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR--RMPKVFSIPLPNAEQRRKILELYLK 272
Query: 206 KMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
K+ + + ++ + +T +G+ K VC A +++ R H + ++AI
Sbjct: 273 KVPLEANFDWNGVVNATAGLSGSYIKEVCRSA--LSVPRRELFDKHGNDLEAI 323
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 116 bits (280), Expect = 3e-27
Identities = 77/228 (33%), Positives = 120/228 (52%), Gaps = 10/228 (4%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 549
L EAV+ P E F L P +G+LL+GPPGTGKT+LARA A + K+TF ++ L
Sbjct: 391 LKEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLT 449
Query: 548 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 369
++GD KLVR F +AK + ++IF+DE+D+I + R DS + +R E L Q
Sbjct: 450 SKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARNDSGNEHESS-RRLKTEFLIQW 508
Query: 368 DGFSSTADIK---------VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR-IMQ 219
++ A K V+AATN +D A R R ++ P P +E R + +
Sbjct: 509 SSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLSH 566
Query: 218 IHSRKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAV 75
+ +++ + + EEL T+ ++G+ A+ +A M LR A+
Sbjct: 567 LLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGPLRNLGDAL 614
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 113 bits (271), Expect = 3e-26
Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 12/224 (5%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 549
L EAVV P + F L P +G+LL+GPPGTGKT+LARA A +++S F ++ L
Sbjct: 471 LKEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLT 529
Query: 548 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM-LELLNQ 372
F+G+ KLVR F LAK+ +P+IIF+DE+D++ + R S + E R + E L Q
Sbjct: 530 SKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQ 587
Query: 371 LDGFS------STAD---IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ 219
+ TAD + V+AATN +D A R R R+ P P+E R +
Sbjct: 588 WSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLN 645
Query: 218 --IHSRKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 93
+ +K ++S + + E + ++T+ ++G+ A+ +A M LR
Sbjct: 646 NLLKYQKHSLSLE-DIEAIVKATEYYSGSDLTALAKDAAMGPLR 688
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 60.9 bits (141), Expect = 2e-10
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
Frame = -1
Query: 674 GIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALA 495
GI +G LLYGPPG+GKT A A + L L + + D R L+
Sbjct: 238 GIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVL---NLAEKGLTDD----RLNHLLS 290
Query: 494 KEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRV 315
A++ ++++D+ R S + G T LLN LDG +S+ + + TN
Sbjct: 291 NVPPKAVVLLEDVDSAFQGRERSGEVGFH-ANVTFSGLLNALDGVTSSDERIIFMTTNHP 349
Query: 314 DILDPALLRSGRLDRKIEFPHPN-EEARARIMQIHSRKMNVSPDVN 180
+ LDPAL+R GR+D K + E+ R + + ++ D++
Sbjct: 350 EKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSPEMADDLS 395
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 39.5 bits (88), Expect = 5e-04
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDA-FALAKEKAPA 477
++L+G GTGKT LAR A TKS F++++ + D K+ D+ L
Sbjct: 123 MILWGSAGTGKTTLARLIAVTTKSRFIEISATSTT---VADCRKIFEDSQNYLTLTGRKT 179
Query: 476 IIFIDEL 456
IIF+DE+
Sbjct: 180 IIFLDEV 186
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 35.9 bits (79), Expect = 0.006
Identities = 47/188 (25%), Positives = 72/188 (38%), Gaps = 3/188 (1%)
Frame = -1
Query: 692 EKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGD--GAKL 519
EKF++ P +L YGPPGTGKT ACA + + QL+++ D G
Sbjct: 48 EKFISSNRVPH--MLFYGPPGTGKTSTILACARKIYGPNYR---NQLMELNASDDRGIDA 102
Query: 518 VRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIK 339
VR+ + + IF I D+ + R ++E T +++
Sbjct: 103 VRE--QIKNFASTRQIFASTFKMIILDEADAMTLAAQNALRRVIE--------KYTKNVR 152
Query: 338 VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ-IHSRKMNVSPDVNFEELSR 162
N ++ + PA+ R R P P +E + I S N+ PD L
Sbjct: 153 FCIICNYINKISPAI--QSRCTRFRFQPLPPKEIEKTVDHVIQSEHCNIDPDAKMAVLRL 210
