Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j10f
(597 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 215 2e-56
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 210 7e-55
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 42 4e-04
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 37 0.012
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 36 0.027
At2g12100.1 68415.m01300 Ulp1 protease family protein contains P... 34 0.083
At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast... 32 0.33
At4g27500.1 68417.m03950 expressed protein non-consensus GA dono... 32 0.33
At5g27500.1 68418.m03287 hypothetical protein hypothetical prote... 31 0.44
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 31 0.77
At2g05180.1 68415.m00545 cytochrome P450 family protein similar ... 31 0.77
At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic... 30 1.0
At3g24350.1 68416.m03057 syntaxin, putative (SYP32) similar to S... 30 1.0
At5g46410.1 68418.m05712 NLI interacting factor (NIF) family pro... 30 1.3
At4g08710.1 68417.m01439 hypothetical protein contains Pfam prof... 30 1.3
At2g44180.1 68415.m05496 methionyl aminopeptidase, putative / me... 30 1.3
At2g30500.1 68415.m03715 kinase interacting family protein simil... 30 1.3
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 30 1.3
At5g07220.1 68418.m00823 BAG domain-containing protein contains ... 29 2.4
At3g53540.1 68416.m05912 expressed protein 29 2.4
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 2.4
At5g58320.2 68418.m07301 kinase interacting protein-related low ... 29 3.1
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 29 3.1
At1g33960.1 68414.m04209 avirulence-responsive protein / avirule... 28 4.1
At1g28020.1 68414.m03431 pentatricopeptide (PPR) repeat-containi... 28 4.1
At5g06850.1 68418.m00774 C2 domain-containing protein contains I... 28 5.4
At3g20950.1 68416.m02648 cytochrome P450 family protein similar ... 28 5.4
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 28 5.4
At5g64330.1 68418.m08080 non-phototropic hypocotyl 3 (NPH3) iden... 27 7.2
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 27 7.2
At3g45580.1 68416.m04923 zinc finger (C3HC4-type RING finger) fa... 27 7.2
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 27 7.2
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 27 7.2
At5g47990.1 68418.m05929 cytochrome P450 family protein similar ... 27 9.5
At4g14760.1 68417.m02271 M protein repeat-containing protein con... 27 9.5
At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing ... 27 9.5
At3g20940.1 68416.m02647 cytochrome P450 family protein similar ... 27 9.5
At3g04830.2 68416.m00524 expressed protein 27 9.5
At3g04830.1 68416.m00523 expressed protein 27 9.5
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 215 bits (525), Expect = 2e-56
Identities = 100/158 (63%), Positives = 128/158 (81%), Gaps = 1/158 (0%)
Frame = +2
Query: 125 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 304
ED +++ M T++I TRLLDNEI+I+K + R + E + +KIKEN EKIK+
Sbjct: 7 EDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKL 66
Query: 305 NKTLPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVD 481
NK LPYLV N++E+L+++P+++ EEDGA +DLDSQRKGKC V+KTSTRQT FLPV+GLVD
Sbjct: 67 NKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVD 126
Query: 482 AEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDE 595
+ LKPGDLVGVNKDSYLIL+TLP+EYD+RVKAMEVDE
