Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j08r
(762 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 25 0.66
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.0
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 23 3.5
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 22 4.6
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 22 4.6
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 22 4.6
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 22 4.6
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 22 4.6
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 22 6.1
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 22 6.1
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 25.0 bits (52), Expect = 0.66
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 499 WLYYYAVLVNNRKQADGIY*DSC 567
WLY A+ V++RK GI+ C
Sbjct: 12 WLYLTAIYVSSRKSDSGIWYWQC 34
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +2
Query: 371 TSSKLLLIIK*YFSCVLFYCCHSILMEFI 457
T+S + +I YF+C++F S+++ +
Sbjct: 266 TTSDAVPLIGTYFNCIMFMVASSVVLTVV 294
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.4 bits (48), Expect = 2.0
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +2
Query: 371 TSSKLLLIIK*YFSCVLFYCCHSILMEFI 457
T+S + +I YF+C++F S+++ +
Sbjct: 266 TTSDAVPLIGTYFNCIMFMVASSVVLTVV 294
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 22.6 bits (46), Expect = 3.5
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 494 PNGYIIMLY*LTIESRQMA--FIETVVSLSRVFFQNIESVNLYHISILSTNS 643
PN YI + E+ F+ + F++++ +LYHIS ++ +S
Sbjct: 301 PNYYIAHFINIDPENHNKTEIFLNITGDKTNSVFEHVKLGSLYHISFMACSS 352
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 280 ISKFLIALIWFSENQIVFCLLNNIIEMF 363
+ ++AL W EN I FC N + +F
Sbjct: 162 LKDMVMALKWVQENVIHFCGDPNNVTIF 189
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 280 ISKFLIALIWFSENQIVFCLLNNIIEMF 363
+ ++AL W EN I FC N + +F
Sbjct: 162 LKDMVLALKWVQENIIHFCGDPNNVTIF 189
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 280 ISKFLIALIWFSENQIVFCLLNNIIEMF 363
+ ++AL W EN I FC N + +F
Sbjct: 162 LKDMVMALKWVQENVIHFCGDPNNVTIF 189
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 280 ISKFLIALIWFSENQIVFCLLNNIIEMF 363
+ ++AL W EN I FC N + +F
Sbjct: 161 LKDMVMALKWVQENVIHFCGDPNNVTIF 188
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 90 ITITKEY*FSHMFILLIRYLECFRRVRLKPKQIKI 194
I + KE+ F +I + R E + L +QIKI
Sbjct: 169 IELEKEFTFVSKYITIKRKSELAENLGLSERQIKI 203
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 416 VLFYCCHSILMEFIFYWITVNQAM 487
V+ Y + + F FYW+ V AM
Sbjct: 314 VVIYTFNLFYLCFCFYWLLVMVAM 337
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 416 VLFYCCHSILMEFIFYWITVNQAM 487
V+ Y + + F FYW+ V AM
Sbjct: 270 VVIYTFNLFYLCFCFYWLLVMVAM 293
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,539
Number of Sequences: 336
Number of extensions: 2851
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -