Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j10f
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 229 2e-60
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 39 0.003
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 35 0.038
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 35 0.038
U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop heli... 33 0.15
U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop heli... 33 0.20
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 32 0.27
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 32 0.36
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 32 0.36
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 32 0.36
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 31 0.62
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 31 0.62
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 31 0.82
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 30 1.4
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 29 1.9
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 1.9
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 1.9
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 29 1.9
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 29 1.9
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 29 1.9
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 29 2.5
U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical pr... 29 2.5
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 29 2.5
AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical... 29 2.5
U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical... 29 3.3
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 28 4.4
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 28 4.4
AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical... 28 4.4
U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormon... 28 5.8
U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormon... 28 5.8
AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear recep... 28 5.8
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 5.8
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 7.7
L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu... 27 7.7
L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical pr... 27 7.7
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 7.7
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 7.7
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 229 bits (559), Expect = 2e-60
Identities = 112/154 (72%), Positives = 133/154 (86%)
Frame = +2
Query: 134 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 313
E+A+ EE+L+M T+++ SRT LLDNEI+IM+SEV RI+H ++IKENTE+IKVNKT
Sbjct: 19 EDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKT 78
Query: 314 LPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKL 493
LPYLVSNV+ELLD++ EEE GA VDLD+Q K KCAVIKTSTR TYFLPV+GLVD ++L
Sbjct: 79 LPYLVSNVVELLDLEDNTEEE-GANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVDPDEL 136
Query: 494 KPGDLVGVNKDSYLILETLPAEYDARVKAMEVDE 595
KPGDLVGVNKDSYLILE LPAEYD+RVKAMEVDE
Sbjct: 137 KPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDE 170
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +2
Query: 32 WVQELLNLKDYYEKTNHNITMATTLEDKSIWE-DGEEALSEEVLRMPTDEIVSRTRLLDN 208
W ++Y EK NH + A++ D I + E+ EE L E R
Sbjct: 508 WKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASE 567
Query: 209 EIKIMKSEVMRISHELQAQNDKIKENTEKI 298
+++MK E+ S Q +KE + +
Sbjct: 568 SVRVMKREMTEASITSDRQIQSLKEKVDSL 597
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +2
Query: 32 WVQELLNLKDYYEKTNHNITMATTLEDKSIWE-DGEEALSEEVLRMPTDEIVSRTRLLDN 208
W ++Y EK NH + A++ D I + E+ EE L E R
Sbjct: 508 WKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASE 567
Query: 209 EIKIMKSEVMRISHELQAQNDKIKENTEKI 298
+++MK E+ S Q +KE + +
Sbjct: 568 SVRVMKREMTEASITSDRQIQSLKEKVDSL 597
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 35.1 bits (77), Expect = 0.038
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 338 IELLDVDPQEEEEDGAVV-DLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVG 514
+ LL + E G+ V ++ K ++K Y + V VD L G V
Sbjct: 61 VRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVA 120
Query: 515 VNKDSYLILETLPAEYDARVKAMEVDE 595
+ D+Y I E LP++ D V M V++
Sbjct: 121 LRADNYAIHEVLPSKVDPLVSLMMVEK 147
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 35.1 bits (77), Expect = 0.038
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 338 IELLDVDPQEEEEDGAVV-DLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVG 514
+ LL + E G+ V ++ K ++K Y + V VD L G V
Sbjct: 82 VRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVA 141
Query: 515 VNKDSYLILETLPAEYDARVKAMEVDE 595
+ D+Y I E LP++ D V M V++
Sbjct: 142 LRADNYAIHEVLPSKVDPLVSLMMVEK 168
>U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop helix
protein 25 protein.
Length = 313
Score = 33.1 bits (72), Expect = 0.15
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 56 KDYYEKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSE 232
K E+ NIT E K+I + EE +S+EV+ ++V+ L N SE
Sbjct: 67 KSASERKRRNITNELINECKTIVQKSEEEHISQEVVLFRIVKLVTGVNLESNFSSNDLSE 126
Query: 233 VMRISHELQAQNDKIKENTEKIKVNK 310
R + +++ K+K EKI+ K
Sbjct: 127 STRRKFDTESERRKVKTEREKIRRKK 152
>U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop helix
protein 27 protein.
Length = 321
Score = 32.7 bits (71), Expect = 0.20
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 68 EKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRI 244
E+ NIT E K+I + EE +S+EV+ ++V+ L N SE R
Sbjct: 79 ERKRRNITNELINECKTIVQKSEEEHISQEVVLFRIVKLVTGVNLESNFSSNDLSESTRR 138
Query: 245 SHELQAQNDKIKENTEKIKVNK 310
+ +++ K+K EKI+ K
Sbjct: 139 KFDTESERRKVKTEREKIRRKK 160
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 32.3 bits (70), Expect = 0.27
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +2
Query: 68 EKTNHNITMATTLEDKSIWEDG--EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMR 241
E N+ T+A ++ I +EAL+++ + P DEIV+ + E+K +++
Sbjct: 487 EDRNYESTIAQLKDEIQILNKRLEDEALAQQQQK-PKDEIVAESEKKLKELKERNKQLVM 545
Query: 242 ISHELQAQNDKIKENTEKIKVNK 310
E+Q + D I ++ +++ V K
Sbjct: 546 EKSEIQRELDNINDHLDQVLVEK 568
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 31.9 bits (69), Expect = 0.36
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +2
Query: 56 KDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEV 235
+DY EK N ++D+ W+D +E+ + TD R+ E K +++
Sbjct: 1201 RDYDEKINSLYGQNQKIKDE--WDDFRNDADKEIQKWKTDAYTVRS-----EAKALETTN 1253
Query: 236 MRISHELQAQNDKIKENTEKI 298
+ +LQA ND+I T+ +
Sbjct: 1254 TALKAQLQAANDRIDHLTKTV 1274
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 31.9 bits (69), Expect = 0.36
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +2
Query: 56 KDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEV 235
+DY EK N ++D+ W+D +E+ + TD R+ E K +++
Sbjct: 1274 RDYDEKINSLYGQNQKIKDE--WDDFRNDADKEIQKWKTDAYTVRS-----EAKALETTN 1326
Query: 236 MRISHELQAQNDKIKENTEKI 298
+ +LQA ND+I T+ +
Sbjct: 1327 TALKAQLQAANDRIDHLTKTV 1347
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 31.9 bits (69), Expect = 0.36
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +2
Query: 56 KDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEV 235
+DY EK N ++D+ W+D +E+ + TD R+ E K +++
Sbjct: 1274 RDYDEKINSLYGQNQKIKDE--WDDFRNDADKEIQKWKTDAYTVRS-----EAKALETTN 1326
Query: 236 MRISHELQAQNDKIKENTEKI 298
+ +LQA ND+I T+ +
Sbjct: 1327 TALKAQLQAANDRIDHLTKTV 1347
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 31.1 bits (67), Expect = 0.62
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = +2
Query: 41 ELLNLKDYYEKT-NHNITMATTLEDKSIWE-DGEEALSEEVLRMPTDEIVSRTRLLDNEI 214
E+LNL+ EK +H L + + E + + E +R+ EI +NE
Sbjct: 593 EILNLRKQLEKEISHTEDRNRLLHENTQKELEAHKETHTETVRVLEAEIDQFKSAFENEQ 652
Query: 215 KIMKSEVMRISHELQAQNDKIKENTEKIK-VNKTLPYLVSNVIELLD 352
+ K + +I EL+AQN + EK+K V + L S+ LL+
Sbjct: 653 EYGKEKSAKI-RELEAQNKTLLSEMEKVKHVAENLEAFTSDKDNLLE 698
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 31.1 bits (67), Expect = 0.62
Identities = 27/111 (24%), Positives = 50/111 (45%)
Frame = +2
Query: 89 TMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQN 268
T+ E+ +I ED E + EEV+ + T +++ + + +SE + + HE+
Sbjct: 6 TVIKNAEEIAIQED--EEIIEEVIEEEQVPWLGPTDVMEGQGEYYQSEEL-LEHEMVEYE 62
Query: 269 DKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKC 421
D + + + PY N+ +LL Q ++ G +V L S KC
Sbjct: 63 DA-EPYQSFLPIRDGAPYFSLNLPDLLSKAHQITQDTGVIVRLTSCFNKKC 112
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +2
Query: 128 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 307
D + L+ + +M DE++ RT++ I ++ + ++++ EL+ + KIKE+ E K
Sbjct: 1587 DHMDTLTIKAEQMSDDEVI-RTKVAVTAIDQLRKKWLKMNEELKKMHQKIKESIEFTKFV 1645
Query: 308 KT 313
T
Sbjct: 1646 ST 1647
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +2
Query: 140 ALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLP 319
AL E L++ T+ L +I+++KSE R+S ++Q ++ +N EK+ ++ L
Sbjct: 280 ALQSEKLKL-TEISQQEISGLKKKIEVLKSENHRLSSQIQQNTNEAAKNHEKLLEDRVLL 338
Query: 320 YLVSNVIELLDVDPQEEEE 376
+E+ D+ E +
Sbjct: 339 LETRYQLEVDDLKKSFESD 357
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Frame = +2
Query: 38 QELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSE------EVLRMPTDEIVSRTRL 199
++L L YE + N+T T + + DG + E + +R DE SR
Sbjct: 1103 EKLAQLSLQYESLSANLTNQNTTMEVKVNTDGSSSTVENLQSLLQFVRQSKDEATSRAMT 1162
Query: 200 LDNEIKIMKSEVMRISHELQAQNDKIKE-NTEKIKVNKTL 316
+ E++ +++E KI++ TEKI L
Sbjct: 1163 AEVEMRRLRAETAEYERGRNELLRKIRDLETEKIATTAAL 1202
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Frame = +2
Query: 38 QELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSE------EVLRMPTDEIVSRTRL 199
++L L YE + N+T T + + DG + E + +R DE SR
Sbjct: 1103 EKLAQLSLQYESLSANLTNQNTTMEVKVNTDGSSSTVENLQSLLQFVRQSKDEATSRAMT 1162
Query: 200 LDNEIKIMKSEVMRISHELQAQNDKIKE-NTEKIKVNKTL 316
+ E++ +++E KI++ TEKI L
Sbjct: 1163 AEVEMRRLRAETAEYERGRNELLRKIRDLETEKIATTAAL 1202
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 29.5 bits (63), Expect = 1.9
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Frame = +2
Query: 38 QELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSE------EVLRMPTDEIVSRTRL 199
++L L YE + N+T T + + DG + E + +R DE SR
Sbjct: 1103 EKLAQLSLQYESLSANLTNQNTTMEVKVNTDGSSSTVENLQSLLQFVRQSKDEATSRAMT 1162
Query: 200 LDNEIKIMKSEVMRISHELQAQNDKIKE-NTEKIKVNKTL 316
+ E++ +++E KI++ TEKI L
Sbjct: 1163 AEVEMRRLRAETAEYERGRNELLRKIRDLETEKIATTAAL 1202
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 292
+ E EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 292
+ E EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 128 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 292
+ E EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 491 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDE 595
++ G VGV+++ Y I LPA+ D V M+V+E
Sbjct: 136 IEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEE 170
>U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical
protein T16A1.8 protein.
Length = 368
Score = 29.1 bits (62), Expect = 2.5
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Frame = +2
Query: 107 EDKSIWEDGEEALSEEVLRMPTDEIV---SRTRLLDNEIKIMKSEVMRISHELQAQNDKI 277
+ KSI E L V ++ +EIV T +DN++ K+ + I H ++ N ++
Sbjct: 178 KSKSILIQNLEELQFNVSKVTLNEIVLVNCSTITIDNQVISDKNLNLFIKHWIKGSNCQL 237
Query: 278 KENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYF 457
K I+ + L ++ ++ E + +EE++ ++ K V+ + T F
Sbjct: 238 KSFEYHIRPTERLRFVEVSLFEGIGYMEKEEDDHWKRFEIKRNDGTKATVLLSKTDYISF 297
Query: 458 L 460
+
Sbjct: 298 V 298
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +2
Query: 320 YLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKP 499
+L++ E +DV +EEEED + ++ + + K K S + F P+I A +L+
Sbjct: 31 HLLAEDEEQIDVVHEEEEEDMEEMKMEIEMQSKSLHQKPSGLRRSFRPLI----ASELRS 86
Query: 500 GDLVGVNKDSYLILETLPAEYDA 568
G + + DS L P+ D+
Sbjct: 87 GGIHKTSSDSNLKRLAGPSSSDS 109
>AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical
protein Y60A3A.27 protein.
Length = 505
Score = 29.1 bits (62), Expect = 2.5
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = +2
Query: 38 QELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIK 217
QEL+NLK + TL + + G L+ L EI ++ R L+ K
Sbjct: 113 QELVNLKQGKSSVSEYAKNLRTLGEFAYQNTGTTVLATAFLNQCKPEIRNKLRGLEEIPK 172
Query: 218 IMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVD-PQE 367
+++ V R + + K ++ E+I LV+ + +L+DV PQ+
Sbjct: 173 TLETMVKRAERFHRRRQQKKEDKNEEIDDE----VLVAAMSKLMDVQKPQQ 219
>U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical
protein C23G10.6 protein.
Length = 540
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/61 (24%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 44 LLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSR-TRLLDNEIKI 220
+ +L D + HN+T + D++ ++++V+ + DEI+SR T ++D+ + +
Sbjct: 75 MAHLADTLTEAGHNVTFLIPVADETRKNQLGVKITKDVVLVEQDEIMSRDTLIVDDHMDM 134
Query: 221 M 223
M
Sbjct: 135 M 135
>AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical
protein Y54G2A.21 protein.
Length = 967
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 176 EIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 304
E + + ++L I+ +K+E IS E+Q QND +E+I++
Sbjct: 141 EQIPQIKMLRLTIERLKNEKNEISEEIQKQNDAFAVFSEEIQI 183
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 200 LDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 307
L IK +K E ++ EL A D+ + NT+K+K N
Sbjct: 837 LKKTIKELKFETLKKHEELGALRDEKEANTQKLKEN 872
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 200 LDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 307
L IK +K E ++ EL A D+ + NT+K+K N
Sbjct: 837 LKKTIKELKFETLKKHEELGALRDEKEANTQKLKEN 872
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +2
Query: 137 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTL 316
+ LS+E +E+ E K + M L +D + + + K KT
Sbjct: 1123 DLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTD 1179
Query: 317 PYLVSNVIELLDVDPQEEEEDGAVV 391
P L + E+LDV + + EDG ++
Sbjct: 1180 PELAEKINEMLDVILEYKNEDGELI 1204
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +2
Query: 137 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTL 316
+ LS+E +E+ E K + M L +D + + + K KT
Sbjct: 1123 DLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTD 1179
Query: 317 PYLVSNVIELLDVDPQEEEEDGAVV 391
P L + E+LDV + + EDG ++
Sbjct: 1180 PELAEKINEMLDVILEYKNEDGELI 1204
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/75 (20%), Positives = 40/75 (53%)
Frame = +2
Query: 41 ELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKI 220
++LN+KD+Y+++ + + +K + EE + ++ + +EIV+ +L + I
Sbjct: 24 QMLNVKDWYKQSKLVFMLIVAILEKDV---KEERNATKMAKNLNEEIVNELKLSEELIDC 80
Query: 221 MKSEVMRISHELQAQ 265
++ ++ EL+ +
Sbjct: 81 LEKQLQESKIELKEE 95
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +2
Query: 137 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTL 316
+ LS+E +E+ E K + M L +D + + + K KT
Sbjct: 1123 DLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTD 1179
Query: 317 PYLVSNVIELLDVDPQEEEEDGAVV 391
P L + E+LDV + + EDG ++
Sbjct: 1180 PELAEKINEMLDVILEYKNEDGELI 1204
>AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical
protein F33D4.6b protein.