Sbjct: 127 PDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDE 164
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 210 bits (512), Expect = 7e-55
Identities = 98/150 (65%), Positives = 126/150 (84%), Gaps = 1/150 (0%)
Frame = +2
Query: 149 EEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLV 328
+++ M TD+I +RLL NEI+I+K E R + +L++ +KIKEN EKIK+NK LPYLV
Sbjct: 14 DQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQEKIKLNKQLPYLV 73
Query: 329 SNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD 505
N++E+L++ P+++ EEDGA +DLDSQRKGKC V+KTSTRQT FLPV+GLVD + LKPGD
Sbjct: 74 GNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGD 133
Query: 506 LVGVNKDSYLILETLPAEYDARVKAMEVDE 595
LVGVNKDSYLIL+TLP+EYD+RVKAMEVDE
Sbjct: 134 LVGVNKDSYLILDTLPSEYDSRVKAMEVDE 163
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 41.5 bits (93), Expect = 4e-04
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +2
Query: 221 MKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLD 400
+K ++ HELQ Q + N +++ + +++ + +L + Q +E G+ V
Sbjct: 32 LKQYYLQHIHELQRQLRQKTNNLNRLEAQRNE---LNSRVRMLREELQLLQEPGSYVGEV 88
Query: 401 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVK 577
+ GK V +K Y + + +D K+ P V + DSY++ LP++ D V
Sbjct: 89 VKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN 148
Query: 578 AMEVDE 595
M+V++
Sbjct: 149 LMKVEK 154
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 36.7 bits (81), Expect = 0.012
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 338 IELLDVDPQEEEEDGAVVDLDSQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVG 514
+ +L + Q +E G+ V + GK V +K Y + + +D KL P V
Sbjct: 68 VRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVA 127
Query: 515 VNKDSYLILETLPAEYDARVKAMEVDE 595
+ DSY++ LP++ D V M+V++
Sbjct: 128 LRNDSYVLHLVLPSKVDPLVNLMKVEK 154
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 35.5 bits (78), Expect = 0.027
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 206 NEIKIMKSEVMRISHELQAQNDKIKENTEKI-KVNKTLPYLVSNVIELLDVDPQEEEEDG 382
NE++I+K E + EL+ + DK+ E + K K L LV + + ++D E+E G
Sbjct: 267 NEMEIVKIEQKGVIEELERKLDKLNETVRSLTKEEKVLRDLVIGLEK--NLDESMEKESG 324
Query: 383 AVVDLDSQRKGKCAVIKTS 439
+V++D+ GK IK S
Sbjct: 325 MMVEIDA--LGKERTIKES 341
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/71 (26%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Frame = +2
Query: 110 DKSIWEDGE--EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 283
DK++ E+ E L EVL+ ++++V++T ++KI + + ++L++Q++ +K
Sbjct: 445 DKALDEEKRNGEDLKAEVLK--SEKMVAKTLEELEKVKIERKSLFSAKNDLESQSESLK- 501
Query: 284 NTEKIKVNKTL 316
+E +K+ K L
Sbjct: 502 -SENVKLEKEL 511
>At2g12100.1 68415.m01300 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28270, At2g05450,
At1g45090, At2g16180, At2g06750
Length = 1224
Score = 33.9 bits (74), Expect = 0.083
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 113 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL-QAQNDKIKENT 289
++I +GEEAL E+ DE + T L + + S + +S L Q ++D + EN
Sbjct: 775 ETICGEGEEALKEDKSPTVVDEALEDTALPEANLSDPSSPTVVVSKVLTQLKDDILAENV 834
Query: 290 EKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTY 454
KI +P V+ L D EE+ V + I STR+ Y
Sbjct: 835 SKIPEKVAVP---EEVLTQLKDDVLEEKVSEKVAIPEEVSILSRVPINISTRRAY 886
>At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast /
transaminase A (ASP3) (YLS4) identical to SP|P46644
