Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j10r
(740 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 440 e-124
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 434 e-122
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 306 8e-84
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 305 2e-83
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 283 6e-77
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 283 6e-77
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 277 4e-75
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 268 3e-72
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 268 3e-72
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 266 8e-72
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 266 1e-71
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 200 8e-52
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 199 2e-51
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 192 2e-49
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 192 2e-49
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 190 6e-49
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 190 6e-49
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 189 2e-48
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 188 3e-48
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 186 1e-47
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 184 4e-47
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 184 7e-47
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 182 2e-46
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 182 2e-46
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 182 3e-46
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 180 9e-46
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 180 9e-46
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 174 4e-44
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 172 2e-43
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 168 3e-42
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 165 3e-41
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 162 3e-40
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 153 1e-37
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 152 3e-37
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 147 8e-36
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 146 2e-35
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 144 7e-35
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 141 4e-34
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 141 4e-34
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 138 3e-33
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 138 5e-33
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 137 6e-33
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 137 8e-33
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 135 3e-32
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 135 3e-32
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 132 2e-31
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 130 7e-31
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 129 2e-30
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 128 3e-30
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 126 2e-29
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 124 8e-29
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 124 8e-29
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 122 2e-28
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 122 2e-28
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 99 2e-21
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 98 6e-21
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 97 8e-21
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 78 7e-15
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 75 5e-14
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 75 7e-14
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 74 1e-13
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 64 7e-11
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 62 3e-10
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 62 4e-10
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 60 2e-09
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 59 3e-09
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 58 6e-09
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 57 1e-08
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 57 1e-08
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 56 2e-08
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 56 2e-08
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 56 2e-08
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 56 2e-08
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 56 2e-08
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 55 4e-08
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 55 4e-08
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 55 6e-08
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 53 2e-07
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 51 9e-07
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 50 2e-06
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 45 6e-05
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 44 1e-04
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 43 2e-04
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 42 4e-04
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 42 6e-04
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 41 7e-04
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 39 0.004
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 37 0.012
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 37 0.012
At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyri... 36 0.028
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 35 0.065
At4g31860.2 68417.m04527 protein phosphatase 2C, putative / PP2C... 33 0.15
At4g31860.1 68417.m04526 protein phosphatase 2C, putative / PP2C... 33 0.15
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 33 0.15
At2g39730.3 68415.m04879 ribulose bisphosphate carboxylase/oxyge... 32 0.35
At2g39730.2 68415.m04878 ribulose bisphosphate carboxylase/oxyge... 32 0.35
At2g39730.1 68415.m04877 ribulose bisphosphate carboxylase/oxyge... 32 0.35
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 32 0.35
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 32 0.46
At2g36380.1 68415.m04464 ABC transporter family protein related ... 32 0.46
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 32 0.46
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 32 0.46
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 32 0.46
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 31 0.61
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 31 0.61
At1g66950.1 68414.m07612 ABC transporter family protein similar ... 31 0.61
At4g28070.1 68417.m04026 AFG1-like ATPase family protein contain... 31 0.80
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 31 0.80
At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR... 30 1.4
At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial (... 30 1.4
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 30 1.4
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 30 1.4
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 30 1.4
At2g25070.1 68415.m02999 protein phosphatase 2C, putative / PP2C... 30 1.4
At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR... 30 1.9
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 30 1.9
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 30 1.9
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 30 1.9
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 30 1.9
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 30 1.9
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 30 1.9
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 30 1.9
At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS cla... 30 1.9
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 30 1.9
At1g63870.1 68414.m07233 disease resistance protein (TIR-NBS-LRR... 30 1.9
At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR... 29 2.4
At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein ... 29 2.4
At4g30490.1 68417.m04329 AFG1-like ATPase family protein contain... 29 2.4
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 29 2.4
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 29 2.4
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 29 3.2
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 29 3.2
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 29 4.3
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 29 4.3
At4g25750.1 68417.m03707 ABC transporter family protein Bactroce... 29 4.3
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 29 4.3
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 29 4.3
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 28 5.7
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 28 5.7
At2g34680.1 68415.m04260 leucine-rich repeat family protein cont... 28 5.7
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 28 5.7
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 28 7.5
At1g63160.1 68414.m07138 replication factor C 40 kDa, putative s... 28 7.5
At1g33290.2 68414.m04118 sporulation protein-related isoform con... 28 7.5
At1g33290.1 68414.m04117 sporulation protein-related isoform con... 28 7.5
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 28 7.5
At5g52860.1 68418.m06561 ABC transporter family protein 27 9.9
At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR... 27 9.9
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 27 9.9
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 27 9.9
At2g31320.1 68415.m03824 poly [ADP-ribose] polymerase, putative ... 27 9.9
At1g79950.1 68414.m09344 helicase-related similar to BRCA1-bindi... 27 9.9
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 27 9.9
At1g73170.1 68414.m08466 expressed protein 27 9.9
At1g62390.1 68414.m07039 octicosapeptide/Phox/Bem1p (PB1) domain... 27 9.9
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 27 9.9
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 440 bits (1084), Expect = e-124
Identities = 210/246 (85%), Positives = 227/246 (92%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QIQEL+EA+VLPMTHKE+F LG+ PPKGVLLYGPPGTGKTL+ARACAAQT +TFLKLAG
Sbjct: 179 QIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAG 238
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
PQLVQMFIGDGAKLVRDAF LAKEKAP IIFIDE+DAIGTKRFDSE +GDREVQRTMLEL
Sbjct: 239 PQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLEL 298
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
LNQLDGFSS IKVIAATNR DILDPAL+RSGRLDRKIEFPHP EEARARI+QIHSRKM
Sbjct: 299 LNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKM 358
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKKA 21
NV PDVNFEEL+RSTDDFNGAQ KAVCVEAGM+ALRR AT V HEDF + I++VQAKKKA
Sbjct: 359 NVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKA 418
Query: 20 NLSYYA 3
+L+YYA
Sbjct: 419 SLNYYA 424
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 434 bits (1070), Expect = e-122
Identities = 208/246 (84%), Positives = 226/246 (91%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QIQEL+EA+VLPMTHKE+F LGI PPKGVLLYGPPGTGKTL+ARACAAQT +TFLKLAG
Sbjct: 178 QIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAG 237
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
PQLVQMFIGDGAKLVRDAF LAKEK+P IIFIDE+DAIGTKRFDSE +GDREVQRTMLEL
Sbjct: 238 PQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLEL 297
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
LNQLDGFSS IKVIAATNR DILDPAL+RSGRLDRKIEFPHP EEAR RI+QIHSRKM
Sbjct: 298 LNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKM 357
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKKA 21
NV+ DVNFEEL+RSTDDFNGAQ KAVCVEAGM+ALRR AT V HEDF + I++VQAKKKA
Sbjct: 358 NVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKA 417
Query: 20 NLSYYA 3
+L+YYA
Sbjct: 418 SLNYYA 423
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 306 bits (752), Expect = 8e-84
Identities = 142/239 (59%), Positives = 183/239 (76%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QIQE+ EAV LP+TH E + ++GI PPKGV+LYG PGTGKTLLA+A A T +TFL++ G
Sbjct: 196 QIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVG 255
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+L+Q ++GDG KLVR+ F +A + +P+I+FIDE+DA+GTKR+D+ G+RE+QRTMLEL
Sbjct: 256 SELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLEL 315
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
LNQLDGF S D+KVI ATNR++ LDPALLR GR+DRKIEFP P+ + R RI QIH+ KM
Sbjct: 316 LNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKM 375
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKK 24
+S DVN EE + D+F+GA KA+C EAG++ALR VTH DF A +V KKK
Sbjct: 376 TLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMFKKK 434
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 305 bits (748), Expect = 2e-83
Identities = 141/239 (58%), Positives = 183/239 (76%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QIQE+ EAV LP+TH E + ++GI PPKGV+LYG PGTGKTLLA+A A T +TFL++ G
Sbjct: 196 QIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVG 255
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+L+Q ++GDG KLVR+ F +A + +P+I+FIDE+DA+GTKR+D+ G+RE+QRTMLEL
Sbjct: 256 SELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLEL 315
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
LNQLDGF S D+KVI ATNR++ LDPALLR GR+DRKIEFP P+ + R RI QIH+ KM
Sbjct: 316 LNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKM 375
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKK 24
++ DVN EE + D+F+GA KA+C EAG++ALR VTH DF A +V KKK
Sbjct: 376 TLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVMFKKK 434
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 283 bits (695), Expect = 6e-77