Query: 161 STDDFNGA 138
S D A
Sbjct: 211 SKGDMRKA 218
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 35.5 bits (78), Expect = 0.008
Identities = 36/147 (24%), Positives = 62/147 (42%)
Frame = +1
Query: 97 SAIIPASTQTALHWAPLKSSVERDSSSKLTSGLTFILREWICIILARASSLG*GNSIFRS 276
S+ P+S+ ++ +P SS + SSSK +S + + + SS +S S
Sbjct: 150 SSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSS 209
Query: 277 KRPDLSRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIVRCTSRSPAFSESKRFVPIAS 456
P S++ SK S+ T A + + +N+ S A S + + S
Sbjct: 210 ASPSSSKSSSKFSSSSFITST-TPASSSSSGAIVSNAKTASTDDSSSASSATSSVSSVVS 268
Query: 457 SSSMKMIAGAFSLANAKASRTSLAPSP 537
S+S + A A S + + +S S SP
Sbjct: 269 SASSALSASASSASASVSSSASSDASP 295
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +1
Query: 364 PSSWFNNSNIVRCTSRSPAFSESKRFVPIASSSSMKMIAGAFSLANAKASRTSLAPSPMN 543
PSS ++S+ +S S + S SK +SSSS K + + S + + +S +S + S +
Sbjct: 154 PSSSSSSSSSSPSSSSSKSSSSSKS--SSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSAS 211
Query: 544 ICTSCGPASFKNVDFV 591
+S + F + F+
Sbjct: 212 PSSSKSSSKFSSSSFI 227
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 33.1 bits (72), Expect = 0.043
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Frame = +1
Query: 46 SMASIKSS*VTAVAERRSAIIPASTQTALHWAPLKSS--VERDSSSKL-TSGLTFILREW 216
S + SS T+++ S+ IPAS+ +A L SS + SSS L +S T I
Sbjct: 2 SFTNNTSSVDTSLSSSASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSS 61
Query: 217 ICIILARASSLG*GNSIFRSKRPDLSRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIV 396
L+ +S +S F + L + S+ S+ A++T S+ L SS S
Sbjct: 62 SSSPLSSSSFTSPASSSFIT---SLVSSSSQQSSSSSASLTSSSSATLTSSS----SASP 114
Query: 397 RCTSRSPAFSESKRFVPIASSSSMKMIAGAFSLANAKASRTS 522
+S S A S S + +ASSSS M + + S +++ S +S
Sbjct: 115 TSSSSSHALSSSSSSL-VASSSSSGMSSSSLSHSSSVPSSSS 155
Score = 25.4 bits (53), Expect = 8.6
Identities = 39/172 (22%), Positives = 77/172 (44%)
Frame = +1
Query: 40 TSSMASIKSS*VTAVAERRSAIIPASTQTALHWAPLKSSVERDSSSKLTSGLTFILREWI 219
+SS+ + SS + + S++IP+S+ + L + + SSS L+S
Sbjct: 19 SSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSS--------- 69
Query: 220 CIILARASSLG*GNSIFRSKRPDLSRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIVR 399
+ ASS + + S + S + S S+ ++ TL S+ +P+S ++S+ +
Sbjct: 70 -SFTSPASSSFITSLVSSSSQQSSSSSASLTSS---SSATLTSSSSASPTS-SSSSHALS 124
Query: 400 CTSRSPAFSESKRFVPIASSSSMKMIAGAFSLANAKASRTSLAPSPMNICTS 555
+S S S S + +S S + + S ++ + TS S +I +S
Sbjct: 125 SSSSSLVASSSSSGMSSSSLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVSS 176
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 32.3 bits (70), Expect = 0.075
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 665 PPKGVLLYGPPGTGKTLLARACAAQ-TKSTFLKLAGP 558
PP V + GPPGTGK+ L ++ + +K T ++ GP
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITGP 109
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 31.5 bits (68), Expect = 0.13
Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM---------FIGDGAKLVRDA 507
K + L GPPG GKT + ++ A+ F + + L + +IG + A
Sbjct: 572 KIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPGKIVQA 631
Query: 506 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV---QRTMLELLNQLDGFSSTADIKV 336
+ + P +I IDE+D +G + E+ ++ L +D + +
Sbjct: 632 LKKVQTENP-LILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLDVSSVLF 690
Query: 335 IAATNRVDILDPALL 291
+ N +D + P LL
Sbjct: 691 VCTANTIDTIPPPLL 705
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 30.7 bits (66), Expect = 0.23
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -1
Query: 629 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELD 453
+GK + A A Q K+ FL + FIG G LV K ++ A + D LD
Sbjct: 275 SGKRVSVSAAAQQHKNLFLPYLPQASLPKFIGTGKLLVGTLHINRKNRSDAYVITDVLD 333
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 30.3 bits (65), Expect = 0.30
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Frame = -1