Aspartate aminotransferase, chloroplast precursor (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana};
identical to cDNA YLS4 mRNA for aspartate
aminotransferase (ASP3), partial cds GI:13122285
Length = 449
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 374 EDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVN 520
E+G + L+ RK + +I TR +LP++GLV+ KL ++G +
Sbjct: 86 EEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGAD 134
>At4g27500.1 68417.m03950 expressed protein non-consensus GA donor
splice site at exon 6
Length = 612
Score = 31.9 bits (69), Expect = 0.33
Identities = 21/92 (22%), Positives = 45/92 (48%)
Frame = +2
Query: 134 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 313
++ ++ +R E + + + ++K+M + + + E QA + +I E +EK+K K
Sbjct: 218 DKVIANAAMRAKIKESMGQKDDIQGQVKLMGAGLDGVKKERQAISARINELSEKLKATKD 277
Query: 314 LPYLVSNVIELLDVDPQEEEEDGAVVDLDSQR 409
++ N EL V + ++ + DL QR
Sbjct: 278 EITVLEN--ELKTVSEKRDKAYSNIHDLRRQR 307
>At5g27500.1 68418.m03287 hypothetical protein hypothetical proteins
- Arabidopsis thaliana
Length = 187
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 110 DKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENT 289
D S W++ ++ + + V ++++ ++ NEI +SEV I +EL A ++KE+
Sbjct: 47 DPSSWKNKKDWVEDAVYE-EVEDVLPNLGIMANEIVKARSEVNEIVNELSASIQELKEDA 105
Query: 290 --EKIKVNK 310
K+++ K
Sbjct: 106 MCSKMEIRK 114
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 30.7 bits (66), Expect = 0.77
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 350 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDA 484
D + +EEEE+ VV++ ++KGK + +ST F + A
Sbjct: 279 DEEEEEEEEEEVVVEVKKKKKGKAKIEHSSTAPPEFRRAVAKTSA 323
>At2g05180.1 68415.m00545 cytochrome P450 family protein similar to
Cytochrome P450 93A1 (SP:Q42798) {Glycine max}
Length = 442
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 38 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVLRMP 169
QE +K +Y EKT I + D WED +E E LR P
Sbjct: 384 QERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAP 429
>At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic
isozyme 1 / transaminase A (ASP2) identical to SP|P46645
Aspartate aminotransferase, cytoplasmic isozyme 1 (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana}
Length = 405
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 374 EDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILET 547
E+G + LD RK + ++ +R ++P++G+ D KL ++G DS I E+
Sbjct: 42 EEGKPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGA--DSPAITES 97
>At3g24350.1 68416.m03057 syntaxin, putative (SYP32) similar to
SP|Q9FFK1 Syntaxin 31 (AtSYP31) (AtSED5) {Arabidopsis
thaliana}, syntaxin 5A GB:NP_003155 from [Homo sapiens]
(J. Mol. Neurosci. (1997) 8 (2), 159-161)
Length = 347
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/88 (21%), Positives = 43/88 (48%)
Frame = +2
Query: 38 QELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIK 217
++L+N ++ ++ +H I +A + + + + A V PT EI T ++ EI
Sbjct: 50 EDLINKSEFNKRASH-IGLAINQTSQKLSKLAKLAKRTSVFDDPTQEIQELTVVIKQEIS 108
Query: 218 IMKSEVMRISHELQAQNDKIKENTEKIK 301
+ S ++ + +QND+ + ++ K
Sbjct: 109 ALNSALVDLQLFRSSQNDEGNNSRDRDK 136
>At5g46410.1 68418.m05712 NLI interacting factor (NIF) family
protein contains Pfam profile PF03031: NLI interacting
factor
Length = 453
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 260 AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQ 406
A D IK +T+KI ++ +L N +V+P + E D D Q
Sbjct: 206 ANKDDIKSDTDKINLDNHDLFLAFNRTRSYNVEPDDRAESEVAEDFDPQ 254
>At4g08710.1 68417.m01439 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 715
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 206 NEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 385
N+I IM S++ R L+A D+ K EK+ ++ + ++SN + + D +EE G
Sbjct: 577 NKIIIMISDLDRRVESLEAFKDEQKAKEEKVHIDNCV--ILSNTMITRNQDEMNQEEAGD 634
Query: 386 VVDLDSQ 406
+ D +
Sbjct: 635 SREKDQE 641
>At2g44180.1 68415.m05496 methionyl aminopeptidase, putative /
methionine aminopeptidase, putative / peptidase M,
putative similar to SP|P50579 Methionine aminopeptidase
2 (EC 3.4.11.18) (MetAP 2) {Homo sapiens}; contains Pfam
profile PF00557: metallopeptidase family M24
Length = 441
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Frame = +2
Query: 278 KENTEKIKVNKTLPYLVSNVIELLDV--------DPQEEEEDGAVVDLDS---QRKGKCA 424
KENTE N L S++ + LD+ D +EEEDG + + ++K K
Sbjct: 13 KENTEAESSNGNESQLSSDLTKSLDLAEVKEDEKDNNQEEEDGLKAEASTKKKKKKSKSK 72
Query: 425 VIKTSTRQT--YFLPVIGLVDAEKLKPGDLVGVNKDS 529
K+S +QT +PV+ L + G++ N D+
Sbjct: 73 KKKSSLQQTDPPSIPVLELFPSGDFPQGEIQQYNDDN 109
>At2g30500.1 68415.m03715 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 517
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/103 (20%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 125 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 304
EDG+EAL + + + ++ +LL + + + + H++ ++KE EK+++
Sbjct: 156 EDGDEALIRRMAELELELQETKQKLLLQQESVDGDNNVDLLHKITTYEGELKEANEKMRM 215
Query: 305 NK-TLPYLVSNVIELLDVDPQEE-EEDGAVVDLDSQRKGKCAV 427
++ + L + + + D ++ + VDLD + + AV
Sbjct: 216 HEDEIANLKNQLQSFMSFDTEDHLGAEQKSVDLDKEDTKEDAV 258
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = +2
Query: 233 VMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRK 412
V + +L+ K+K E +K++K + +EL+ P E ++ S +
Sbjct: 42 VQNVDFDLEKNEIKVKGKIEVVKIHKQIEKWSKKKVELISPKPSEVKKTTTTTTTTSVVE 101
Query: 413 GKCAVIKTSTRQTYFLPV 466
K IK +T L V
Sbjct: 102 KKTTEIKKDVIRTTVLKV 119
>At5g07220.1 68418.m00823 BAG domain-containing protein contains
Pfam:PF02179 BAG domain
Length = 303
Score = 29.1 bits (62), Expect = 2.4
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +2
Query: 137 EALSEEVLRMPTDEIVSRTRLLDNEIKIM-KSEVMRISHELQAQND-KIKENTEKIKVNK 310
E L ++LR+ D I++ D ++K+M K +V R+ ++A + K+K + +K++VNK
Sbjct: 176 EMLMNQLLRL--DAIIA-----DGDVKLMRKMQVQRVQKYVEALDLLKVKNSAKKVEVNK 228
Query: 311 TLPYLVSNVI-----ELLDVDPQEEEE 376
++ + +LL +EEEE
Sbjct: 229 SVRHKPQTQTRFEQRDLLSFVEEEEEE 255
>At3g53540.1 68416.m05912 expressed protein
Length = 924
Score = 29.1 bits (62), Expect = 2.4
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 65 YEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRI 244
+ ++HNI MATT + S++ED E+ S + T + R L D + + + ++
Sbjct: 789 FSDSDHNIVMATTPVEPSLFEDLEKKYSS----VKTSTRLERKLLFDQISREVLHMLKQL 844
Query: 245 SH-ELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 376
S ++ K+ + K+ +TL LV+ E EE+E
Sbjct: 845 SDPHPWVKSTKVCPKWDANKIQETLRDLVTRKDEKPSKYDVEEKE 889
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Frame = +2
Query: 47 LNL-KDYYEK-----TNHNITMATTLEDKSIWEDGEEALSEEVLRMPT---DEIVSRTRL 199
LN+ K YEK + N ++A LE+ E G+ ++ V+ +E R ++
Sbjct: 1464 LNMTKRKYEKEKDELSKQNQSLAKQLEEAK-EEAGKRTTTDAVVEQSVKEREEKEKRIQI 1522
Query: 200 LDNEIKIMKSEVMRISHELQAQNDKI-KENTEKIKVNK 310
LD + +K EV + + +L+ +++++ KE +E+ V K
Sbjct: 1523 LDKYVHQLKDEVRKKTEDLKKKDEELTKERSERKSVEK 1560
>At5g58320.2 68418.m07301 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 558