Identities = 136/238 (57%), Positives = 181/238 (76%), Gaps = 1/238 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+E+ E + LP+ H E F +LGI PKGVLLYGPPGTGKTLLARA A T TF++++G
Sbjct: 169 QIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLE 384
+LVQ +IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +S GD EVQRTMLE
Sbjct: 229 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLE 288
Query: 383 LLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
LLNQLDGF ++ IKV+ ATNR+DILD ALLR GR+DRKIEFP+PNEE+R I++IHSRK
Sbjct: 289 LLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRK 348
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAK 30
MN+ ++ ++++ + +GA+ KAVC EAGM ALR VT EDF A+ +V K
Sbjct: 349 MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKK 406
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 283 bits (695), Expect = 6e-77
Identities = 136/238 (57%), Positives = 181/238 (76%), Gaps = 1/238 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+E+ E + LP+ H E F +LGI PKGVLLYGPPGTGKTLLARA A T TF++++G
Sbjct: 169 QIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLE 384
+LVQ +IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +S GD EVQRTMLE
Sbjct: 229 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLE 288
Query: 383 LLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
LLNQLDGF ++ IKV+ ATNR+DILD ALLR GR+DRKIEFP+PNEE+R I++IHSRK
Sbjct: 289 LLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRK 348
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAK 30
MN+ ++ ++++ + +GA+ KAVC EAGM ALR VT EDF A+ +V K
Sbjct: 349 MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKK 406
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 277 bits (680), Expect = 4e-75
Identities = 131/234 (55%), Positives = 171/234 (73%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+++ E V LPM H EKFV LGI PPKGVL YGPPGTGKTLLARA A +T + F+++ G
Sbjct: 176 QIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIG 235
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTMLE+
Sbjct: 236 SELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEI 295
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
+NQLDGF + +IKV+ ATNR D LDPALLR GRLDRK+EF P+ E+R +I +IH+R M
Sbjct: 296 VNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTM 355
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEV 39
N D+ FE L+R + GA ++VC EAGM A+R VT +DF+DA+ +V
Sbjct: 356 NCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 268 bits (657), Expect = 3e-72
Identities = 125/246 (50%), Positives = 176/246 (71%), Gaps = 1/246 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+EL E++ LP+ + E F+ +GI PPKGVLLYGPPGTGKTLLARA A+ + FLK+
Sbjct: 147 QIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVS 206
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
++ +IG+ A+L+R+ F A+E P IIF+DE+DAIG +RF + DRE+QRT++EL
Sbjct: 207 SAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 266
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
LNQLDGF + +K+I ATNR D+LDPALLR GRLDRKIE P PNE++R I++IH+ +
Sbjct: 267 LNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGI 326
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEV-QAKKK 24
++++E + + + FNGA + +C EAGM A+R V HEDFM A+ ++ +AKK
Sbjct: 327 AKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKL 386
Query: 23 ANLSYY 6
+ S+Y
Sbjct: 387 ESSSHY 392
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 268 bits (656), Expect = 3e-72
Identities = 125/246 (50%), Positives = 175/246 (71%), Gaps = 1/246 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+EL E++ LP+ + E F+ +GI PPKGVLLYGPPGTGKTLLARA A+ + FLK+
Sbjct: 147 QIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVS 206
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
++ +IG+ A+L+R+ F A+E P IIF+DE+DAIG +RF + DRE+QRT++EL
Sbjct: 207 SAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMEL 266
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
LNQLDGF +K+I ATNR D+LDPALLR GRLDRKIE P PNE++R I++IH+ +
Sbjct: 267 LNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGI 326
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEV-QAKKK 24
++++E + + + FNGA + +C EAGM A+R V HEDFM A+ ++ +AKK
Sbjct: 327 AKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKL 386
Query: 23 ANLSYY 6
+ S+Y
Sbjct: 387 ESSSHY 392
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 266 bits (653), Expect = 8e-72
Identities = 125/245 (51%), Positives = 169/245 (68%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
Q QE+ EAV LP+TH E + +GI PP+GVLLYGPPGTGKT+LA+A A T + F+++ G
Sbjct: 163 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVG 222
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+ VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI T RFD++ DREVQR ++EL
Sbjct: 223 SEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMEL 282
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
LNQ+DGF T ++KVI ATNR D LDPALLR GRLDRKIEFP P+ + + Q+ + KM
Sbjct: 283 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKM 342
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKKA 21
N+S +V+ E+ D + A+ A+C EAGM A+R++ + +DF K
Sbjct: 343 NLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDT 402
Query: 20 NLSYY 6
+ +Y
Sbjct: 403 DFEFY 407
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 266 bits (651), Expect = 1e-71
Identities = 127/234 (54%), Positives = 169/234 (72%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+++ E V LPM H EKFV LGI PPKGVL YGPPG+GKTL+ARA A +T + F+++ G
Sbjct: 213 QIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVG 272
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+LVQ +IG+GA++VR+ F +A+ K I+F DE+DAIG RFD D EVQRTMLE+
Sbjct: 273 SELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEI 332
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
L QLDGF + +IKV+ ATNR DILDPALLR GRLDRK+EF P+ E R +I +IH+R M
Sbjct: 333 LYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTM 392
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEV 39
+ D+ FE L+ + GA ++VC+EAGM A+ +VT +DF+DA+ +V
Sbjct: 393 SCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKV 446
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 200 bits (488), Expect = 8e-52
Identities = 102/241 (42%), Positives = 151/241 (62%), Gaps = 3/241 (1%)
Frame = -1
Query: 725 IEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQ 546
++ VV + + +K+ LG PKG LL GPPGTGKTLLARA A + F A + V+
Sbjct: 274 LQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 333
Query: 545 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 366
+F+G GA VRD F AK KAP I+FIDE+DA+G +R G+ E ++T+ +LL ++D
Sbjct: 334 LFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMD 393
Query: 365 GFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPD 186
GFS + + V+AATNR D+LD ALLR GR DR++ P+ R +I+Q+HSR + D
Sbjct: 394 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKD 453
Query: 185 VNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQA---KKKANL 15
V+F++++R T F GA + + EA ++A RR ++ ++ DA+ + A KK A +
Sbjct: 454 VDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVV 513
Query: 14 S 12
S
Sbjct: 514 S 514
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 199 bits (485), Expect = 2e-51
Identities = 101/241 (41%), Positives = 151/241 (62%), Gaps = 3/241 (1%)
Frame = -1
Query: 725 IEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQ 546
++ VV + + +K+ LG PKG LL GPPGTGKTLLARA A + F A + V+
Sbjct: 262 LQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVE 321
Query: 545 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 366
+F+G GA VRD F AK KAP I+FIDE+DA+G +R G+ E ++T+ +LL ++D
Sbjct: 322 LFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMD 381
Query: 365 GFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPD 186
GFS + + V+AATNR D+LD ALLR GR DR++ P+ R +I+++HSR + D
Sbjct: 382 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKD 441
Query: 185 VNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQA---KKKANL 15
V++E+++R T F GA + + EA ++A RR ++ ++ DA+ + A KK A +
Sbjct: 442 VDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVV 501
Query: 14 S 12
S
Sbjct: 502 S 502
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 192 bits (469), Expect = 2e-49
Identities = 97/234 (41%), Positives = 143/234 (61%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
Q+ +E V + E+F +G PKGVLL GPPGTGKTLLA+A A + F ++G +
Sbjct: 230 QDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE 288
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
V+MF+G GA VRD F AKE AP I+F+DE+DA+G +R G+ E ++T+ +LL
Sbjct: 289 FVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLT 348
Query: 374 QLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNV 195
++DGF + V+AATNR DILD ALLR GR DR++ P+ + R I+++HS
Sbjct: 349 EMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKF 408
Query: 194 SPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQA 33
V+ E ++ T F+GA + EA ++A RR TA++ ++ D+I + A
Sbjct: 409 ESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVA 462
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 192 bits (468), Expect = 2e-49
Identities = 96/234 (41%), Positives = 145/234 (61%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
Q+ +E V + E+F +G PKGVLL GPPGTGKTLLA+A A + F ++G +
Sbjct: 237 QDFMEVVEF-LKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSE 295
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
V+MF+G GA VRD F AKE AP I+F+DE+DA+G +R G+ E ++T+ +LL
Sbjct: 296 FVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLT 355
Query: 374 QLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNV 195
++DGF + V+AATNR DILD ALLR GR DR++ P+ + R I+++H+
Sbjct: 356 EMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKF 415
Query: 194 SPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQA 33
DV+ E ++ T F+GA + EA ++A RR+ T+++ ++ D+I + A
Sbjct: 416 DNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVA 469
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 190 bits (464), Expect = 6e-49
Identities = 94/226 (41%), Positives = 143/226 (63%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+EL+E LP+ H + F ++G+ PPKG+LLYGPPG+GKTL+ARA A +T + F + G
Sbjct: 218 QIRELVE---LPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCING 274
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
P+++ G+ +R AF A++ AP+IIFIDE+D+I KR EK +R + +L
Sbjct: 275 PEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTNGEVERRIVSQL 331
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
L +DG S A + V+ ATNR + +DPAL R GR DR+I+ P+E R +++IH++ M
Sbjct: 332 LTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM 391
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHED 63
++ DV+ E +S+ T + GA A+C EA + +R + ED
Sbjct: 392 KLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 437
Score = 183 bits (445), Expect = 1e-46
Identities = 90/216 (41%), Positives = 133/216 (61%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+EL E V P+ H EKF G+ P KGVL YGPPG GKTLLA+A A + ++ F+ + GP+
Sbjct: 490 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 549
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
L+ M+ G+ VR+ F A++ AP ++F DELD+I T+R +S R + +LL
Sbjct: 550 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLT 609
Query: 374 QLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNV 195
++DG ++ + +I ATNR DI+D ALLR GRLD+ I P P+E++R I + RK V
Sbjct: 610 EMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPV 669
Query: 194 SPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRS 87
+ DV+ L++ T F+GA +C A A+R +
Sbjct: 670 AKDVDVTALAKYTQGFSGADITEICQRACKYAIREN 705
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 190 bits (464), Expect = 6e-49
Identities = 94/226 (41%), Positives = 143/226 (63%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+EL+E LP+ H + F ++G+ PPKG+LLYGPPG+GKTL+ARA A +T + F + G
Sbjct: 218 QIRELVE---LPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCING 274
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
P+++ G+ +R AF A++ AP+IIFIDE+D+I KR EK +R + +L
Sbjct: 275 PEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTNGEVERRIVSQL 331
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
L +DG S A + V+ ATNR + +DPAL R GR DR+I+ P+E R +++IH++ M
Sbjct: 332 LTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM 391
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHED 63
++ DV+ E +S+ T + GA A+C EA + +R + ED
Sbjct: 392 KLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 437
Score = 180 bits (437), Expect = 1e-45
Identities = 90/217 (41%), Positives = 133/217 (61%), Gaps = 1/217 (0%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+EL E V P+ H EKF G+ P KGVL YGPPG GKTLLA+A A + ++ F+ + GP+
Sbjct: 490 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPE 549
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQRTMLELL 378
L+ M+ G+ VR+ F A++ AP ++F DELD+I T+R S G R + +LL
Sbjct: 550 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLL 609
Query: 377 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 198
++DG ++ + +I ATNR DI+D ALLR GRLD+ I P P+E++R I + RK
Sbjct: 610 TEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSP 669
Query: 197 VSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRS 87
++ DV+ L++ T F+GA +C A A+R +
Sbjct: 670 IAKDVDIGALAKYTQGFSGADITEICQRACKYAIREN 706
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 189 bits (460), Expect = 2e-48
Identities = 99/236 (41%), Positives = 153/236 (64%), Gaps = 6/236 (2%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
I+ ++ +V + + E+F N GI+ PKGVLL+GPPGTGKTLLA+A A + F G
Sbjct: 324 IKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGT 383
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSE-KAGDREVQRTMLEL 381
V+MF+G A V+D FA ++ AP+IIFIDE+DAIG+KR + G E ++ +L++
Sbjct: 384 DFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQI 443
Query: 380 LNQLDGFS-STADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR- 207
L ++DGF +T+ + VI ATNR+DILDPALLR GR D+ I P+++ R I+++H+R
Sbjct: 444 LTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHARN 503
