BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j08f
(613 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 153 8e-38
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 144 6e-35
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 137 6e-33
03_02_0546 - 9381989-9383733,9385838-9386054 135 3e-32
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 133 9e-32
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 129 1e-30
05_05_0109 - 22454539-22456268,22457069-22457279 129 2e-30
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 128 3e-30
03_02_0542 - 9348126-9349585,9352433-9352655 127 8e-30
11_08_0075 + 28173220-28173433,28175348-28177083 124 4e-29
08_01_0654 - 5639419-5641449 124 6e-29
03_02_0540 + 9340379-9340592,9341250-9342988 124 6e-29
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 124 7e-29
03_06_0484 + 34233042-34233258,34235317-34237049 122 3e-28
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 122 3e-28
05_04_0392 - 20889699-20891726 121 4e-28
11_01_0564 - 4447078-4448519,4449465-4449711 120 1e-27
05_04_0052 - 17515344-17517353 113 1e-25
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 107 9e-24
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 98 4e-21
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 94 9e-20
12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231 93 2e-19
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 82 4e-16
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 81 5e-16
12_02_0825 + 23476943-23476952,23477263-23477328,23477737-234778... 67 9e-12
03_02_0180 - 6211823-6213559 61 6e-10
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 56 3e-08
12_01_0346 + 2652181-2653566 55 5e-08
05_07_0320 + 29235266-29235305,29235409-29236682 46 2e-05
07_01_1104 - 10160493-10160599,10160632-10160637,10160930-101609... 33 0.24
12_02_0220 + 15833986-15834258 29 2.2
09_02_0240 - 6157855-6157891,6158040-6158329 29 3.8
06_03_0227 - 18425790-18425890,18426046-18426114,18426296-18426533 28 6.7
06_03_0222 - 18378892-18378992,18379106-18379174,18379356-18379593 28 6.7
05_01_0089 + 589457-589506,589598-589741,589820-589903,590118-59... 28 6.7
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 153 bits (372), Expect = 8e-38
Identities = 71/153 (46%), Positives = 98/153 (64%)
Frame = +1
Query: 100 MSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNM 279
MSV+G D GNESC +AVA+ GI+ + N+ S R TP+ V F K R +G A N
Sbjct: 1 MSVVGFDLGNESCIVAVARQRGIDVVLNEESKRETPAIVCFGDKQRFIGTAGAASSTMNP 60
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAM 459
KN+V KRLLGRK+SDP +Q+++ FPF+V + DG + YL E+ VFTP Q+ AM
Sbjct: 61 KNSVSQIKRLLGRKYSDPELQRDIAAFPFRVSEGPDGFPLVHARYLGEERVFTPTQLMAM 120
Query: 460 LLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
+L+ LK +A + L T + DC I +P YFT+ +R
Sbjct: 121 VLSNLKGIAESNLNTAVVDCCIGIPVYFTDLQR 153
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 144 bits (348), Expect = 6e-35
Identities = 68/153 (44%), Positives = 94/153 (61%)
Frame = +1
Query: 100 MSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNM 279
MSV+G D GNES +AVA+ GI+ + N+ S R TP+ V F K R +G A N
Sbjct: 1 MSVVGFDVGNESGIVAVARQRGIDVVLNEESKRETPAVVCFGDKQRFIGTAGAASSTMNP 60
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAM 459
+N+V KRLLGR F+DP +Q++L FPF+V + DG + YL ED FTP Q+ AM
Sbjct: 61 RNSVSQIKRLLGRAFADPELQRDLASFPFRVSEGPDGFPLVHARYLGEDRAFTPTQLLAM 120
Query: 460 LLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
+L+ LK +A L + DC I +P+YFT+ +R
Sbjct: 121 VLSNLKGIAEGNLNAAVFDCCIGIPAYFTDLQR 153
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 137 bits (332), Expect = 6e-33
Identities = 70/153 (45%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMK 282
+VIGID G + V K G +E IAND R TPS VAF+ R++G AAKNQ N +
Sbjct: 34 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPE 93
Query: 283 NTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLN-EDNVFTPEQITAM 459
T+F KRL+GRKF D VQ+++K P+K+ + DG I+V + E+ VF+PE+++AM
Sbjct: 94 RTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNK-DGKPYIQVKIKDGENKVFSPEEVSAM 152
Query: 460 LLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
+L K+K+ A L +IND V++VP+YF +A+R
Sbjct: 153 ILGKMKETAEAYLGKKINDAVVTVPAYFNDAQR 185
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 135 bits (326), Expect = 3e-32
Identities = 71/168 (42%), Positives = 101/168 (60%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 288
IGID G + V + +E IAND R TPS VAF+ R++G AAKNQ+ N NT
Sbjct: 11 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT 70
Query: 289 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 468
VF KRL+GR+FSDP VQ ++K +PFKV I V Y E+ F+ E+I++M+LT
Sbjct: 71 VFDAKRLIGRRFSDPSVQADMKMWPFKVVPGPADKPMIVVTYKGEEKKFSAEEISSMVLT 130
Query: 469 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
K+K++A L T I + VI+VP+YF +++R V+R++
Sbjct: 131 KMKEIAEAFLSTTIKNAVITVPAYFNDSQRQATKDAGVISGLNVMRII 178
>11_01_0563 +
4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 133 bits (322), Expect = 9e-32
Identities = 71/168 (42%), Positives = 98/168 (58%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 288
IGID G +AV + E I ND R TPSCVAF+ +R +G AA+NQ N NT
Sbjct: 18 IGIDLGTTYSCVAVRRRYRSEAITNDQGNRITPSCVAFTAADRFVGDAAENQAALNPTNT 77
Query: 289 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 468
+F KRL+GR+FSD VQ+++K +PFKV D I V + ++ F PE+I+AM+L+
Sbjct: 78 IFEVKRLIGRRFSDKSVQEDIKLWPFKVIAGRDDRPTIVVRHEGKEKQFVPEEISAMVLS 137
Query: 469 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
KL+D A L + D VI+VP YF NA+R V+R++
Sbjct: 138 KLRDAAVAYLGEPVTDAVITVPVYFNNAQREATLDAATIAGLNVMRII 185
Score = 129 bits (312), Expect = 1e-30
Identities = 70/168 (41%), Positives = 96/168 (57%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 288
IGID G AV + E I ND R TPSCVAF+ +R +G AA+NQ N NT
Sbjct: 644 IGIDLGTTYSCAAVRRHNRSEVITNDQGNRITPSCVAFTADDRFVGDAAENQAALNPTNT 703
Query: 289 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 468
+F KRL+GR+FS VQ+++K +PFKV D I V + ++ F PE+I+AM+L+
Sbjct: 704 IFEAKRLIGRRFSSKSVQEDIKLWPFKVVAGPDDRPTIVVQHEGKEMQFVPEEISAMVLS 763
Query: 469 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
KL+D A L + D VI+VP YF NA+R V+R++
Sbjct: 764 KLRDAAVAYLGEPVTDAVITVPVYFNNAQREATLDAAAIAGLNVMRII 811
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 129 bits (312), Expect = 1e-30
Identities = 64/152 (42%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
Frame = +1
Query: 106 VIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKN 285
VIGID G + V + G ++ +AND R TPS VAF+ R++G AAKNQ N
Sbjct: 39 VIGIDLGTTYSCVGVYRNGHVDIVANDQGNRITPSWVAFTDDERLVGEAAKNQAALNPDR 98
Query: 286 TVFGFKRLLGRKFSDPLVQKELKHFPFK-VEQRSDGGIGIRVNYLNEDNVFTPEQITAML 462
T+F KRL+GR+F D VQ+++K+ P+K V++ + +RV E VF+PE+I+AM+
Sbjct: 99 TIFDIKRLIGRRFDDEEVQRDVKYLPYKVVDKGGKPYVEVRVK-AGEVKVFSPEEISAMI 157
Query: 463 LTKLKDVAATALQTQINDCVISVPSYFTNAER 558
L K+K+ A + L ++ D V++VP+YF +A+R
Sbjct: 158 LAKMKETAESYLGQRVTDAVVTVPAYFNDAQR 189
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 129 bits (311), Expect = 2e-30
Identities = 67/168 (39%), Positives = 99/168 (58%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 288
IGID G + V + +E IAND R TPS VAF+ R++G AAKNQ+ N NT
Sbjct: 9 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT 68
Query: 289 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 468
VF KRL+GR+FSDP VQ ++K +PFKV I V Y E+ F E+I++M+L
Sbjct: 69 VFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGPGDKPMIVVQYKGEEKQFAAEEISSMVLI 128
Query: 469 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
K++++A L + I + V++VP+YF +++R V+R++
Sbjct: 129 KMREIAEAYLGSSIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRII 176
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 128 bits (310), Expect = 3e-30
Identities = 67/168 (39%), Positives = 100/168 (59%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 288
IGID G + V + +E IAND R TPS VAF+ R++G AAKNQ+ N NT
Sbjct: 202 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINT 261
Query: 289 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 468
VF KRL+GR+FSDP VQ ++K +PFKV I V Y E+ F+ E+I++M+L
Sbjct: 262 VFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSAEEISSMVLI 321
Query: 469 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
K++++A L + I + V++VP+YF +++R V+R++
Sbjct: 322 KMREIAEAYLGSNIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRII 369
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 127 bits (306), Expect = 8e-30
Identities = 68/168 (40%), Positives = 95/168 (56%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 288
+GID G +AV + G +E I ND TPSCVAF+ R++G AA NQ N NT
Sbjct: 13 VGIDLGTTYSCVAVWRRGRVEVIPNDQGNLTTPSCVAFTDTWRLIGDAALNQAAMNPLNT 72
Query: 289 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 468
+F KRL+GR+FSD VQ ++K +PFKV D I V Y E+ F+ E+I+AM+L
Sbjct: 73 IFDAKRLIGRRFSDVSVQGDIKLWPFKVTSGKDDRPMIVVQYRGEEKEFSAEEISAMVLF 132
Query: 469 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
K+K+ A L + VI+VP YF +++R VLR++
Sbjct: 133 KMKETAEAYLDKTVEKAVITVPVYFNDSQRQATMDAGAVAGLDVLRII 180
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 124 bits (300), Expect = 4e-29