Query: 677 LGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKL-AGPQLVQMFIGDGAKLVRDAFA 501
LG++ K VLL GPPG GKT A A L+L A + + + V D+ +
Sbjct: 406 LGLY--KAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKRLLDEQLFGVTDSQS 463
Query: 500 LA---KEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIA 330
LA KA + + D +GDR + QL+ + I +I
Sbjct: 464 LAGYFGTKANPVDMAKSRLVLIMDEIDGMSSGDRGG-------VGQLNMIIKKSMIPIIC 516
Query: 329 ATNRVDILDPALLRSGRLDRKIEFPHPNEEA-RARIMQIHSRK-MNVSP 189
N D P L R + F P+ + R+RIM I R+ + +SP
Sbjct: 517 ICN--DRAHPKLRPLDRTTFDLRFRRPDANSMRSRIMSIAYREGLKLSP 563
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 29.1 bits (62), Expect = 0.70
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQ--TKSTFLKLAGPQL 552
KGVL G GTGKT LA A A + K F + G ++
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEV 102
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.70
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 298 AGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIVRCTS--RSPAFSESKRFVPIASSSSMK 471
+ S S+ +A+ + S +P+S S+ +S S S S I SSS
Sbjct: 82 SSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLAS 141
Query: 472 MIAGAFSLANAKASRTSLAPSPMNICTSCGPAS 570
+ SLA++ + +SLA S N TS P S
Sbjct: 142 SSITSSSLASSSTTSSSLASSSTNSTTSATPTS 174
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 454 SSSSMKMIAGAFSLANAKASRTSLAPSPMNICTSCGPASFKNVDFV*AAQALASN 618
SS+S + + + +++ S +SLA S N TS P S + +LAS+
Sbjct: 68 SSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASS 122
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 0.92
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Frame = +1
Query: 40 TSSMASIKSS*VTAVAERRSAIIPASTQTALHWAPLKSSVERDSSSKLTSGLTFILREWI 219
+SS +S SS +T+ + S+I S+ ++ + L SS ++S +S + I
Sbjct: 219 SSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSS 278
Query: 220 CIILARASSLG*GNSIFRSKRP---------DLSRAGSKMSTLLVAAMTLMSAVELNPSS 372
++S +S S P S + S STL ++M+ S+ +P+S
Sbjct: 279 SSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTS 338
Query: 373 WFNNSNIVRCTSRSPAFSESKRFVPIASSSSMKMIAGAFSLANAKASRTSLAPSPMNICT 552
+S+ + +S SP+ S +S++S + +FS + +S TS + + +
Sbjct: 339 ---SSSTISSSSSSPSSSS------FSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSS 389
Query: 553 SCGPAS 570
S PAS
Sbjct: 390 SSRPAS 395
>SPAC823.13c |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 28.7 bits (61), Expect = 0.92
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Frame = -1
Query: 416 GDREVQRTMLEL---LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPN 246
G+ VQ+T+L+ LN+L G+SS +K + D L + R IE
Sbjct: 23 GNGSVQQTILQASQRLNELTGYSSIEALKNAVVKQETKLRDFRLSAAEARKRYIEAVEKR 82
Query: 245 EEARARIMQIHSRKMNVSPDVNFEELSR-STDDFNGAQCKAVCVEAGMIALRR 90
++ + ++ R+ + S ++ E ++ DD++ + + E +A RR
Sbjct: 83 SSSQREVNELLQRRSSWS-TIDLERFTKLYRDDYSNKEEEIKAQEDVDVAERR 134
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 28.7 bits (61), Expect = 0.92
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 665 PPKGVLLYGPPGTGKTLLARACAA 594
P L GP GTGKTLL +A A+
Sbjct: 613 PIASFLFCGPSGTGKTLLTKALAS 636
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTFLKL 567
K +LL G PG GKT L A A +T +++
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = -1
Query: 557 QLVQMFIGDG-AKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
Q+ ++ +GDG A+ + D +A +I E DA+G FD AGD V+ L
Sbjct: 267 QIAKIPLGDGTAEALYDTYAGVYITGISISGYVE-DAVGYYSFDFTTAGDTSVEPLFFLL 325
Query: 380 LNQLD-GFSSTADIKVIAAT 324
+Q+D S T ++ A+
Sbjct: 326 PHQVDTAVSGTKVTSIVLAS 345
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 1.2
Identities = 37/160 (23%), Positives = 71/160 (44%)
Frame = +1
Query: 55 SIKSS*VTAVAERRSAIIPASTQTALHWAPLKSSVERDSSSKLTSGLTFILREWICIILA 234
++ SS V++ S+ P+S+ T +P SS SSS +S + +
Sbjct: 126 TVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSS-----------S 174
Query: 235 RASSLG*GNSIFRSKRPDLSRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIVRCTSRS 414
+SS +S S S + S S+ +++ + S+ + SS ++S+ +SR