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 125 EDGEEALSE-EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIK 301
E+ E+ SE EVL + E L ++ ++SE+ R+ E++A++D+ E ++++
Sbjct: 447 EEEEKLKSEIEVLTLEKVEKGRCIETLSRKVSELESEISRLGSEIKARDDRTMEMEKEVE 506
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 173 DEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKI 298
DEI +++ L+ ++K + + R+S E++ Q +KE + I
Sbjct: 255 DEIEDKSKKLEYQVKEQEDIIQRLSMEIKDQKKLLKEQKDAI 296
>At1g33960.1 68414.m04209 avirulence-responsive protein / avirulence
induced gene (AIG1) identical to AIG1 (exhibits RPS2-
and avrRpt2-dependent induction early after infection
with Pseudomonas) SP:U40856 [Arabidopsis thaliana]
(Plant Cell 8 (2), 241-249 (1996))
Length = 353
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +2
Query: 35 VQELLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEI 214
V ELL L D K N+NI + I E+ E E+ + L E+
Sbjct: 220 VHELLKLIDLVRKQNNNIPYTDEMY-HMIKEENERHKKEQEELESKGHSEEQLAALMKEL 278
Query: 215 KIMKSEVMRISHELQAQNDKI-KENTEKI 298
+IM ++ E+ +N KI E EK+
Sbjct: 279 QIMNERNLKAMAEMMEKNMKIAMEAQEKL 307
>At1g28020.1 68414.m03431 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 612
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 491 LKPGDLVGVNKDSYLILETLPAEYDARVKAM 583
LK D+VG ++ Y + E+LP E+D R+ M
Sbjct: 326 LKVDDIVGA-EEIYKVWESLPLEFDHRIPTM 355
>At5g06850.1 68418.m00774 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 669
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 263 QNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 376
Q + ++ K+ V+ L YL NVIE DV+P + +
Sbjct: 74 QGEGVQSVRSKVYVSPKLWYLRVNVIEAQDVEPSDRSQ 111
>At3g20950.1 68416.m02648 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max];
Length = 526
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 38 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVL 160
QE LK +Y EKT + + + D +WED EE E +
Sbjct: 388 QERCELKGFYIPEKTLLVVNVYAIMRDPKLWEDPEEFKPERFI 430
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/72 (18%), Positives = 40/72 (55%)
Frame = +2
Query: 152 EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVS 331
EVL+ ++ S+ + + +++I+++++ + +L+ ++ E+++ ++S
Sbjct: 1042 EVLQKEVNDFQSKENVTEKQVEILETQMEELQDKLRDTTMDNEQLQEQLRGKDMELLIIS 1101
Query: 332 NVIELLDVDPQE 367
N +ELL + +E
Sbjct: 1102 NEMELLTSELEE 1113
>At5g64330.1 68418.m08080 non-phototropic hypocotyl 3 (NPH3)
identical to non-phototropic hypocotyl 3 [Arabidopsis
thaliana] gi|6224712|gb|AAF05914, PMID:10542152
Length = 746
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 212 IKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVV 391
++++ SE ++IS+ L N +KE+T + T ++ N L++ PQ +E A
Sbjct: 596 VQVLFSEQVKISNALA--NTSLKESTTLGEAMGTYQPMIPNRKTLIEATPQSFQEGWAAA 653
Query: 392 DLD-SQRKGKCAVIKT 436
D + K + +KT
Sbjct: 654 KKDINTLKFELETVKT 669
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +2
Query: 224 KSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELL-----DVDPQEEEEDGAV 388
+S S ++Q+ K K + +KV L N ++ + +PQEEEE+
Sbjct: 662 RSAAQSSSQPKESQSSK-KNKGKAVKVVDPKETLADNFMDTVRRLQSSQNPQEEEEEAIS 720
Query: 389 VDLDSQR--KGKCAVIKTSTRQT 451
D ++ R KGK V+ T + T
Sbjct: 721 KDKNTYRSDKGKSQVVGTDSSST 743
>At3g45580.1 68416.m04923 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature
Length = 408
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 368 EEEDGAVVDLDSQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILE 544
