Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j08f
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.2  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 287 VFFILVTIWF-LAATPNIRFFCEKATHDG 204
           V+ I+V  W+ + A+ NI F C++  ++G
Sbjct: 259 VYIIVVIFWYTVNASTNI-FLCDEICNEG 286


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 342 LNKRV*KFSSQKSFETKYSILHIGHHLVLGCHTQYSIL 229
           L + V  F+S   ++T     HIG  LVL  HT  ++L
Sbjct: 360 LGETVDLFNSLFGYQTLLITFHIGSQLVL--HTVKTVL 395


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 287 VFFILVTIWF-LAATPNIRFFCEKATHDG 204
           V+ I+V  W+ + A+ NI F C++  ++G
Sbjct: 259 VYIIVVIFWYTVNASTNI-FLCDEICNEG 286


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 349 ILFEQEGLKIFFPEVV 302
           ILF  EG++I  P+V+
Sbjct: 188 ILFSAEGVEIRIPDVI 203


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 268 PFGSWLPHPIFDSFVKKQHMMVSLEDCNHW 179
           P    +  PI+D       M+V L  CN +
Sbjct: 223 PLTPVVSEPIYDKKAMSDLMIVKLSHCNSY 252


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory
          receptor candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 33 EQILVIEYFFSEIRKFVYHN 92
          E+ LV+E F + ++ ++ HN
Sbjct: 2  EEKLVVEKFLNSLQIYLQHN 21


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory
          receptor candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 33 EQILVIEYFFSEIRKFVYHN 92
          E+ LV+E F + ++ ++ HN
Sbjct: 20 EEKLVVEKFLNSLQIYLQHN 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,944
Number of Sequences: 336
Number of extensions: 3232
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)