Query: 206 KMNVSPDVN---FEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
K S D +E++ +T+DF GA+ + V EAG++ R+ + E+ ++A+
Sbjct: 504 KFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGILTARKDLDYIGREELLEAL 559
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 188 bits (458), Expect = 3e-48
Identities = 93/226 (41%), Positives = 143/226 (63%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
QI+EL+E LP+ H + F ++G+ PPKG+LLYGPPG+GKTL+ARA A +T + F + G
Sbjct: 219 QIRELVE---LPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCING 275
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
P+++ G+ +R AF A++ AP+IIFIDE+D+I KR EK +R + +L
Sbjct: 276 PEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR---EKTHGEVERRIVSQL 332
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
L +DG S A + V+ ATNR + +DPAL R GR DR+I+ P+E R +++IH++ M
Sbjct: 333 LTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM 392
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHED 63
++ DV+ E +S+ T + GA A+C EA + +R + +D
Sbjct: 393 KLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDD 438
Score = 186 bits (454), Expect = 1e-47
Identities = 91/216 (42%), Positives = 135/216 (62%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+EL E V P+ H EKF G+ P KGVL YGPPG GKTLLA+A A + ++ F+ + GP+
Sbjct: 491 RELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 550
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
L+ M+ G+ VR+ F A++ AP ++F DELD+I T+R +S R + +LL
Sbjct: 551 LLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLT 610
Query: 374 QLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNV 195
++DG ++ + +I ATNR DI+DPALLR GRLD+ I P P+EE+R +I + RK V
Sbjct: 611 EMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPV 670
Query: 194 SPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRS 87
+ DV+ L++ T F+GA +C + A+R +
Sbjct: 671 AKDVDLRALAKYTQGFSGADITEICQRSCKYAIREN 706
>At3g47060.1 68416.m05110 FtsH protease, putative contains similarity
to FtsH protease GI:13183728 from [Medicago sativa]
Length = 802
Score = 186 bits (454), Expect = 1e-47
Identities = 94/234 (40%), Positives = 147/234 (62%), Gaps = 3/234 (1%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
+ +E +E +V + + EK+V LG PP+GVLL G PGTGKTLLA+A A + + F+ +
Sbjct: 332 EAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSA 391
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDR-EVQRTMLE 384
+ V++++G GA VRD FA AK++AP+IIFIDE+DA+ R + G E ++T+ +
Sbjct: 392 SEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQ 451
Query: 383 LLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH--S 210
LL ++DGF S + + V+ ATNR D+LDPAL R GR DR + P++ R I+++H
Sbjct: 452 LLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSK 511
Query: 209 RKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
+++ + DVN ++ T F GA + EA ++A R++ T V DF+ A+
Sbjct: 512 KELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKIDFIQAV 565
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 184 bits (449), Expect = 4e-47
Identities = 96/234 (41%), Positives = 140/234 (59%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+E++E + P EKF LG PKGVLL GPPGTGKTLLA+A A + F L+G +
Sbjct: 236 EEIVEFLKTP----EKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSE 291
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
++MF+G GA RD F AK +P I+FIDE+DA+G R G+ E ++T+ ++L
Sbjct: 292 FIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILT 351
Query: 374 QLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNV 195
++DGF+ + VIAATNR +ILD ALLR GR DR++ P+ R I+++HSR +
Sbjct: 352 EMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKL 411
Query: 194 SPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQA 33
DV+ ++ T F+GA + EA ++A RR +T + D+I + A
Sbjct: 412 DKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRGKDKITLTEIDDSIDRIVA 465
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 184 bits (447), Expect = 7e-47
Identities = 93/215 (43%), Positives = 129/215 (60%)
Frame = -1
Query: 731 ELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQL 552
+L+EAV P H++ F +G PP G+L++GPPG KTL+ARA A++ K FL + GP+L
Sbjct: 735 QLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPEL 794
Query: 551 VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 372
++G+ K VR FA A+ AP+IIF DE+D++ + R E G R M +LL +
Sbjct: 795 FSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIR-GKENDGVSVSDRVMSQLLVE 853
Query: 371 LDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVS 192
LDG + VIAATNR D +D ALLR GR DR + PNE R I++IH RK+ S
Sbjct: 854 LDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCS 913
Query: 191 PDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRS 87
D+ +EL+ T + GA +C EA + AL S
Sbjct: 914 SDICLKELASITKGYTGADISLICREAAIAALEES 948
Score = 165 bits (402), Expect = 2e-41
Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 1/203 (0%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K +LG+ P KGVL++GPPGTGKT LAR A + F + GP+++ ++G+ K +
Sbjct: 407 KNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKAL 466
Query: 515 RDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKV 336
+ F A PA++FID+LDAI R ++ G+ QR + LLN +DG S T + V
Sbjct: 467 DEVFRSASNATPAVVFIDDLDAIAPAR---KEGGEELSQRMVATLLNLMDGISRTDGVVV 523
Query: 335 IAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVS-PDVNFEELSRS 159
IAATNR D ++PAL R GRLDR+IE P+ R+ I+ I R M S ++ E+L+ +
Sbjct: 524 IAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMA 583
Query: 158 TDDFNGAQCKAVCVEAGMIALRR 90
T F GA A+C EA + LRR
Sbjct: 584 THGFVGADLSALCCEAAFVCLRR 606
>At5g58870.1 68418.m07376 FtsH protease, putative contains similarity
to cell division protein FtsH homolog 3 SP:P73437 (EC
3.4.24.-) [strain PCC6803] {Synechocystis sp.}
Length = 806
Score = 182 bits (443), Expect = 2e-46
Identities = 91/234 (38%), Positives = 146/234 (62%), Gaps = 3/234 (1%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
+ +E +E +V + + +++V LG PP+GVLL G PGTGKTLLA+A A ++ F+ +
Sbjct: 336 EAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSA 395
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS-EKAGDREVQRTMLE 384
+ V++++G GA VRD FA AK++AP+IIFIDE+DA+ R + E ++T+ +
Sbjct: 396 SEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQ 455
Query: 383 LLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH--S 210
LL ++DGF S++ + V+ ATNR D+LDPAL R GR DR + P++ R I+++H
Sbjct: 456 LLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSK 515
Query: 209 RKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
+++ + DVN ++ T F GA + EA ++A R+S V DF+ A+
Sbjct: 516 KELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAV 569
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 182 bits (443), Expect = 2e-46
Identities = 100/231 (43%), Positives = 140/231 (60%), Gaps = 2/231 (0%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
QE++E V + + +K+ +LG PKG LL GPPGTGKTLLA+A A ++ FL ++G
Sbjct: 332 QEIMEFVHF-LKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSD 390
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
++MF+G G VR F A++ AP+IIFIDE+DAIG R G+ E + T+ +LL
Sbjct: 391 FMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLV 450
Query: 374 QLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNV 195
++DGF +TA + V+A TNR DILD ALLR GR DR+I P+ + R +I +I+ +K+ +
Sbjct: 451 EMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKL 510
Query: 194 --SPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
P + L+ T F GA VC EA +IA R VT F AI
Sbjct: 511 DHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAI 561
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 182 bits (442), Expect = 3e-46
Identities = 91/231 (39%), Positives = 140/231 (60%), Gaps = 3/231 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
++L +AV P+ H FV +GI P +G+LL+GPPG KT LA+A A +++F L+ +
Sbjct: 296 KKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAE 355
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV-QRTMLELL 378
L M++G+G L+R+ F A+ +P+IIF DE D + KR D + V +R + LL
Sbjct: 356 LFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLL 415
Query: 377 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 198
++DG I V+AATNR +D AL+R GR D + P P+ EAR I+Q+H+R M
Sbjct: 416 TEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMT 475
Query: 197 VSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRR--SATAVTHEDFMDA 51
+ DV+ +++ TD F GA+ + +C E+G ++LR +ATAV + F A
Sbjct: 476 LGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAATAVFNRHFQTA 526
Score = 159 bits (385), Expect = 2e-39
Identities = 84/232 (36%), Positives = 141/232 (60%), Gaps = 6/232 (2%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
+Q L E ++ P + + LG+ P+G+LLYGPPGTGKT L RA + + + L+
Sbjct: 31 LQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPH 90
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKA----PAIIFIDELDAIGTKRFDSEKAGDREVQRTM 390
+ + G+ K++R+AFA A A P++IFIDE+D + +R D+ + D + +
Sbjct: 91 SVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARREQDVRIASQL 149
Query: 389 LELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHS 210
L++ SS + V+A+TNRVD +DPAL R+GR D +E PNEE R +I+Q+++
Sbjct: 150 FTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYT 209
Query: 209 RKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATA--VTHEDF 60
+K+N+ P V+ + ++ S + + GA +A+C EA + A +RS+ + +T +DF
Sbjct: 210 KKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDF 261
>At3g16290.1 68416.m02056 FtsH protease, putative contains similarity
to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 180 bits (438), Expect = 9e-46
Identities = 90/225 (40%), Positives = 136/225 (60%)
Frame = -1
Query: 725 IEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQ 546
+E +V TH E + G+ P G+LL GPPG GKTLLA+A A + F ++ Q V+
Sbjct: 422 LEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVE 481
Query: 545 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 366
+++G GA VR + A+E AP+++FIDELDA+G +R + +G +E T+ +LL LD
Sbjct: 482 IYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVSLD 541
Query: 365 GFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPD 186
GF ++ IA+TNR DILDPAL+R GR DRKI P P R I+Q+H+RK ++ D
Sbjct: 542 GFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILQVHARKKPMAED 601
Query: 185 VNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDA 51
+++ ++ TD GA+ + A + +R T +T +D + A
Sbjct: 602 LDYMAVASMTDGMVGAELANIVEIAAINMMRDGRTELTTDDLLQA 646
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 180 bits (438), Expect = 9e-46
Identities = 101/232 (43%), Positives = 141/232 (60%), Gaps = 3/232 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
QE++E V + + +K+ +LG PKG LL GPPGTGKTLLA+A A ++ FL ++G
Sbjct: 337 QEIMEFVHF-LQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSD 395
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQRTMLELL 378
++MF+G G VR+ F A++ AP+IIFIDE+DAIG R G+ E + T+ +LL
Sbjct: 396 FMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLL 455
Query: 377 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 198
++DGF +TA + V+A TNR DILD ALLR GR DR+I P+ + R +I QI+ +K+
Sbjct: 456 VEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIK 515
Query: 197 V--SPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
+ P + L+ T F GA VC EA +IA R VT F AI
Sbjct: 516 LDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAI 567
>At3g02450.1 68416.m00232 cell division protein ftsH, putative similar
to SWISS-PROT:P46469 cell division protein ftsH homolog
[Lactococcus lactis]; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 622
Score = 174 bits (424), Expect = 4e-44
Identities = 96/230 (41%), Positives = 138/230 (60%), Gaps = 2/230 (0%)
Frame = -1
Query: 731 ELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQL 552
EL+E +V + + LG P+GVLL GPPGTGKTLLARA A + F ++ +
Sbjct: 345 ELVE-IVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF 403
Query: 551 VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 372
V++F+G GA +RD F A++ +P+IIFIDELDA+G KR ++ + E +T+ +LL +
Sbjct: 404 VELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKR---GRSFNDERDQTLNQLLTE 460
Query: 371 LDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVS 192
+DGF S + VIAATNR + LD AL R GR RK+ P++E R +I+ IH R + +
Sbjct: 461 MDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLE 520
Query: 191 PDVNF--EELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
D + ++ T F GA + EA ++A RR AV ED M+AI
Sbjct: 521 EDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVAREDIMEAI 570
>At4g23940.1 68417.m03443 FtsH protease, putative contains similarity
to zinc dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 946
Score = 172 bits (418), Expect = 2e-43
Identities = 91/239 (38%), Positives = 144/239 (60%), Gaps = 8/239 (3%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
++QEL++ + P + F +GI PP GVLL GPPG GKTL+A+A A + F ++AG
Sbjct: 441 ELQELVKYLKNP----DLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAG 496
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR---FDSE-----KAGDRE 405
+ V++ +G G+ +RD F AK P++IFIDE+DA+ T+R F A +E
Sbjct: 497 SEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQE 556
Query: 404 VQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARI 225
+ T+ +LL +LDGF + + + ATNR D+LDPALLR GR DRKI PN + R I
Sbjct: 557 RETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNAKGRLDI 616
Query: 224 MQIHSRKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
++IH+ K+ +S V+ + + ++GA+ + EA ++A+R++ ++ D DA+
Sbjct: 617 LKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSDMDDAV 675
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 168 bits (409), Expect = 3e-42
Identities = 92/199 (46%), Positives = 124/199 (62%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
QEL E VV + + KF LG PKG+LL G PGTGKTLLA+A A + F AG +
Sbjct: 372 QEL-EEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSE 430
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
+MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R K + ++T+ +LL
Sbjct: 431 FEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQWEGHTKKTLHQLLV 486
Query: 374 QLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNV 195
++DGF I V+AATN DILDPAL R GR DR I P P+ R I++++ + +
Sbjct: 487 EMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPM 546
Query: 194 SPDVNFEELSRSTDDFNGA 138
S DV+ + ++R T FNGA
Sbjct: 547 SEDVDVKAIARGTPGFNGA 565
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 165 bits (401), Expect = 3e-41
Identities = 95/241 (39%), Positives = 140/241 (58%), Gaps = 3/241 (1%)
Frame = -1
Query: 725 IEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQ 546
+E +V + ++F LG PKGVLL GPPGTGKT+LARA A + F +G + +
Sbjct: 239 LEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEE 298
Query: 545 MFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLD 366
MF+G GA+ VRD F+ AK+ +P IIFIDE+DAIG R ++ + ++ T+ ++L +LD
Sbjct: 299 MFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQ---QYMKMTLNQMLVELD 355
Query: 365 GFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPD 186
GF I V+AATN + LD AL+R GR DR I P+P+ E R +I++ H K+ + D
Sbjct: 356 GFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAED 415
Query: 185 VNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDF---MDAILEVQAKKKANL 15
V+ ++R T F+GA + A + A + VT D D I+ +K A +
Sbjct: 416 VDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIMMGSERKSAVI 475
Query: 14 S 12
S
Sbjct: 476 S 476
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 162 bits (393), Expect = 3e-40
Identities = 88/220 (40%), Positives = 135/220 (61%), Gaps = 4/220 (1%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 549
+++ V LP+ HK+ F + G+ GVLLYGPPGTGKTLLA+A A + FL + GP+L+
Sbjct: 670 ILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELI 728
Query: 548 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 369
M+IG+ K VRD F A+ P +IF DELD++ R S +G + R + ++L ++
Sbjct: 729 NMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGG-VMDRVVSQMLAEI 787
Query: 368 DGFS-STADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA--RARIMQIHSRKMN 198
DG S S+ D+ +I A+NR D++DPALLR GR D K+ + N +A R R+++ +RK
Sbjct: 788 DGLSDSSQDLFIIGASNRPDLIDPALLRPGRFD-KLLYVGVNADASYRERVLKALTRKFK 846
Query: 197 VSPDVNFEELSRS-TDDFNGAQCKAVCVEAGMIALRRSAT 81
+S DV+ +++ F GA A+C +A A +R +
Sbjct: 847 LSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVS 886
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/82 (21%), Positives = 33/82 (40%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAI 474
VLL+G PG GK + + A + ++ + L+ + + F +A+ +P I
Sbjct: 380 VLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTI 439
Query: 473 IFIDELDAIGTKRFDSEKAGDR 408
+ + D GDR
Sbjct: 440 LLLRHFDVFKNLGSQDGSLGDR 461
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439: Bromodomain
Length = 1210
Score = 153 bits (371), Expect = 1e-37
Identities = 92/236 (38%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARA--CAAQT---KSTFL 573
I +L E V P+ + E F + I PP+GVLL GPPGTGKTL+ARA CAA K +F
Sbjct: 390 INDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFY 449
Query: 572 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRT 393
G ++ ++G+ + ++ F A+ P+IIF DE+D + R ++ + T
Sbjct: 450 MRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVST 509
Query: 392 MLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 213
+L L+ DG S + +I ATNRVD +D AL R GR DR+ F P EARA I+ IH
Sbjct: 510 LLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFSLPGCEARAEILDIH 566
Query: 212 SRKMNVSPDVNF-EELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
+RK P EEL+ + + GA KA+C EA + A R V D AI
Sbjct: 567 TRKWKHPPTRELKEELAATCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKYAI 622
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 152 bits (368), Expect = 3e-37
Identities = 90/246 (36%), Positives = 133/246 (54%), Gaps = 6/246 (2%)
Frame = -1
Query: 722 EAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARA-----CAAQTKSTFLKLAGP 558
E V++P+ + E F NLG+ PP+G+LL+G PGTGKTL+ RA + + G
Sbjct: 733 EVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARKGA 792
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 378
+ ++GD + +R F +A++ P+IIF DE+D + KR + V T+L LL
Sbjct: 793 DCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPKRSRQQDQTHSSVVSTLLALL 852
Query: 377 NQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM- 201
DG S + VI ATN D +DPAL R GR DR+I FP P+ + RA I+ +H+RK
Sbjct: 853 ---DGLKSRGSVVVIGATNYPDAIDPALRRPGRFDREIYFPLPSVDDRAAIISLHTRKWP 909
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKKA 21
+ +++ T F GA +A+C +A MIAL RS E A L V + +A
Sbjct: 910 KPVSGYLLKWIAKETAGFAGADIQALCTQAAMIALNRSFP--LQESLAAAELGVSSSNRA 967
Query: 20 NLSYYA 3
L ++
Sbjct: 968 ALPSFS 973
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 147 bits (356), Expect = 8e-36
Identities = 82/226 (36%), Positives = 131/226 (57%), Gaps = 10/226 (4%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
+ EL V+ P+ + E F +G+ PP G+L +GPPG GKT LA A A + F K++
Sbjct: 242 LDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISAT 301
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELL 378
+++ G + +R+ F+ A AP+I+FIDE+DAIG+KR + ++ ++ R + +LL
Sbjct: 302 EVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK---RIVTQLL 358
Query: 377 NQLDG----------FSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 228
+DG SS + VI ATNR D LDPAL RSGR + +I P+E+ARA
Sbjct: 359 TCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAE 418
Query: 227 IMQIHSRKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRR 90
I+ + ++K+ + + + ++R T F GA ++V AG A++R
Sbjct: 419 ILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKR 464
Score = 134 bits (325), Expect = 4e-32
Identities = 76/233 (32%), Positives = 128/233 (54%), Gaps = 2/233 (0%)
Frame = -1
Query: 716 VVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFI 537
+V P+ + + G+ G LLYGPPG GKTL+A+A A + + F+ + G +L+ ++
Sbjct: 544 IVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYV 603
Query: 536 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 357
G+ +R F A+ AP +IF DE+DA+ T R K G V+R + + L +LDG
Sbjct: 604 GESELAIRTLFQRARTCAPCVIFFDEVDALTTSR---GKEGAWVVERLLNQFLVELDG-G 659
Query: 356 STADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNF 177
++ VI ATNR D++DPA LR GR + P PN + RA I++ +RK + P V+
Sbjct: 660 ERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDL 719
Query: 176 EELSRST-DDFNGAQCKAVCVEAGMIALRRS-ATAVTHEDFMDAILEVQAKKK 24
+ ++++ + F+GA + +A A+ ++ + ED + I + K +
Sbjct: 720 DGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSEDDVTDITQCTIKTR 772
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 146 bits (353), Expect = 2e-35
Identities = 91/231 (39%), Positives = 136/231 (58%), Gaps = 9/231 (3%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 549
L EAVVLP+ E F + P KGVL++GPPGTGKTLLA+A A + +TF ++ L
Sbjct: 251 LEEAVVLPLWMPEYFQGIR-RPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLA 309
Query: 548 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE-VQRTMLELLNQ 372
+ G+ ++VR F LA+ AP+ IFIDE+D++ R S G+ E +R ELL Q
Sbjct: 310 SKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGS---GEHESSRRVKSELLVQ 366
Query: 371 LDGFSSTAD--------IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQI 216
+DG S+TA + V+AATN +D AL R RL+++I P P+ E+R ++ I
Sbjct: 367 VDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRR--RLEKRIYIPLPDFESRKALINI 424
Query: 215 HSRKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHED 63
+ R + V+ DVN E+++R T+ ++G VC +A M +RR T ++
Sbjct: 425 NLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDE 475
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 144 bits (348), Expect = 7e-35
Identities = 83/215 (38%), Positives = 121/215 (56%), Gaps = 1/215 (0%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
I+E+IE LP + F + VLLYGPPG GKT + A AA F+ + GP
Sbjct: 856 IKEMIE---LPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGP 912
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQRTMLEL 381
+L+ +IG + VRD F+ A AP I+F DE D+I KR D+ DR V +
Sbjct: 913 ELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVN----QF 968
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
L +LDG + V AAT+R D+LDPALLR GRLDR + P+ R I+ + SRK+
Sbjct: 969 LTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKL 1028
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIAL 96
++ D++ E ++ T+ F+GA +A+ +A + A+
Sbjct: 1029 LMADDIDLEPIALMTEGFSGADLQALLSDAQLAAV 1063
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Frame = -1
Query: 686 FVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMF------IGDGA 525
F I P +L+YGPPG+GKT+LARA A + LA LV +
Sbjct: 585 FSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIH 644
Query: 524 KLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSE----KAGDREVQRTMLELLNQLDGFS 357
++ A E AP++I +D+LD+I + D+E G + + + ++++ +
Sbjct: 645 HVLSSVIAEGLEHAPSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYR 704
Query: 356 STA----DIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIM--QIHSRKMNV 195
+++ + +A+ ++ + L SGR D ++ P R I+ +I R ++
Sbjct: 705 NSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDC 764
Query: 194 SPDV 183
S D+
Sbjct: 765 SEDI 768
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 141 bits (342), Expect = 4e-34
Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 1/235 (0%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 549
L EAVV+P+ + F L + P KG+LL+GPPGTGKT+LA+A A + +TF ++ +V
Sbjct: 124 LKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVV 182
Query: 548 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 369
+ GD KL+R F LA+ AP+ IF+DE+DAI ++R ++ +R ELL Q+
Sbjct: 183 SKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQM 242
Query: 368 DGFSSTAD-IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVS 192
DG T + + V+AATN LD A+LR RL+++I P P+ EAR + ++
Sbjct: 243 DGLQKTNELVFVLAATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEMLIPSQPGD 300
Query: 191 PDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKK 27
+ + L ++ ++G+ + +C EA M LRR T ED D + E + K
Sbjct: 301 EPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRR--TLAILEDREDVVPEDELPK 353
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 141 bits (342), Expect = 4e-34
Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 1/235 (0%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV 549
L EAVV+P+ + F L + P KG+LL+GPPGTGKT+LA+A A + +TF ++ +V
Sbjct: 115 LKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVV 173
Query: 548 QMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQL 369
+ GD KL+R F LA+ AP+ IF+DE+DAI ++R ++ +R ELL Q+
Sbjct: 174 SKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQM 233
Query: 368 DGFSSTAD-IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVS 192
DG T + + V+AATN LD A+LR RL+++I P P+ EAR + ++
Sbjct: 234 DGLQKTNELVFVLAATNLPWELDAAMLR--RLEKRILVPLPDPEARRGMFEMLIPSQPGD 291
Query: 191 PDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKK 27
+ + L ++ ++G+ + +C EA M LRR T ED D + E + K
Sbjct: 292 EPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRR--TLAILEDREDVVPEDELPK 344
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 138 bits (335), Expect = 3e-33
Identities = 81/218 (37%), Positives = 127/218 (58%), Gaps = 4/218 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFV-NLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
Q L E V+LP+ E F + P KGVLLYGPPGTGKT+LA+A A ++++ F+ +
Sbjct: 97 QALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIARESEAVFINVKVS 156
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM-LEL 381
L+ + GD KLV F+LA + PAIIFIDE+D+ +R ++ D E M E
Sbjct: 157 NLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQR----RSTDNEAMSNMKTEF 212
Query: 380 LNQLDGFSS--TADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 207
+ DGF++ A + V+AATNR LD A+LR R + E P+ + RA+I+++ +
Sbjct: 213 MALWDGFTTDQNARVMVLAATNRPSELDEAILR--RFPQSFEIGMPDCQERAQILKVVLK 270
Query: 206 KMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 93
+V D+N++ ++R +D+ G+ +C +A +R
Sbjct: 271 GESVESDINYDRIARLCEDYTGSDIFELCKKAAYFPIR 308
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 138 bits (333), Expect = 5e-33
Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 5/211 (2%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFV--NLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
L E V+LPM E F NL + P KG+LL+GPPGTGKTLLA+A A + + F+ + G
Sbjct: 363 LNELVILPMRRPELFARGNL-LRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGST 421
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA-IGTKRFDSEKAGDREVQRTMLELL 378
L + GD KL + F+ A + AP IIF+DE+D+ +G + SE R ++ E +
Sbjct: 422 LTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGARGGSSEHEATRRMRN---EFM 478
Query: 377 NQLDGFSS--TADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
DG S + I ++ ATNR LD A++R RL R+I P+ E R +I++I
Sbjct: 479 AAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKILKIFLTP 536
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEA 111
N+ D FE+L++ T+ ++G+ K +C+ A
Sbjct: 537 ENLESDFQFEKLAKETEGYSGSDLKNLCIAA 567
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 137 bits (332), Expect = 6e-33
Identities = 82/218 (37%), Positives = 124/218 (56%), Gaps = 4/218 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFV-NLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
Q L E V+LP+ E F + P KGVLLYGPPGTGKT+LA+A A ++ + F+ +
Sbjct: 94 QALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVS 153
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM-LEL 381
L+ + GD KLV F+LA + PAIIFIDE+++ +R ++ D E M E
Sbjct: 154 NLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQR----RSTDHEAMANMKTEF 209
Query: 380 LNQLDGFSST--ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 207
+ DGFS+ A + V+AATNR LD A+LR RL + E P+ RA I+++ +
Sbjct: 210 MALWDGFSTDPHARVMVLAATNRPSELDEAILR--RLPQAFEIGIPDRRERAEILKVTLK 267
Query: 206 KMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 93
V PD++F+ ++R + + G+ +C +A +R
Sbjct: 268 GERVEPDIDFDHIARLCEGYTGSDIFELCKKAAYFPIR 305
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 137 bits (331), Expect = 8e-33
Identities = 82/245 (33%), Positives = 138/245 (56%), Gaps = 3/245 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
Q L+E V+LP ++ F L P +G+LL+GPPG GKT+LA+A A+++++TF ++
Sbjct: 226 QALLEMVILPAKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASS 284
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN 375
L ++G+ KLV+ F +A + P++IF+DE+D+I + R SE R R E L
Sbjct: 285 LTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENEASR---RLKSEFLI 341
Query: 374 QLDGFSSTAD--IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR-K 204
Q DG +S D + +I ATN+ LD A+LR RL ++I P P+ R + + + +
Sbjct: 342 QFDGVTSNPDDLVIIIGATNKPQELDDAVLR--RLVKRIYVPLPDSNVRKLLFKTKLKCQ 399
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKK 24
+ D + +++ + T+ ++G+ +A+C EA M+ +R IL +QA K
Sbjct: 400 PHSLSDGDIDKIVKETEGYSGSDLQALCEEAAMMPIRELGA---------NILTIQANKV 450
Query: 23 ANLSY 9
+L Y
Sbjct: 451 RSLRY 455
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 135 bits (327), Expect = 3e-32
Identities = 77/218 (35%), Positives = 126/218 (57%), Gaps = 4/218 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGI-HPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
+ L E V+LP+ E F + P KG+LL+GPPGTGKT+LA+A A + + F+ ++
Sbjct: 973 ETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMS 1032
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-EL 381
+ + G+G K V+ F+LA + AP++IF+DE+D++ +R E G+ E R M E
Sbjct: 1033 SITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRR---ENPGEHEAMRKMKNEF 1089
Query: 380 LNQLDGF--SSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR 207
+ DG + V+AATNR LD A++R RL R++ P+ R++I+ +
Sbjct: 1090 MVNWDGLRTKDRERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDATNRSKILSVILA 1147
Query: 206 KMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 93
K ++PDV+ E ++ TD ++G+ K +CV A +R
Sbjct: 1148 KEEIAPDVDLEAIANMTDGYSGSDLKNLCVTAAHFPIR 1185
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 135 bits (326), Expect = 3e-32
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 26/240 (10%)
Frame = -1
Query: 677 LGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA-GPQLVQMFIGDGAKLVRDAFA 501
LGI KG+LL+GPPGTGKTL+AR K+ GP+++ F+G+ K VRD FA
Sbjct: 245 LGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLFA 304
Query: 500 LAKEKAPA--------IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTAD 345
A++ +I DE+DAI R S + G + +LL ++DG + +
Sbjct: 305 DAEQDQRTLGDASELHVIIFDEIDAICKSR-GSTRDGTGVHDSIVNQLLTKIDGVEALNN 363
Query: 344 IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN----VSPDVNF 177
+ +I TNR D+LD ALLR GRL+ ++E P+E R +I+QIH+ KM + D+N
Sbjct: 364 VLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINL 423
Query: 176 EELSRSTDDFNGAQCKAVCVEAGMIALRRSAT-------------AVTHEDFMDAILEVQ 36
+EL+ T +++GA+ + V A AL R + +T EDF+ AI EVQ
Sbjct: 424 QELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTKPVEEENIKITMEDFLHAIYEVQ 483
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1
Query: 650 LLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ-LVQMFIGDGAKLVRDAFALAKEKAPAI 474
LL GP G+GKT LA + ++K+ + ++ + + F A + +I
Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593
Query: 473 IFIDELDAI 447
I +D+++ +
Sbjct: 594 IILDDIERL 602
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 132 bits (319), Expect = 2e-31
Identities = 76/216 (35%), Positives = 125/216 (57%), Gaps = 4/216 (1%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGI-HPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQL 552
L E V+LP+ E F + P KG+LL+GPPGTGKT+LA+A A + + F+ ++ +
Sbjct: 962 LKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1021
Query: 551 VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-ELLN 375
+ G+G K V+ F+LA + AP++IF+DE+D++ +R E G+ E R M E +
Sbjct: 1022 TSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRR---ENPGEHEAMRKMKNEFMI 1078
Query: 374 QLDGF--SSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
DG + V+AATNR LD A++R RL R++ P+ R++I+ + K
Sbjct: 1079 NWDGLRTKDKERVLVLAATNRPFDLDEAVIR--RLPRRLMVNLPDSANRSKILSVILAKE 1136
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 93
++ DV+ E ++ TD ++G+ K +CV A + +R
Sbjct: 1137 EMAEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIR 1172
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 130 bits (315), Expect = 7e-31
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 5/211 (2%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFV--NLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
L E V+LPM E F NL + P KG+LL+GPPGTGKTLLA+A A + + F+ + G
Sbjct: 162 LNELVILPMRRPELFTRGNL-LRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGST 220
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA-IGTKRFDSEKAGDREVQRTMLELL 378
L + GD KL + F+ A + AP IIF+DE+D+ +G + E R ++ E +
Sbjct: 221 LTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRN---EFM 277
Query: 377 NQLDGFSS--TADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
DG S + I ++ ATNR LD A++R RL R+I P+ E R +I++I
Sbjct: 278 AAWDGLRSKDSQRILILGATNRPFDLDDAVIR--RLPRRIYVDLPDAENRLKILKIFLTP 335
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEA 111
N+ F++L++ T+ ++G+ K +C+ A
Sbjct: 336 ENLETGFEFDKLAKETEGYSGSDLKNLCIAA 366
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 129 bits (311), Expect = 2e-30
Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 4/211 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
Q L EAV+LP+ + F P + LLYGPPGTGK+ LA+A A + STF ++
Sbjct: 142 QALQEAVILPVKFPQFFTGKR-RPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSD 200
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAI-GTKRFDSEKAGDREVQRTMLELL 378
LV ++G+ KLV + F +A+E AP+IIF+DE+D++ GT+ +E R ++ ELL
Sbjct: 201 LVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTRGEGNESEASRRIK---TELL 257
Query: 377 NQLDGFSSTAD-IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH--SR 207
Q+ G + + V+AATN LD A+ R R D++I P P +AR + ++H
Sbjct: 258 VQMQGVGHNDEKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPEAKARQHMFKVHLGDT 315
Query: 206 KMNVSPDVNFEELSRSTDDFNGAQCKAVCVE 114
N++ + +FE L + T+ F+G+ +VCV+
Sbjct: 316 PHNLT-EPDFEYLGQKTEGFSGSDV-SVCVK 344
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 128 bits (310), Expect = 3e-30
Identities = 72/210 (34%), Positives = 125/210 (59%), Gaps = 4/210 (1%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGIHPP-KGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQL 552
L E V+LP+ E F + P KG+LL+GPPGTGKT+LA+A A + + F+ ++ +
Sbjct: 832 LKELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKEADANFINISMSSI 891
Query: 551 VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA-IGTKRFDSEKAGDREVQRTMLELLN 375
+ G+G K V+ F+LA + +P++IF+DE+D+ +G + E R+++ E +
Sbjct: 892 TSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDSMLGRREHPREHEASRKIKN---EFMM 948
Query: 374 QLDGFSS--TADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKM 201
DG ++ + V+AATNR LD A++R RL R++ P+ RA I+++ K
Sbjct: 949 HWDGLTTQERERVLVLAATNRPFDLDEAVIR--RLPRRLMVGLPDTSNRAFILKVILAKE 1006
Query: 200 NVSPDVNFEELSRSTDDFNGAQCKAVCVEA 111
++SPD++ E++ T+ ++G+ K +CV A
Sbjct: 1007 DLSPDLDIGEIASMTNGYSGSDLKNLCVTA 1036
>At1g79560.1 68414.m09275 FtsH protease, putative contains similarity
to chloroplast FtsH protease GI:5804782 from [Nicotiana
tabacum]
Length = 1008
Score = 126 bits (303), Expect = 2e-29
Identities = 72/235 (30%), Positives = 129/235 (54%), Gaps = 5/235 (2%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
+ +L++ +++ M + ++ + +GVLL GPPGTGKTL AR A ++ F+ +G
Sbjct: 501 VWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGA 560
Query: 557 QLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTK--RFDSEKAGDREVQRTMLE 384
+ AK + + F++A+ APA +F+DE+DAI + R D + E L+
Sbjct: 561 EFTDSEKSGAAK-INEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLD 619
Query: 383 LLNQ---LDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 213
+ +D FS + I ATNR D LD +RSGR+DR++ P+ + R +I +H
Sbjct: 620 GEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVH 679
Query: 212 SRKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAI 48
S N++ D++F +L T F+GA + + EA ++++R+ + + +D +D +
Sbjct: 680 SAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVL 734
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 726
Score = 124 bits (298), Expect = 8e-29
Identities = 74/217 (34%), Positives = 126/217 (58%), Gaps = 3/217 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+ L E V+LP+ + F + P +G+LL+GPPGTGKT++A+A A + ++F+ ++
Sbjct: 424 ESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSMST 483
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-ELL 378
+ + G+ K VR F LA + +P IIF+DE+D++ +R + G+ E R + E +
Sbjct: 484 ITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQR---TRVGEHEAMRKIKNEFM 540
Query: 377 NQLDGFSSTAD--IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
DG S A I V+AATNR LD A++R R +R+I P+ E+R +I++ K
Sbjct: 541 THWDGLMSNAGDRILVLAATNRPFDLDEAIIR--RFERRIMVGLPSVESREKILRTLLSK 598
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 93
+ +++F+EL++ TD ++G+ K C A +R
Sbjct: 599 -EKTENLDFQELAQMTDGYSGSDLKNFCTTAAYRPVR 634
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 124 bits (298), Expect = 8e-29
Identities = 85/253 (33%), Positives = 137/253 (54%), Gaps = 18/253 (7%)
Frame = -1
Query: 722 EAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM 543
E V+ P+ + F P KG+LL+GPPGTGKT++ +A A + K+TF ++ L
Sbjct: 24 EMVIWPLLRPDIFKGCR-SPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSK 82
Query: 542 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM-LELLNQLD 366
+IG+G KLVR F +A + PA+IF+DE+D++ ++R + G+ E R + + L +++
Sbjct: 83 WIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQR---KSDGEHESSRRLKTQFLIEME 139
Query: 365 GFSSTAD-IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK--MNV 195
GF S ++ I +I ATNR LD A R RL +++ P P+ EARA I+Q +K +
Sbjct: 140 GFDSGSEQILLIGATNRPQELDEAARR--RLTKRLYIPLPSSEARAWIIQNLLKKDGLFT 197
Query: 194 SPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRS--------------ATAVTHEDFM 57
D + + T+ ++G+ K + +A M LR + VT +DF
Sbjct: 198 LSDDDMNIICNLTEGYSGSDMKNLVKDATMGPLREALKRGIDITNLTKDDMRLVTLQDFK 257
Query: 56 DAILEVQAKKKAN 18
DA+ EV+ N
Sbjct: 258 DALQEVRPSVSQN 270
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 829
Score = 122 bits (295), Expect = 2e-28
Identities = 72/217 (33%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+ L E V+LP+ + F + P +G+LL+GPPGTGKT+LA+A A + ++F+ ++
Sbjct: 531 ESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMST 590
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-ELL 378
+ + G+ K VR F LA + +P IIF+DE+D++ +R + G+ E R + E +
Sbjct: 591 ITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQR---TRVGEHEAMRKIKNEFM 647
Query: 377 NQLDGFSSTAD--IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
+ DG + I V+AATNR LD A++R R +R+I P E R +I++ K
Sbjct: 648 SHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRTLLAK 705
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 93
V +++++EL+ T+ + G+ K +C A +R
Sbjct: 706 EKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPVR 742
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 824
Score = 122 bits (295), Expect = 2e-28
Identities = 72/217 (33%), Positives = 123/217 (56%), Gaps = 3/217 (1%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+ L E V+LP+ + F + P +G+LL+GPPGTGKT+LA+A A + ++F+ ++
Sbjct: 526 ESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMST 585
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML-ELL 378
+ + G+ K VR F LA + +P IIF+DE+D++ +R + G+ E R + E +
Sbjct: 586 ITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQR---TRVGEHEAMRKIKNEFM 642
Query: 377 NQLDGFSSTAD--IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
+ DG + I V+AATNR LD A++R R +R+I P E R +I++ K
Sbjct: 643 SHWDGLMTKPGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPAVENREKILRTLLAK 700
Query: 203 MNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 93
V +++++EL+ T+ + G+ K +C A +R
Sbjct: 701 EKVDENLDYKELAMMTEGYTGSDLKNLCTTAAYRPVR 737
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 99 bits (238), Expect = 2e-21
Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 1/182 (0%)
Frame = -1
Query: 662 PKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 483
P+ VL GPPGTGKT AR A Q L + ++ + G+ +L+ F+ A E
Sbjct: 361 PRAVLFEGPPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQANELP 420
Query: 482 P-AIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDIL 306
AIIF+DE+DA R DSE +R + LL Q+DGF + VIAATNR L
Sbjct: 421 DGAIIFLDEIDAFAISR-DSEM--HEATRRVLSVLLRQIDGFEQEKKVVVIAATNRKQDL 477
Query: 305 DPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFNGAQCKA 126
DPAL+ R D I F P+ + R I+ ++++++ P++ +L+++T+ +G +
Sbjct: 478 DPALI--SRFDSMIMFDLPDLQTRQEIIAQYAKQLS-KPEL--VQLAQATEAMSGRDIRD 532
Query: 125 VC 120
VC
Sbjct: 533 VC 534
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 1025
Score = 97.9 bits (233), Expect = 6e-21
Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 3/209 (1%)
Frame = -1
Query: 728 LIEAVVLPMTHKEKFVNLGIHPP-KGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQL 552
L E V+LP E F + P G+LL+GP GTGKT+LA+A A + + + ++
Sbjct: 747 LKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVATEAGANLINMS---- 802
Query: 551 VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQ 372
+ + +G K V+ F+LA + +P+IIF+DE+ E R +T E +
Sbjct: 803 MSRWFSEGEKYVKAVFSLASKISPSIIFLDEV----------ESMLHRYRLKTKNEFIIN 852
Query: 371 LDGFSSTAD--IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 198
DG + + V+AATNR LD A++R RL ++ P+ +R++I+++ K +
Sbjct: 853 WDGLRTNEKERVLVLAATNRPFDLDEAVIR--RLPHRLMVGLPDARSRSKILKVILSKED 910
Query: 197 VSPDVNFEELSRSTDDFNGAQCKAVCVEA 111
+SPD + +E++ T+ ++G K +CV A
Sbjct: 911 LSPDFDIDEVASMTNGYSGNDLKNLCVTA 939
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 97.5 bits (232), Expect = 8e-21
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Frame = -1
Query: 737 IQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGP 558
++E I VV + + + F +G P+GVL+ G GTGKT LA A AA+ + + +
Sbjct: 432 MREEINEVVAFLQNPKAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQ 491
Query: 557 QL-VQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