Length = 648
Score = 28.3 bits (60), Expect = 4.4
Identities = 25/130 (19%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Frame = +2
Query: 35 VQELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPT-DEIVSRTRLLDNE 211
+++ +L D KT +++ E+ + DG + + E R T + V +++
Sbjct: 420 IRKFPDLYDEQWKTQVAPSVSPPSEEFAEQFDGVDEVQESPKRQETTQQEVQNDTPMNDA 479
Query: 212 IKIMKSEVMRISHELQAQ--NDKIKENTEK-IKVNKTLPYLVSNVIELLDVDPQEEEEDG 382
I+ S+V ++ E + + N ++++ K I+++K + E P+EEEE+
Sbjct: 480 IEQRSSKVQMLTKEQEEELLNKEVRKRVMKRIRLSKMKTTTTTTTTEAPTTTPEEEEEEV 539
Query: 383 AVVDLDSQRK 412
++ + +
Sbjct: 540 VTAAVEQEEE 549
>U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform b protein.
Length = 413
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +2
Query: 65 YEKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMR 241
Y H + A K++W + L E +P + T + NE +++ S
Sbjct: 228 YTVIEHGLFTAQMPYHKNVWFLSDRTCLVSEFENLPQEIKKHLTPKVINEQQLLASFTEM 287
Query: 242 ISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 379
+ HE+ ++K ++ ++ KTL L + +D D E D
Sbjct: 288 LIHEVADPLRRLKPDSVEVATVKTLMLLKPTCLREIDGDYLSTETD 333
>U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform a protein.
Length = 429
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +2
Query: 65 YEKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMR 241
Y H + A K++W + L E +P + T + NE +++ S
Sbjct: 244 YTVIEHGLFTAQMPYHKNVWFLSDRTCLVSEFENLPQEIKKHLTPKVINEQQLLASFTEM 303
Query: 242 ISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 379
+ HE+ ++K ++ ++ KTL L + +D D E D
Sbjct: 304 LIHEVADPLRRLKPDSVEVATVKTLMLLKPTCLREIDGDYLSTETD 349
>AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear receptor
NHR-105 protein.
Length = 429
Score = 27.9 bits (59), Expect = 5.8
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +2
Query: 65 YEKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMR 241
Y H + A K++W + L E +P + T + NE +++ S
Sbjct: 244 YTVIEHGLFTAQMPYHKNVWFLSDRTCLVSEFENLPQEIKKHLTPKVINEQQLLASFTEM 303
Query: 242 ISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 379
+ HE+ ++K ++ ++ KTL L + +D D E D
Sbjct: 304 LIHEVADPLRRLKPDSVEVATVKTLMLLKPTCLREIDGDYLSTETD 349
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +2
Query: 107 EDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKEN 286
++K E+ E+ + E E R + ++K + + +++ + +K+K
Sbjct: 888 KEKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVEKEKVKAE 947
Query: 287 TEKIKVNK 310
EK+KV K
Sbjct: 948 EEKVKVEK 955
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +2
Query: 170 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 334
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 549 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 608
Query: 335 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 448
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 609 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 647
>L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null
protein 1 protein.
Length = 1010
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 215 KIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 313
+I+++E M++ HE+ + N + + EKI + KT
Sbjct: 820 RIVENEKMKVQHEIDSLNSTNQLSAEKIDMLKT 852
>L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical
protein F10E9.2 protein.
Length = 286
Score = 27.5 bits (58), Expect = 7.7
Identities = 29/100 (29%), Positives = 43/100 (43%)
Frame = +2
Query: 80 HNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQ 259
H IT+ T KS E+GE S P + S+TRL D +KI + +++ + + Q
Sbjct: 191 HMITLRT---QKSSSEEGEGEFSGRGDPAPLEVGDSKTRLSD--LKITRHKMLLLDVDDQ 245
Query: 260 AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 379
++ +E EK K NV L P ED
Sbjct: 246 KKDGSGEEKKEKKSAEKEKKISHENVQSL---SPSSRAED 282
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +2
Query: 170 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 334
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 549 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 608
Query: 335 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 448
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 609 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 647
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +2
Query: 170 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 334
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 547 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 606
Query: 335 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 448
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 607 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 645
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,357,860
Number of Sequences: 27780
Number of extensions: 211009
Number of successful extensions: 865
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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