EEE V D + G+ + IK + + YF ++ E L + +KD L+ +
Sbjct: 2 EEESTLVRAEDPKHVGRVSSEIKPDSYRLYFKGLVSEETVELLAGFGVAICDKDDNLLFQ 61
Query: 545 TLPAEYDARVKAMEVD 592
+D+RV +EV+
Sbjct: 62 MKEQVHDSRVTVLEVE 77
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 27.5 bits (58), Expect = 7.2
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Frame = +2
Query: 107 EDKSIWEDGEEALS---EEVLRMPTD-EIVSRTRLLDNEIKIMKS---EVMRISHELQAQ 265
E+K+IW E+AL+ EE +R+ + +I S ++ + E K ++S E + ++ L+
Sbjct: 1010 EEKAIWSSKEKALTEAVEEKIRLYKNIQIESLSKEMSEEKKELESCRLECVTLADRLRCS 1069
Query: 266 NDKIKENTE-KIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVD-LDSQRKGKCAVIKTS 439
+ K++ E ++ + + L + V Q +E + +D L S+ + C + T
Sbjct: 1070 EENAKQDKESSLEKSLEIDRLGDELRSADAVSKQSQEVLKSDIDILKSEVQHACKMSDTF 1129
Query: 440 TRQ 448
R+
Sbjct: 1130 QRE 1132
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 113 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDN 208
K WE+ +SEEVL+ + E+V R RLLD+
Sbjct: 330 KKPWEEDAFTMSEEVLKNISLEVV-RERLLDH 360
>At5g47990.1 68418.m05929 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max];
Length = 511
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 38 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVL 160
+E +K +Y EKT + + + D WED EE E L
Sbjct: 384 KETCEIKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFL 426
>At4g14760.1 68417.m02271 M protein repeat-containing protein contains
Pfam profile: PF02370 M protein repeat
Length = 1676
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 218 IMKSEVMRISHELQAQNDKIKENTEKIK-VNKTLPYLVSNVIEL 346
I++++V +S + ND++ T KIK + +T+ +L S V EL
Sbjct: 1252 ILENKVNELSGVCENLNDEVVTKTTKIKQMKETVGFLESQVTEL 1295
>At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing
protein heterogeneous nuclear ribonucleoprotein R, Homo
sapiens, PIR:T02673; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 471
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 182 VSRTRLLDNEIKIMKSEVMRISHELQAQNDK---IKENTEKIKVNKT-LPYLVSNVIELL 349
+SRTR +E R+ +L ND ++E E +V + + + + E +
Sbjct: 1 MSRTRTAASEAHDSMESEERV--DLDGDNDPEEILEEEVEYEEVEEEEIEEIEEEIEEEV 58
Query: 350 DVDPQEEEEDGAVVDLDSQRK 412
+V+ +EEEED + + ++K
Sbjct: 59 EVEEEEEEEDAVATEEEEEKK 79
>At3g20940.1 68416.m02647 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max]; similar to cytochrome P450 (SP:H71417)
[Arabidopsis thaliana]
Length = 523
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 38 QELLNLKDYY--EKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDE 178
QE LK +Y EKT + + D + WED EE E + E
Sbjct: 385 QERCELKGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFIASSRSE 433
>At3g04830.2 68416.m00524 expressed protein
Length = 299
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 95 ATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRL 199
A LE K +WE+ E+A + + P D+++ + ++
Sbjct: 101 ALLLEAKGMWEEAEKAYTSLLEDNPLDQVIHKRKV 135
>At3g04830.1 68416.m00523 expressed protein
Length = 303
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 95 ATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRL 199
A LE K +WE+ E+A + + P D+++ + ++
Sbjct: 105 ALLLEAKGMWEEAEKAYTSLLEDNPLDQVIHKRKV 139
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,712,466
Number of Sequences: 28952
Number of extensions: 195074
Number of successful extensions: 747
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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