+L +++G A VR+ F A++ AP IIF+++ D R ++ + + +L
Sbjct: 492 ELEAGLWVGQSAANVRELFQTARDLAPVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQL 551
Query: 380 LNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIM 222
L +LDGF + ++A T +D AL R GR+DR P E R RI+
Sbjct: 552 LVELDGFEKQDGVVLMATTRNHKQIDEALRRPGRMDRVFHLQSPTEMERERIL 604
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 77.8 bits (183), Expect = 7e-15
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 1/191 (0%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
+I+ L A +HK F N+ + YGPPGTGKT++AR A ++ + + G
Sbjct: 367 RIERLARATANTKSHKAPFRNM--------MFYGPPGTGKTMVAREIARKSGLDYAMMTG 418
Query: 560 PQLVQMFIGDGAKLVRDAFALAKEKAPA-IIFIDELDAIGTKRFDSEKAGDREVQRTMLE 384
+ + + + F AK+ ++FIDE DA +R + + E QR+ L
Sbjct: 419 GDVAPLG-AQAVTKIHEIFDWAKKSNKGLLLFIDEADAFLCERNSTYMS---EAQRSALN 474
Query: 383 LLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
L G + DI ++ ATNR LD A+ + R+D IEFP P EE R ++++++ K
Sbjct: 475 ALLFRTG-DQSRDIVLVLATNRPGDLDSAV--TDRIDEVIEFPLPGEEERFKLLKLYLNK 531
Query: 203 MNVSPDVNFEE 171
+ D E+
Sbjct: 532 YLMGDDKKGEK 542
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 74.9 bits (176), Expect = 5e-14
Identities = 51/154 (33%), Positives = 77/154 (50%)
Frame = -1
Query: 665 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 486
P + +L YGPPGTGKT+ AR A ++ + + G + + K+ + K K
Sbjct: 397 PFRNILFYGPPGTGKTMAARELARRSGLDYALMTGGDVAPLGAQAVTKIHQLFDWSKKSK 456
Query: 485 APAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDIL 306
++FIDE DA +R K E QR+ L L G + DI + ATNR L
Sbjct: 457 RGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTG-DQSKDIVLALATNRPGDL 512
Query: 305 DPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
D A+ + R+D +EFP P EE R +++ ++ K
Sbjct: 513 DSAV--ADRIDETLEFPLPGEEERFKLLNLYLEK 544
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 74.5 bits (175), Expect = 7e-14
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Frame = -1
Query: 665 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 486
P + ++ YGPPGTGKT++AR A ++ + + G + + + F AK+
Sbjct: 369 PFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLG-SQAVTKIHQIFDWAKKS 427
Query: 485 APA-IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDI 309
++FIDE DA +R + + E QR+ L L G + DI ++ ATNR
Sbjct: 428 NKGLLLFIDEADAFLCERNSTYMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRRGD 483
Query: 308 LDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
LD A+ + R+D IEFP P EE R +++ ++ K
Sbjct: 484 LDSAV--TDRIDEVIEFPLPGEEERFKLLNLYLNK 516
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 73.7 bits (173), Expect = 1e-13
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = -1
Query: 665 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKE- 489
P + +LL+GPPGTGKT+ AR A ++ + + G + + + + F K+
Sbjct: 396 PFRNILLHGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG-AQAVTKIHELFDWGKKS 454
Query: 488 KAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDI 309
K ++FIDE DA +R K E QR+ L L G + DI + ATNR
Sbjct: 455 KRGLLLFIDEADAFLCER---NKTYMSEAQRSALNALLFRTG-DQSKDIVLALATNRPGD 510
Query: 308 LDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRK 204
LD A+ + R+D +EFP P EE R +++ ++ K
Sbjct: 511 LDSAV--ADRVDEVLEFPLPGEEERFKLLNLYLEK 543
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 64.5 bits (150), Expect = 7e-11
Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 5/166 (3%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+++I+ + + KE + +G +G LLYGPPGTGK+ L A A +LK
Sbjct: 219 KKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKFDVFD 273
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR-FDSEKAGDREVQR--TMLE 384
L I D +L R L +I+ I+++D R ++E D +++ T+
Sbjct: 274 LELSSIYDNGELKR---VLLSTTNRSILVIEDIDCNAEVRDREAENQEDEQIKGKVTLSG 330
Query: 383 LLNQLDG-FSSTADIKVIA-ATNRVDILDPALLRSGRLDRKIEFPH 252
+LN +DG +SS D ++I TN + LDPALLR GR+D I +
Sbjct: 331 ILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSY 376
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 62.5 bits (145), Expect = 3e-10
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+++IE + + KE + +G +G LLYGPPGTGK+ L A A +LK
Sbjct: 229 RDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMA-----NYLKFDVYD 283
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFID---ELDAIGTKRFDSEKAGDREVQRTMLE 384
L + + L R A I ID +L + + + G+ + T+
Sbjct: 284 LQLASVMRDSDLRRLLLATRNRSILVIEDIDCAVDLPNRIEQPVEGKNRGESQGPLTLSG 343
Query: 383 LLNQLDG-FSSTADIKVIA-ATNRVDILDPALLRSGRLDRKIEFPH 252
LLN +DG +SS D ++I TN D LDPALLR GR+D I H
Sbjct: 344 LLNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIYMGH 389
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 62.1 bits (144), Expect = 4e-10
Identities = 54/166 (32%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Frame = -1
Query: 731 ELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQL 552
E+ +V KE + +G +G LLYGPPGTGK+ + A A K L +L
Sbjct: 213 EIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMANLMKYNIYDL---EL 269
Query: 551 VQMFIGDGAKLVRDAFALAKEKAPAIIFID-ELDAIG---TKRFDSEKAGDREVQRTMLE 384
IG+ +L + A + I ID LD G K +K G + T+
Sbjct: 270 TS--IGNNWELKKLLIATTNKSIIVIEDIDCSLDLTGEREVKDLKGDKEGKKSNAVTLSG 327
Query: 383 LLNQLDGFSSTADIK--VIAATNRVDILDPALLRSGRLDRKIEFPH 252
LLN +DG S + ++ TN V LD AL+R GR+D IE +
Sbjct: 328 LLNFIDGIWSACGQERILVFTTNHVGKLDQALIRRGRMDMHIELSY 373
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 60.1 bits (139), Expect = 2e-09
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+++I+ + + +E + +G +G LLYGPPGTGK+ L A A +LK
Sbjct: 220 KKIIDDMERFLKRREFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMA-----NYLKFDVFD 274
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQR------T 393
L I + A+L L +I+ I+++D + D E +E + T
Sbjct: 275 LELSSIYENAQL---KSILLSTTNRSILVIEDIDCSSAEVVDREADEYQEYEEGYYGRVT 331
Query: 392 MLELLNQLDG-FSSTADIKVIA-ATNRVDILDPALLRSGRLDRKIEFPH 252
+ LLN +DG +SS D ++I TN + LDPALLR GR+D I +
Sbjct: 332 LSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSY 380
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 58.8 bits (136), Expect = 3e-09
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 22/163 (13%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 480
+G LL+GPPGTGK+ + A A FL+ L + D A+L + + K
Sbjct: 229 RGYLLFGPPGTGKSTMISAIA-----NFLEYDVYDLELTTVKDNAELKK---LMLDTKGK 280
Query: 479 AIIFIDELDAI--------GTKRFDSEK------------AGDREVQRTMLELLNQLDG- 363
+I+ I+++D K D +K +G+ E T+ LLN +DG
Sbjct: 281 SIVVIEDIDCSLELTEHRKKKKEEDEDKEEKKEAENLKRVSGNNESNVTLSGLLNAIDGL 340
Query: 362 FSSTADIKVIA-ATNRVDILDPALLRSGRLDRKIEFPHPNEEA 237
+S+ +D K+I TN VD LDPAL+R GR+D IE + EA
Sbjct: 341 WSACSDEKIIIFTTNFVDNLDPALIRRGRMDYHIEMSYCRFEA 383
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 58.0 bits (134), Expect = 6e-09
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 25/250 (10%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K+ + +G +G LL+GPPGTGK+ + A A FL L + D ++L
Sbjct: 232 KDYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIA-----NFLDYDVYDLELTTVKDNSELK 286
Query: 515 RDAFALAKEKAPAIIFID-ELDAIGTKRFDSE-----------------KAGDREVQRTM 390
+ + I ID LD G ++ E K D++ + T+
Sbjct: 287 KLLLDTTSKSIIVIEDIDCSLDLTGQRKKKKEEDEEEDGEEKKEGEKKPKVDDKQSKVTL 346
Query: 389 LELLNQLDG-FSSTADIKVIA-ATNRVDILDPALLRSGRLDRKIEFPHPNEEA----RAR 228
LLN +DG +S+ + K+I TN VD LDPAL+R GR+D IE + EA
Sbjct: 347 SGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPALIRRGRMDNHIEMSYCKFEAFKVLAKN 406
Query: 227 IMQIHSRKMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHE-DFMDA 51
++I + + + EE S D E I ++R + E +
Sbjct: 407 YLEIETHDLYGEIERKLEETDMSPADVAETLMPKSDEEDADICIKRLVKTLEEEKEKARK 466
Query: 50 ILEVQAKKKA 21
+ E + KKKA
Sbjct: 467 LAEEEEKKKA 476
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 57.2 bits (132), Expect = 1e-08
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 11/177 (6%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA--- 564
+E++ ++ KE + +G +G LLYGPPGTGK+ + A A L
Sbjct: 217 EEIVNDLIAFSNGKEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTA 276
Query: 563 ---GPQLVQMFIGDGAK---LVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV 402
+L ++ +K ++ D A + I + ++ +R+ E + V
Sbjct: 277 VKNNSELKKLLTATSSKSIIVIEDIDCSADFTSNRI----KKESNSRERYGKEDKDENSV 332
Query: 401 QRTMLELLNQLDGFSSTADIK--VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 237
T+ LLN +DG S + V+ TN ++ LDPAL+R GR+D IE + EA
Sbjct: 333 --TLSGLLNFIDGIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELSYCTYEA 387
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 56.8 bits (131), Expect = 1e-08
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K+ + +G +G LL+GPPGTGK+ + A A FL+ L + D L
Sbjct: 229 KDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMA-----NFLEYDVYDLELTTVKDNTHLR 283
Query: 515 RDAFALAKEKAPAIIFIDELDAI------GTKRFDSEKAGD-----------------RE 405
R L + A +II I+++D K+ + E+ GD +E
Sbjct: 284 R---LLIETSAKSIIVIEDIDCSLNLTGQRKKKEEEEEDGDDKNTIEKKMMMKNEGENKE 340
Query: 404 VQRTMLELLNQLDGFSSTADIK--VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARA 231
+ T+ LLN +DG S + ++ TN VD LDPAL+R GR+D+ IE + EA
Sbjct: 341 SKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMSYCCFEA-- 398
Query: 230 RIMQIHSRKMNVSPDVNFEELSR 162
+ ++V FEE+ R
Sbjct: 399 -FKVLAKNYLDVEESEMFEEIKR 420
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 56.4 bits (130), Expect = 2e-08
Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K+ + +G +G LLYGPPGTGKT L A A +LK L + + A L
Sbjct: 234 KDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIA-----NYLKFDIYDLQLASVREDADLR 288
Query: 515 RDAFALAKEKAPAIIFIDELD-AIGTKRFDSEKAGDREVQRTMLE---LLNQLDG-FSST 351
R L +I+ ++++D A+ K D +ML LL +DG +SS
Sbjct: 289 R---LLLGTTNSSILLVEDIDCAVDLHTRLQPKTQDDTKGSSMLTLSGLLTCIDGLWSSC 345
Query: 350 ADIK-VIAATNRVDILDPALLRSGRLDRKIEFPH 252
D + VI T + LDPALLR GR+D I H
Sbjct: 346 GDERIVIFTTTHKERLDPALLRPGRMDMHIHMGH 379
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 56.4 bits (130), Expect = 2e-08
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 480
+G LLYGPPGTGK+ L A A L L + + A+L R + A
Sbjct: 248 RGYLLYGPPGTGKSSLIAAIANHLNFDIYDL---DLTS--LNNNAELRRLLMSTANRSIL 302
Query: 479 AIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG-FSSTADIKVIA-ATNRVDIL 306
+ ID + + D E T+ LLN +DG +SS + ++I TN + L
Sbjct: 303 VVEDIDCSIELKDRSTDQENNDPLHKTVTLSGLLNFVDGLWSSCGNERIIVFTTNYREKL 362
Query: 305 DPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEEL 168
DPALLR GR+D I H + A + S + + + FE++
Sbjct: 363 DPALLRPGRMDMHI---HMSYCTPAAFKVLASNYLEIQDHILFEQI 405
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 56.4 bits (130), Expect = 2e-08
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+E++ + KE + +G +G LL+GPPGTGK+ + A A + L +
Sbjct: 212 EEILNDLAAFSNGKEYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYDL---E 268
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFID-ELDAIG---------TKRFDSEKAGDRE 405
L I + ++L + A + + I ID LD G T R D E+ + +
Sbjct: 269 LTA--IRNNSELRKLLTATSSKSIIVIEDIDCSLDLTGKRKKEKNLMTSREDGEQGTEED 326
Query: 404 VQ-RTMLELLNQLDGFSSTADIK--VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 237
T+ LLN +DG S + +I TN + LDPAL+R GR+D IE + + EA
Sbjct: 327 KSFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFEA 385
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 56.0 bits (129), Expect = 2e-08
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K+ F +G +G LLYGPPGTGK+ L A A F+ + L + D A L
Sbjct: 20 KDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIA-----NFMNYSIYDLQIQSVKDDAMLR 74
Query: 515 RDAFALAKEKAPAIIFIDELDAIGT------KRFDSEKAGDREVQR-------TMLELLN 375
+ L + +I+ I++LD G + D + G+ + ++ T+ LLN
Sbjct: 75 Q---ILTSTENRSILLIEDLDCSGADTTCRKENKDETEYGENQNKKKKKDPKVTLSGLLN 131
Query: 374 QLDG-FSSTADIKVIA-ATNRVDILDPALLRSGRLD 273
+DG +SS + ++I TN + LDPALLR GR+D
Sbjct: 132 FVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMD 167
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 56.0 bits (129), Expect = 2e-08
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 26/179 (14%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K+ + +G +G LL+GPPGTGK+ + A A FL+ L + D ++L
Sbjct: 228 KDYYRKVGKPWKRGYLLFGPPGTGKSTMISAMA-----NFLEYDVYDLELTTVKDNSELK 282
Query: 515 RDAFALAKEKAPAIIFIDE----LDAIGT---------------KRFDSEKA-----GDR 408
+ + K +I+ I++ LD G K+ ++EK G+R
Sbjct: 283 K---LMLDTKGKSIVVIEDIDCSLDLTGQRKKKKEEDEDEEEEEKKKEAEKLLKRERGER 339
Query: 407 EVQRTMLELLNQLDG-FSSTADIKVIA-ATNRVDILDPALLRSGRLDRKIEFPHPNEEA 237
E + T+ LLN +DG +S+ + K+I TN +D LDPAL+R GR+D IE + EA
Sbjct: 340 ESKVTLSGLLNAIDGLWSACSGEKIIVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFEA 398
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 55.2 bits (127), Expect = 4e-08
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQ 555
+ +IE + + K+ + +G +G LLYGPPGTGK+ L A A K L Q
Sbjct: 221 RSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDIYDL---Q 277
Query: 554 LVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA-------IGTKRFDSEKAGDREVQR 396
L + G +R + LA + +I+ I+++D + S+ G +V +
Sbjct: 278 LASV---QGDAHLR-SLLLATNNS-SILLIEDIDCSVDLPTRLQPPTETSQPLGAVQVSK 332
Query: 395 --TMLELLNQLDG-FSSTADIKVIA-ATNRVDILDPALLRSGRLDRKIEFPH 252
T+ LLN +DG +SS + ++I TN + LDPALLR GR+D I H
Sbjct: 333 PLTLSGLLNCIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHIYMGH 384
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 55.2 bits (127), Expect = 4e-08
Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K+ F ++G +G LLYGPPGTGK+ + A A K L +Q DG +
Sbjct: 228 KDFFKSVGRAWKRGYLLYGPPGTGKSSMVAAIANHMKYHIYDLQ----IQSVRDDGE--L 281
Query: 515 RDAFALAKEKAPAIIFIDELD--AIGTKRFDSEK------AGDREVQR---------TML 387
R+ K + +I+ I+++D A ++R S+K D E Q+ ++
Sbjct: 282 REILTSTKNR--SILLIEDIDCGADASRRRQSKKKEEDGGEDDGEPQKRKKKFEVGISLS 339
Query: 386 ELLNQLDG-FSSTADIKVIA-ATNRVDILDPALLRSGRLD 273
LLN +DG +SS + K+I TN + LDPALLR GR+D
Sbjct: 340 GLLNFVDGLWSSCGEEKIIIFTTNHKEKLDPALLRPGRMD 379
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 54.8 bits (126), Expect = 6e-08
Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K+ + +G +G LLYGPPGTGK+ + A A L + L I + ++L