Sbjct: 175 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRP 234
Query: 415 PAFSESKRFVPIASSSSMKMIAGAFSLANAKASRTSLAPS 534
S S F+ SSS+ + + +++ +S +S PS
Sbjct: 235 ---SSSSSFITTMSSSTF-ISTVTVTPSSSSSSTSSEVPS 270
Score = 25.4 bits (53), Expect = 8.6
Identities = 23/105 (21%), Positives = 49/105 (46%)
Frame = +1
Query: 256 GNSIFRSKRPDLSRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIVRCTSRSPAFSESK 435
GN + ++ S + + S+ + + + +PSS ++S+ +S S + S S
Sbjct: 119 GNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSS---SSSSSSSSSSSS 175
Query: 436 RFVPIASSSSMKMIAGAFSLANAKASRTSLAPSPMNICTSCGPAS 570
+SSSS + + S +++ +S +S + P+ TS +S
Sbjct: 176 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSS 220
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 689 KFVNLGIHPPKGVLLYGPPGTGKTLLARACA 597
K + G + +L+ GPP TGKT +A A
Sbjct: 56 KMIQEGRIAGRAILMAGPPSTGKTAIAMGMA 86
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 689 KFVNLGIHPPKGVLLYGPPGTGKTLL 612
+F+N + + V+ GPPG+GK++L
Sbjct: 2504 EFLNFSLTKNRCVIFCGPPGSGKSML 2529
>SPCC737.07c |||DNA polymerase alpha-associated DNA helicase A
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 660
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKT 618
++K V I + L++GPPGTGKT
Sbjct: 214 QKKAVKFSIAVKELSLIHGPPGTGKT 239
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 662 PKGVLLYGPPGTGKTLL 612
PKG+ LYG G GKT L
Sbjct: 118 PKGIYLYGDVGCGKTAL 134
>SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 441 CTNSVQFINEDDCWCLLFSQCKGVADKLGTITNEHLHKLWTSQLQKCRLCL 593
C+N F + C + + C+ +K N+H+H + + L+ C + L
Sbjct: 420 CSNIPSFDQQPLCLYIQMALCEETLEKHINRRNKHIHGVMSKGLRNCYILL 470
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTK 585
+++ G PGTGKT LA A T+
Sbjct: 11 IIICGTPGTGKTTLAEQVAETTE 33
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 3.7
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Frame = +1
Query: 40 TSSMASIKSS*VTAVAERRSAIIPASTQTALHWA-PLKSSVERDSSSKLTSGLTFILREW 216
TSS S+ +T+ S+ P ++ T ++ + P+ SS ++S+ +TS
Sbjct: 1153 TSSTVVNTSTPITSSTVVNSST-PITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTP 1211
Query: 217 ICI-ILARASSLG*GNSIFRSKRPDLSRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNI 393
I + S+ +S+ S P S + ST + ++ L S+ + S+ N+S
Sbjct: 1212 ITSSTVLNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNSSTP 1271
Query: 394 VRCTSRSPAFSESKRFVPIASSSSMKMIAGAFSLANAKASRTSLAPSPMNICTSCGPASF 573
+ + S A + S +PI SSS ++ + + ++ A TS + + ++ S P +
Sbjct: 1272 I---TSSTALNTS---IPITSSS---VLNSSTPITSSTALNTSTSITSSSVLNSSTPITS 1322
Query: 574 KNV 582
V
Sbjct: 1323 STV 1325
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 373 WFNNSNIVRCTSRSPAFSESKRFVPIASSS 462
W + I +CT+ FS K +P A S
Sbjct: 223 WISKCEISKCTTTEDIFSYLKNLIPSAEKS 252
>SPBC1921.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 117
Score = 25.4 bits (53), Expect = 8.6
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -2
Query: 547 RCSLVMVPSLSATPLHWLKRRHQQSSSLMNWTLLVQSVLIQKRLETVRCSVLCWSC*TSL 368
RC + + P+ A + W K++ + L W + + + +L + LC C +
Sbjct: 36 RCPIWLWPTYDAQTIPWKKKKKSEQHEL--WASVYNRTIGKLQLNKLTFIDLC-DCFLNP 92
Query: 367 MGLAQLLTSRSLQLPIEWT 311
L+ L + S PIE T
Sbjct: 93 TLLSNLFAAFSGYYPIEVT 111
>SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 571
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 361 NPSSWFNNSNIVRCTSRSPAFSESKRFVPIAS 456
+P +WF++ + S SP FS +PI++
Sbjct: 488 SPQNWFSSFSYQTPNSASPPFSSLSHTLPISA 519
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 650 LLYGPPGTGKTL 615
L+ GPPGTGKT+
Sbjct: 411 LIQGPPGTGKTV 422
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQ 546
+L YG PGTGKT A + + L GPQL++
Sbjct: 55 MLFYGSPGTGKTSTILALSRE-------LFGPQLMK 83
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,250,094
Number of Sequences: 5004
Number of extensions: 70755
Number of successful extensions: 349
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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