Sbjct: 225 KDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMA-----NLLNYSIYDLELTAIQNNSELR 279
Query: 515 RDAFALAKEKAPAIIFID-ELDAIG-TKRFDS-----EKAGDREVQR-----TMLELLNQ 372
+ A + + I ID LD G K+ +S K GD++ + T+ LLN
Sbjct: 280 KILTATSNKSIIVIEDIDCSLDLTGKRKKKESNLMIWRKDGDQDNEENKSFVTLSGLLNF 339
Query: 371 LDGFSSTADIK--VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 237
+DG S + ++ TN + LDPAL+R GR+D IE + EA
Sbjct: 340 IDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEA 386
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 53.2 bits (122), Expect = 2e-07
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA------GPQLVQMFIG 534
K+ + +G +G LL+GPPGTGK+ + A A + L +L ++ I
Sbjct: 232 KDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANLLEYDVYDLELTTVKDNTELRRLLIE 291
Query: 533 DGAKLV---------RDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLEL 381
K + D K+K DE I K+ ++ ++ + T+ L
Sbjct: 292 TSGKSIIVIEDIDCSLDLTGQRKQKKDEEEDEDETSPI-EKQMKKDQGENKGSKVTLSGL 350
Query: 380 LNQLDGFSSTADIK--VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEA 237
LN +DG S + ++ TN +D LDPAL+R GR+D+ IE + EA
Sbjct: 351 LNFIDGLWSACGGERIIVFTTNFIDKLDPALIRKGRMDKHIEMSYCGFEA 400
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 50.8 bits (116), Expect = 9e-07
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K+ + +G + LYGPPGTGK+ L A A K L QL + GD A+L
Sbjct: 209 KDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMANYLKFDIYDL---QLANVQ-GD-AQL- 262
Query: 515 RDAFALAKEKAPAIIFIDELDA---IGTKRFDSEK---AGDREVQRTMLELLNQLDG-FS 357
+ LA + +I+ ++++D + T+ + A T+ LLN +DG +S
Sbjct: 263 -RSLLLATNNS-SILLVEDIDCSVDLPTRLQPATTTLGAPKGSTPLTLSGLLNCIDGLWS 320
Query: 356 STADIK-VIAATNRVDILDPALLRSGRLDRKIEFPH 252
S D + VI TN ++LDPALLR G +D I H
Sbjct: 321 SCGDERIVIFTTNNKEVLDPALLRPGCMDMHIYLGH 356
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 50.0 bits (114), Expect = 2e-06
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 11/147 (7%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 480
+G LLYGPPGTGK+ L A A L +L + + ++L R A A
Sbjct: 300 RGYLLYGPPGTGKSSLIAAMANHLNFDIYDL---ELTA--VNNNSELRRLLIATANR--- 351
Query: 479 AIIFIDELD-AIGTKRFDSE----KAGDREVQR----TMLELLNQLDG-FSSTADIKVIA 330
+I+ ++++D ++ K S+ ++ D E R T+ LLN +DG +SS D ++I
Sbjct: 352 SILIVEDIDCSLELKDRTSDEPPRESDDIEDPRYKKVTLSGLLNFIDGLWSSCGDERIII 411
Query: 329 -ATNRVDILDPALLRSGRLDRKIEFPH 252
TN + LD ALLR GR+D I +
Sbjct: 412 FTTNYKEKLDAALLRPGRMDMHIHMSY 438
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 44.8 bits (101), Expect = 6e-05
Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 480
+G LLYGPPGTGK+ + A A + L +L + + ++L + L K +
Sbjct: 238 RGYLLYGPPGTGKSSMIAAMANYLRYDIYDL---ELTE--VKSNSELRK---LLMKTSSK 289
Query: 479 AIIFIDELD-AIG-TKRFDSEKAGDREVQR-----------------TMLELLNQLDGFS 357
+II I+++D +I T R + G T+ LLN DG
Sbjct: 290 SIIVIEDIDCSINLTNRNKKQSTGSYNEPEMLTGSGLGDDLGDGNTITLSGLLNFTDGLW 349
Query: 356 STADIK--VIAATNRVDILDPALLRSGRLDRKIEFPHPN-EEARARIMQIHSRKMNVSPD 186
S + + TN ++ LDPALLRSGR+D I + + + + D
Sbjct: 350 SCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLND 409
Query: 185 VNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKKK 24
V +EL+ D A+ V +I RR E +D V+ +K
Sbjct: 410 VVLKELAEVVD---RAEITPADVSEALIKNRRDKERAVRELLVDLRSRVERNEK 460
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 43.6 bits (98), Expect = 1e-04
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 15/160 (9%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTK---------STFLKLAGPQLVQMFIGDGAKLVRDAFA 501
+LL+GPPGTGKT L +A A + +++ L + + KLV F
Sbjct: 205 ILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQ 264
Query: 500 LAKEKAP-----AIIFIDELDAIGTKRFDSEKAGD-REVQRTMLELLNQLDGFSSTADIK 339
+E + IDE++++ R + + + R + LL Q+D S ++
Sbjct: 265 KIQEMVEEDGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSAPNVI 324
Query: 338 VIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQ 219
++ +N +D A + R D K P R I++
Sbjct: 325 ILTTSNITTAIDVAFV--DRADIKAYVGPPTLHVRYEILR 362
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 42.7 bits (96), Expect = 2e-04
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAP 480
+G LLYGPPGTGK+ L A A L +L + + + ++L + L K +
Sbjct: 239 RGYLLYGPPGTGKSSLIAAMANYLGYDIYDL---ELTE--VQNNSELRK---LLMKTSSK 290
Query: 479 AIIFIDELD-AIG-TKRFDSEKA-GDREVQR---------------TMLELLNQLDG-FS 357
+II I+++D +I TKR ++K G E T+ LLN DG +S
Sbjct: 291 SIIVIEDIDCSISLTKRGKNKKKNGSYEYDPGLTNGSGLEEPGSSVTLSGLLNFTDGLWS 350
Query: 356 STADIKV-IAATNRVDILDPALLRSGRLDRKI 264
K+ + TN ++ LD AL+RSGR+D +
Sbjct: 351 CCGSEKIFVFTTNHIEKLDSALMRSGRMDMHV 382
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 41.9 bits (94), Expect = 4e-04
Identities = 35/102 (34%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM-FIGDGA-----KLVRDAFALAK 492
VLL GP G+GKTLLA+ A F+ L Q ++GD KL+ A +
Sbjct: 311 VLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQ 370
Query: 491 EKAPAIIFIDELDAIGTKRFD----SEKAGDREVQRTMLELL 378
I++IDE+D I TK+ + S VQ+ +L+LL
Sbjct: 371 AAQQGIVYIDEVDKI-TKKAESLNISRDVSGEGVQQALLKLL 411
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 41.5 bits (93), Expect = 6e-04
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV 516
K+ + LG + LLYGP GTGK+ A A FL ++ D +K+V
Sbjct: 220 KQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMA-----NFLDY------DVYDIDLSKVV 268
Query: 515 RDA---FALAKEKAPAIIFIDELDA-IGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTA 348
D+ L + + ++I I++LD + TK +G ++L S TA
Sbjct: 269 DDSDLKMLLLQTRGKSVIVIEDLDRHLSTKSTAVNLSGILNFTDSILS--------SCTA 320
Query: 347 DIKVIAAT-NRVDILDPALLRSGRLDRKIEFP 255
D +++ T + +DPA+LR GR+D I FP
Sbjct: 321 DERIMVFTMTGKEQIDPAMLRPGRVDVHIHFP 352
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 41.1 bits (92), Expect = 7e-04
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM-FIGDGA-----KLVRDAFALAK 492
VLL GP G+GKTLLA+ A F L Q ++G+ KL + +
Sbjct: 265 VLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLYVVSGCNVE 324
Query: 491 EKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 363
E I++IDE+D + K S D + LL L+G
Sbjct: 325 EAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEG 367
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 38.7 bits (86), Expect = 0.004
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM-FIGDGA-----KLVRDAFALAK 492
+LL GP G+GKTLLA+ A F+ L Q ++G+ KL+ A
Sbjct: 226 ILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVA 285
Query: 491 EKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 363
I++IDE+D I K + D + LL L+G
Sbjct: 286 AAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 328
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -1
Query: 395 TMLELLNQLDGFSSTADIK--VIAATNRVDILDPALLRSGRLDRKI 264
T+ LLN DG S + + TN ++ LDPALLRSGR+D I
Sbjct: 346 TLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHI 391
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACA 597
+G LLYGPPGTGK+ + A A
Sbjct: 238 RGYLLYGPPGTGKSSMIAAMA 258
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTK 585
+++IE + + KE + +G +G LLYGPPGTGK+ L A A K
Sbjct: 229 RDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLK 278
>At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00023
ankyrin repeat, PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 481
Score = 35.9 bits (79), Expect = 0.028
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 7/188 (3%)
Frame = -1
Query: 740 QIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFL---- 573
Q+++ + ++L + +N+G P + G PGTGKT++AR + +
Sbjct: 219 QLRKWAKGMLLDERRRALGLNIGTRRPPHMAFLGNPGTGKTMVARVLGKLLNTVGILPTD 278
Query: 572 ---KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREV 402
++ LV F+G R +E I+F+DE + +KA D++
Sbjct: 279 KVTEVQRTDLVGEFVGHTGPKTRRKI---QEAEGGILFVDE----AYRLIPMQKADDKDY 331
Query: 401 QRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIM 222
LE L ++ T I VI A + G R +F + ++ + +
Sbjct: 332 G---LEALEEIMSVMDTGKIVVIFAGYSEPMKRVIASNEGFCRRVTKFFNFSDFSAKELA 388
Query: 221 QIHSRKMN 198
QI KMN
Sbjct: 389 QILHIKMN 396
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 34.7 bits (76), Expect = 0.065
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQM-FIGDGAKLVRDAFALAKE---- 489
++ +GPPGTGKT +A++ +K L + V + + G K VRDA AK
Sbjct: 140 IVFWGPPGTGKTSIAKSLINSSKDPSLY----RFVSLSAVTSGVKDVRDAVESAKRLNLE 195
Query: 488 -KAPAIIFIDELDAIGTKRFDS 426
+ ++F+DE+ + D+
Sbjct: 196 GRKRTVLFMDEVHRFNKSQQDT 217
>At4g31860.2 68417.m04527 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase 2C, Schizosaccharomyces
pombe, PIR2:S54297
Length = 275
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 658 KEFFYMDLLVQGRHCWRELALLKQSLHF*SWLVHNL 551
K FF MD ++QG+ WRELA+L ++ S ++ L
Sbjct: 93 KAFFRMDEMMQGQRGWRELAVLGDKINKFSGMIEGL 128
>At4g31860.1 68417.m04526 protein phosphatase 2C, putative / PP2C,
putative protein phosphatase 2C, Schizosaccharomyces
pombe, PIR2:S54297
Length = 357
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 658 KEFFYMDLLVQGRHCWRELALLKQSLHF*SWLVHNL 551
K FF MD ++QG+ WRELA+L ++ S ++ L
Sbjct: 93 KAFFRMDEMMQGQRGWRELAVLGDKINKFSGMIEGL 128
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 680 NLGIHPPKGVLLYGPPGTGKTLLARACAAQ-TKSTFLKLAGP 558
N G PP V++ GPPG GK+L+ ++ + TK ++ GP
Sbjct: 77 NYGEAPPFVVVVQGPPGVGKSLVIKSLVKEFTKQNVPEVRGP 118
>At2g39730.3 68415.m04879 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 441
Score = 32.3 bits (70), Expect = 0.35
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Frame = -1
Query: 647 LYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 480
++G G GK+ A+ + ++ +L G+ AKL+ R+A L K+
Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222
Query: 479 AIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---SSTADIKVI 333
+FI++LDA G R ++ V T++ + + QL G A + +I
Sbjct: 223 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPII 281
Query: 332 AATNRVDILDPALLRSGRLDR 270
N L L+R GR+++
Sbjct: 282 CTGNDFSTLYAPLIRDGRMEK 302
>At2g39730.2 68415.m04878 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 446
Score = 32.3 bits (70), Expect = 0.35
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Frame = -1
Query: 647 LYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 480
++G G GK+ A+ + ++ +L G+ AKL+ R+A L K+
Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222
Query: 479 AIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---SSTADIKVI 333
+FI++LDA G R ++ V T++ + + QL G A + +I
Sbjct: 223 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPII 281
Query: 332 AATNRVDILDPALLRSGRLDR 270
N L L+R GR+++
Sbjct: 282 CTGNDFSTLYAPLIRDGRMEK 302
>At2g39730.1 68415.m04877 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 474
Score = 32.3 bits (70), Expect = 0.35
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Frame = -1
Query: 647 LYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 480
++G G GK+ A+ + ++ +L G+ AKL+ R+A L K+
Sbjct: 163 IWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKM 222
Query: 479 AIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---SSTADIKVI 333
+FI++LDA G R ++ V T++ + + QL G A + +I
Sbjct: 223 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPII 281
Query: 332 AATNRVDILDPALLRSGRLDR 270
N L L+R GR+++
Sbjct: 282 CTGNDFSTLYAPLIRDGRMEK 302
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1
Query: 689 KFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQT 588
+ V+L + + VLLYGP G+GK+ L R A ++
Sbjct: 344 EMVSLAVSQKRPVLLYGPSGSGKSALIRKLADES 377
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQL--VQMFIG-----DGAKLVRDAFALA 495
VLL GP +GKT L + AA + + F+++ + +Q ++G KLV AL
Sbjct: 1075 VLLQGPTSSGKTSLVKYLAAISGNKFVRINNHEQTDIQEYLGSYMTDSSGKLVFHEGALV 1134
Query: 494 KE-KAPAIIFIDELD 453
K + I +DEL+
Sbjct: 1135 KAVRGGHWIVLDELN 1149
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQ--TKSTFLKLAGPQL 552
K +LL GPPGTGKT LA + + +K F + G ++
Sbjct: 67 KALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEV 104
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
I P + LL GPP +GKT L +A A + T L+++G
Sbjct: 196 IKPSRMTLLLGPPSSGKTTLLQALAGKLDDT-LQMSG 231
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 31.9 bits (69), Expect = 0.46
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQT-----KSTFLKL-----AGPQLVQMFIGDGAKLVRDAF 504
+LLYGPPGTGKT A A + ++ L+L G +V+ I D A +F
Sbjct: 75 LLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDVVRQQIQDFAS--TQSF 132
Query: 503 ALAKEKAPAIIFIDELDAI 447
+L K ++ +DE DA+
Sbjct: 133 SLGKSSV-KLVLLDEADAM 150
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQ 591
+L YGPPGTGKT A A A Q
Sbjct: 33 MLFYGPPGTGKTTTALAIAHQ 53
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQ 591
+L YGPPGTGKT A A A Q
Sbjct: 45 MLFYGPPGTGKTTTALAIAHQ 65
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKS 582
I P + LL GPPG+GK+ L +A + +T++
Sbjct: 169 IKPGRLTLLLGPPGSGKSTLLKALSGKTET 198
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 31.5 bits (68), Expect = 0.61
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 4/177 (2%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTF-LKLAGPQLVQMFIGDGAKLVRDAFALAKEKA 483
K + ++GPPG GKT +AR+ Q F L + + + +++
Sbjct: 259 KTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKTAYTIPACSDDYYEKLQLQQRF 318
Query: 482 PAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLN---QLDGFSSTADIKVIAATNRVD 312
+ I E I E+ D++V +++ +N Q+D + D + +
Sbjct: 319 LSQITNQENVQIPHLGVAQERLNDKKV-LVVIDDVNQSVQVDALAKENDWLGPGSRIIIT 377
Query: 311 ILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELSRSTDDFNG 141
D +LR+ ++ E +PN E +I +H+ SP FEEL++ +G
Sbjct: 378 TQDRGILRAHGIEHIYEVDYPNYEEALQIFCMHAFGQK-SPYDGFEELAQQVTTLSG 433
>At1g66950.1 68414.m07612 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1454
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
+ P + LL GPP +GKT L +A A + T L+++G
Sbjct: 198 VKPSRMTLLLGPPSSGKTTLLQALAGKLDDT-LQMSG 233
>At4g28070.1 68417.m04026 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 464
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -1
Query: 689 KFVN-LGIHPPKGVLLYGPPGTGKTLL 612
KFV+ + P KG+ LYG GTGKT+L
Sbjct: 123 KFVSHSSVSPVKGLYLYGGVGTGKTML 149
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 704 MTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 576
M + + L + + + ++GPPG GKT +AR +Q +F
Sbjct: 209 MENMRALLRLDLDDVRMIGIWGPPGIGKTTIARFLLSQVSKSF 251
>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 647 LYGPPGTGKTLLARACAAQTKSTF 576
+YGP G GKT +ARA ++ S+F
Sbjct: 215 IYGPAGIGKTTIARALHSRLSSSF 238
>At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial
(LON) identical to Lon protease homolog 1 mitochondrial
precursor SP:O64948 from [Arabidopsis thaliana]
Length = 888
Score = 30.3 bits (65), Expect = 1.4
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Frame = -1
Query: 641 GPPGTGKTLLARACAAQTKSTFLKLAGPQLV---------QMFIGDGAKLVRDAFALAKE 489
GPPG GKT LA + AA F++L+ + + +IG + D
Sbjct: 408 GPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 467
Query: 488 KAPAIIFIDELDAIGTK-RFDSEKAGDREVQRTMLELLNQ--LDGFSSTADIKVIAATNR 318
P ++ +DE+D G+ R D A + + N L+ + + +A NR
Sbjct: 468 CNP-VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNVPYDLSKVVFVATANR 526
Query: 317 VDILDPALLRSGRLDRKIEFPHPNEEARARIMQIH 213
V + P LL L IE P +E + +I H
Sbjct: 527 VQPIPPPLLDRMEL---IELPGYTQEEKLKIAMRH 558
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +3
Query: 444 TNSVQFINEDDCWCLLFSQCKGVADKLGTITNEHLHKL-----WTSQLQKCRLCLSSASS 608
T S+ +DD C + + D+LGTI +H++ + W C +C +SA
Sbjct: 462 TGSISLYKDDDIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEE 521
Query: 609 RQ 614
+
Sbjct: 522 EK 523
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 734 QELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACA 597
+ LI+ + L ++ ++ + +G H + LL+G PG GKT L A A
Sbjct: 175 RRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIA 220
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 716 VVLPMTHKE---KFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 570
++ P HK K ++ I P + LL GPPG+GK+ L A A + + K
Sbjct: 165 IIKPRKHKLNILKDISGIIKPGRMTLLLGPPGSGKSTLLLALAGKLDKSLKK 216
>At2g25070.1 68415.m02999 protein phosphatase 2C, putative / PP2C,
putative
Length = 355
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 658 KEFFYMDLLVQGRHCWRELALLKQSLH 578
+ FF MD ++QG+ WRELA+L ++
Sbjct: 93 RAFFRMDDMMQGQRGWRELAVLGDKMN 119
>At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Non-consensus TT donor splice site at exon 1
Length = 1104
Score = 29.9 bits (64), Expect = 1.9
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Frame = -1
Query: 704 MTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGA 525
+T + F+ L K + ++GP G GKT +ARA Q + F + + D +
Sbjct: 192 LTKLDSFLCLESDDVKMIGIWGPAGIGKTTIARALFNQLSTGFRLSCFMGTIDVNDYD-S 250
Query: 524 KLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM--LELLNQLDGFSST 351
KL L+K + I L AI E ++ V + ++ L QL+ +
Sbjct: 251 KLCLQNKLLSKILNQKDMKIHHLGAI------EEWLHNQRVLIVLDDVDDLEQLEVLAKE 304
Query: 350 ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEE 171
+ + V + D +L++ ++ + P+EE I+ + + K N SP FEE
Sbjct: 305 SSWFGHGSRIIVSLNDRKILKAHGINDIYDVDFPSEEEALEILCLSAFKQN-SPQDGFEE 363
Query: 170 LSRSTDDFNG 141
+++ + G
Sbjct: 364 VAKRVVELCG 373
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
+ P + LL GPPG GKT L +A + + S +K+ G
Sbjct: 164 VRPGRMTLLLGPPGCGKTTLLQALSGKF-SDSVKVGG 199
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
+ P + LL GPPG GKT L +A + + S +K+ G
Sbjct: 161 VRPGRMTLLLGPPGCGKTTLLQALSGRL-SHSVKVGG 196
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 692 EKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 576
E+ + L + + + ++GPPG GKT +AR Q F
Sbjct: 279 EQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 692 EKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 576
E+ + L + + + ++GPPG GKT +AR Q F
Sbjct: 279 EQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 692 EKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 576
E+ + L + + + ++GPPG GKT +AR Q F
Sbjct: 279 EQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDRF 317
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 692 EKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 576
E+ + L + + + ++GPPG GKT +AR Q F
Sbjct: 283 EQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDRF 321
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
I P + LL GPP +GKT L A A + + LK+ G
Sbjct: 170 IKPSRMTLLLGPPSSGKTTLLLALAGKLDQS-LKVTG 205
>At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 531
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 704 MTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 576
M E+ + L ++ + + ++GPPG GKT +AR + +F
Sbjct: 247 MKKLERMLYLDLNDVRMIGIWGPPGIGKTSIARVLFRKHSDSF 289
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
I P + LL GPPG GKT L +A + ++ LK G
Sbjct: 162 ISPGRLTLLLGPPGCGKTTLLKALSGNLENN-LKCYG 197
>At1g63870.1 68414.m07233 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1031
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 704 MTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTF 576
+T E ++L K V + GP G GKT +ARA ++ + F
Sbjct: 197 LTEMESLLDLDYDGVKMVGISGPAGIGKTTIARALQSRLSNKF 239
>At5g46470.1 68418.m05723 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1127
Score = 29.5 bits (63), Expect = 2.4
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 7/187 (3%)
Frame = -1
Query: 704 MTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLV----QMFI 537
+T ++L + V ++GP G GKT +ARA ++ F V M +
Sbjct: 194 ITKMSSLLHLESEEVRMVGIWGPSGIGKTTIARALFSRLSCQFQSSVFIDKVFISKSMEV 253
Query: 536 GDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFS 357
GA LV L ++A D+ D I EK +++ L+ D
Sbjct: 254 YSGANLVDYNMKLHLQRAFLAEIFDKKD-IKIHVGAMEKMVKHRKALIVIDDLDDQDVLD 312
Query: 356 STAD-IKVIAATNRVDIL--DPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPD 186
+ AD + + +R+ ++ + LR+ R+D + P+ + + K N PD
Sbjct: 313 ALADQTQWFGSGSRIIVVTENKHFLRANRIDHIYKVCLPSNALALEMFCRSAFKKNSPPD 372
Query: 185 VNFEELS 165
+F ELS
Sbjct: 373 -DFLELS 378
>At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 381
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 249 GMRKFDFSVQTSRSEQGRVQNVHSIGSCNDLDV 347
G R DFSV + + Q R +N +GS DLD+
Sbjct: 341 GGRLSDFSVAAAAAAQARDKNSFEVGSSGDLDL 373
>At4g30490.1 68417.m04329 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 497
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 665 PPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 570
P KG+ LYG GTGKT+L Q T+ K
Sbjct: 160 PVKGLYLYGGVGTGKTMLMDLFFDQLPCTWKK 191
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 695 KEKFVNLGIHPPKGVLLYGPPGTGKT 618
+++ +++G+ VL+ GPPGTGKT
Sbjct: 262 QKEAIDVGLSRKSFVLIQGPPGTGKT 287
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 683 VNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
VN I P + LL GPP GKT L +A + ++ LK +G
Sbjct: 193 VNGIIKPGRLTLLLGPPSCGKTTLLKALSGNLENN-LKCSG 232
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 647 LYGPPGTGKTLLARACAAQTKSTF 576
+ GPPG GKT +ARA Q F
Sbjct: 219 IVGPPGIGKTTIARALRDQISENF 242
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQ 591
I P + LL GPPG GKT L A + +
Sbjct: 159 IRPKRMTLLLGPPGCGKTTLLLALSGR 185
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQ--TKSTFLKLAGPQLVQM 543
+ +L+ G PGTGKT +A A ++ F +AG ++ +
Sbjct: 67 RAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSL 107
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 674 GIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 564
G K + L GPPG GKT + R+ A F + +
Sbjct: 453 GTSQGKIICLSGPPGVGKTSIGRSIARALNRKFFRFS 489
>At4g25750.1 68417.m03707 ABC transporter family protein Bactrocera
tryoni membrane transporter (white) gene, PID:g3676298
Length = 577
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 683 VNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKST 579
+ L HP + + + GP G GK+ L AA+T T
Sbjct: 34 ITLTSHPSQILAIIGPSGAGKSTLLDILAARTSPT 68
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -1
Query: 731 ELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQ 591
E ++AV + + P L GP G GKT LA+A A Q
Sbjct: 541 EAVKAVAAAILRSRVGLGRPQQPSGSFLFLGPTGVGKTELAKALAEQ 587
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
I P + LL GPP +GKT L A A + T L+ +G
Sbjct: 158 IRPSRLTLLLGPPSSGKTTLLLALAGRL-GTNLQTSG 193
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 647 LYGPPGTGKTLLARACAAQTKSTF 576
++GPPG GKT +AR Q +F
Sbjct: 262 IWGPPGIGKTTIARVVYNQLSHSF 285
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 674 GIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLA 564
G K + L GPPG GKT + R+ A F + +
Sbjct: 436 GTSQGKIICLSGPPGVGKTSIGRSIARALDRKFFRFS 472
>At2g34680.1 68415.m04260 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; identical to cDNA hypothetical protein
(AIR9) mRNA, partial cds GI:3695020
Length = 1661
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 385 SNIVRCTSRSPAFSESKRFVPIASSSSMKMIAGAFSLANAKASRTSLAPSPMNICTSCGP 564
S++ T P+ SESK+ VP++ S + FSL+ ++S A M++ S
Sbjct: 125 SSLSAKTVSKPSLSESKKSVPVSPGSRSLTKSTGFSLSKPESS----ARPAMSVSVSSKR 180
Query: 565 ASFKNVD 585
A +VD
Sbjct: 181 APSSSVD 187
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAG 561
I P + LL GPP +GKT L A A + + L+++G
Sbjct: 194 IKPGRMTLLLGPPSSGKTTLLLALAGKLDKS-LQVSG 229
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 647 LYGPPGTGKTLLARACAAQTKSTF 576
++GPPG GKT + R Q S+F
Sbjct: 256 IWGPPGIGKTTIVRFLYNQLSSSF 279
>At1g63160.1 68414.m07138 replication factor C 40 kDa, putative
similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit
(Replication factor C 40 kDa subunit, A1 40 kDa subunit,
RF-C 40 kDa subunit, RFC40) [Mus musculus]
Length = 333
Score = 27.9 bits (59), Expect = 7.5
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRD---AFALAKEKA 483
++L GPPGTGKT A A + T K A +L G +VR+ FA K
Sbjct: 51 LILSGPPGTGKTTSILALAHELLGTNYKEAVLEL-NASDDRGIDVVRNKIKMFAQKKVTL 109
Query: 482 P----AIIFIDELDAI 447
P ++ +DE D++
Sbjct: 110 PPGRHKVVILDEADSM 125
>At1g33290.2 68414.m04118 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 303
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 570
+H K +L G PG GKT + R A F K
Sbjct: 161 LHYGKSILFVGRPGVGKTTVLREIARVLSDEFQK 194
>At1g33290.1 68414.m04117 sporulation protein-related isoform
contains non-consensus AT-donor acceptor site at intron
6; similar to Stage III sporulation protein AA.
(Swiss-Prot:Q01367) [Bacillus subtilis]; similar to
SpoIIIAA (GI:1303904) [Bacillus subtilis]; similar to
stage III sporulation protein AA (GI:18145497)
[Clostridium perfringens str. 13]
Length = 379
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLK 570
+H K +L G PG GKT + R A F K
Sbjct: 161 LHYGKSILFVGRPGVGKTTVLREIARVLSDEFQK 194
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQ 591
+ P + LL GPP +GKT L A A +
Sbjct: 192 VKPSRMTLLLGPPSSGKTTLLLALAGK 218
>At5g52860.1 68418.m06561 ABC transporter family protein
Length = 589
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 683 VNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKST 579
+ L HP + + + GP G GK+ L A++T T
Sbjct: 48 ITLTAHPTEILAVVGPSGAGKSTLLDILASKTSPT 82
>At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1187
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 647 LYGPPGTGKTLLARACAAQTKSTF 576
++G PG GKT LA+A Q S F
Sbjct: 177 IWGMPGIGKTTLAKAVFDQMSSAF 200
>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1085
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTF 576
K + ++GP G GK+ +ARA Q S+F
Sbjct: 208 KMIGIWGPAGIGKSTIARALYNQLSSSF 235
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 659 KGVLLYGPPGTGKTLLARACAAQTKSTF 576
K + ++GP G GKT +ARA Q + F
Sbjct: 206 KMIGIWGPAGIGKTTIARALYNQLSTNF 233
>At2g31320.1 68415.m03824 poly [ADP-ribose] polymerase, putative /
NAD(+) ADP-ribosyltransferase, putative /
poly[ADP-ribose] synthetase, putative similar to
poly(ADP)-ribose polymerase [Zea mays] GI:3928871 ;
contains Pfam profiles PF00644: Poly(ADP-ribose)
polymerase catalytic domain, PF00645: Poly(ADP-ribose)
polymerase and DNA-Ligase Zn-finger region, PF02877:
Poly(ADP-ribose) polymerase, regulatory domain, PF00533:
BRCA1 C Terminus (BRCT) domain
Length = 983
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/74 (29%), Positives = 29/74 (39%)
Frame = +3
Query: 21 GLFLSLDLQYGVHKVFVSDGSC*TSQRYHTSFDADRLALGAIEIISRTRQFFEINVWTYI 200
G FL LD+ YGV+K TS S L +E FEIN+ + +
Sbjct: 609 GKFLPLDIDYGVNKQVAKKEPFQTSSNLAPSLIELMKMLFDVETYRSAMMEFEINM-SEM 667
Query: 201 HFTGMDLHNSGSGF 242
+ HN GF
Sbjct: 668 PLGKLSKHNIQKGF 681
>At1g79950.1 68414.m09344 helicase-related similar to BRCA1-binding
helicase-like protein BACH1 (GI:13661819) Homo
sapiens].; contains similarity to helicase-like protein
NHL GI:6969265 from (Homo sapiens)
Length = 1040
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 268 FRSKRPDL-SRAGSKMSTLLVAAMTLMSAVELNPSSWFNNSNIVRCTSRSPAFSESKRFV 444
FR++R + +R ++ +V+ + + ++E NP+ F NSN+ S + F
Sbjct: 768 FRTERSNFPARLVTEQENNIVSTLLPVESIEDNPTPAFGNSNLKNVGVAQNELSRLEAFP 827
Query: 445 PIASSSSMK 471
P +S ++
Sbjct: 828 PANRASPLE 836
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 662 PKGVLLY-GPPGTGKTLLARACAAQ 591
P G L+ GP G GKT LA+A A Q
Sbjct: 598 PTGSFLFLGPTGVGKTELAKALAEQ 622
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 653 VLLYGPPGTGKTLLARACAAQTKSTFLK 570
+LL GPPG GKT + R A + + K
Sbjct: 200 LLLIGPPGVGKTTMIREVARMLGNDYEK 227
>At1g62390.1 68414.m07039 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat
(TPR)-containing protein contains Pfam profiles PF00564:
PB1 domain, PF00515: TPR Domain
Length = 751
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = -1
Query: 602 CAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAII-----FIDELDAIGTK 438
CAA+ + + AG ++V + + V++ + LAKEK + F + L A+G +
Sbjct: 521 CAARKRIPLDESAGKEVVAAQLQTAYEWVKERYTLAKEKYEQALSIKPDFYEGLLALGQQ 580
Query: 437 RFDSEK 420
+F+ K
Sbjct: 581 QFEMAK 586
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 671 IHPPKGVLLYGPPGTGKTLLARACAAQ 591
+ P + LL GPP +GKT L A A +
Sbjct: 177 VKPGRMALLLGPPSSGKTTLLLALAGK 203
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,350,007
Number of Sequences: 28952
Number of extensions: 389375
Number of successful extensions: 1618
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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