Identities = 66/168 (39%), Positives = 97/168 (57%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 288
IGID G + V + +E IAND R TPS V F+ R++G AAKNQ+ N NT
Sbjct: 10 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINT 69
Query: 289 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 468
VF KRL+GR+FSD VQ ++K +PFKV I V Y E+ F E+I++M+L
Sbjct: 70 VFDAKRLIGRRFSDASVQSDIKLWPFKVIAGPGDKPMIVVQYKGEEKQFAAEEISSMVLI 129
Query: 469 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
K++++A L T I + V++VP+YF +++R V+R++
Sbjct: 130 KMREIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRII 177
>08_01_0654 - 5639419-5641449
Length = 676
Score = 124 bits (299), Expect = 6e-29
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKN-RILGVAAKNQMVTNM 279
+VIGID G + V + G +E IAND R TPS VAF+ R++G AAKNQ N
Sbjct: 45 TVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANP 104
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNED-NVFTPEQITA 456
+ T++ KRL+GR+FSD VQ+++K PF V R +G +RV + D VF+PE+++A
Sbjct: 105 ERTIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDR-NGKPHVRVEVKDGDVRVFSPEEVSA 163
Query: 457 MLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
M+LT++K+ A L ++ V++VP+YF +A+R
Sbjct: 164 MVLTRMKETAEAYLGEKVTRAVVTVPAYFNDAQR 197
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 124 bits (299), Expect = 6e-29
Identities = 66/168 (39%), Positives = 97/168 (57%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 288
IGID G + V + +E IAND R TPS VAF+ R++G AAKNQ+ N NT
Sbjct: 10 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINT 69
Query: 289 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 468
VF KRL+GR+FSD VQ + K +PFKV I V Y E+ F+ E+I++M+L
Sbjct: 70 VFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGPGDKPMIGVQYKGEEKQFSAEEISSMVLN 129
Query: 469 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
K+K+ A L + + + V++VP+YF +++R V+R++
Sbjct: 130 KMKETAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRII 177
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 124 bits (298), Expect = 7e-29
Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +1
Query: 82 SITMAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKN-RILGVAAK 258
S+ VIGID G + ++V + + I N R TPS VAF+QK R++G AK
Sbjct: 46 SVKPTGNEVIGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGERLVGTPAK 105
Query: 259 NQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFT 438
Q VTN +NT FG KRL+GR+F DP QKE+K P+K+ + +G + + ++
Sbjct: 106 RQAVTNPQNTFFGTKRLIGRRFEDPQTQKEMKMVPYKIVKAPNGDAWVET---TDGKQYS 162
Query: 439 PEQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
P QI A +LTK+K+ A + L ++ VI+VP+YF +A+R
Sbjct: 163 PSQIGAFVLTKMKETAESYLGKTVSKAVITVPAYFNDAQR 202
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 122 bits (293), Expect = 3e-28
Identities = 63/168 (37%), Positives = 98/168 (58%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNT 288
IGID G + V + +E IAND R TPS V F+ R++G AAKNQ+ N NT
Sbjct: 11 IGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINT 70
Query: 289 VFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLT 468
VF KRL+GR+FSD VQ ++K +P+KV I V Y E+ F+ E+I++M+L
Sbjct: 71 VFDAKRLIGRRFSDASVQSDIKMWPYKVIPGPGDKPMIVVQYKGEEKQFSAEEISSMVLI 130
Query: 469 KLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
K++++A L + + + V++VP+YF +++R V+R++
Sbjct: 131 KMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRII 178
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 122 bits (293), Expect = 3e-28
Identities = 63/152 (41%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
Frame = +1
Query: 106 VIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRIL-GVAAKNQMVTNMK 282
VIGID G + ++V + + I N R TPS VAF+QK +L G AK Q VTN +
Sbjct: 34 VIGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPQ 93
Query: 283 NTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAML 462
NT FG KRL+GR+F DP QKE+K P+K+ + +G + + ++P QI A +
Sbjct: 94 NTFFGTKRLIGRRFDDPQTQKEMKMVPYKIVKALNGDAWLET---TDGKQYSPSQIGAFV 150
Query: 463 LTKLKDVAATALQTQINDCVISVPSYFTNAER 558
LTK+K+ A + L ++ VI+VP+YF +A+R
Sbjct: 151 LTKMKETAESYLGKSVSKAVITVPAYFNDAQR 182
>05_04_0392 - 20889699-20891726
Length = 675
Score = 121 bits (292), Expect = 4e-28
Identities = 65/154 (42%), Positives = 98/154 (63%), Gaps = 2/154 (1%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKN-RILGVAAKNQMVTNM 279
+VIGID G + V + +E IAND R TPS VAF+ R++G AAKNQ N
Sbjct: 45 TVIGIDLGTTYSCVGVYRNDRVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANP 104
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNED-NVFTPEQITA 456
+ T++ KRL+GR+FSD VQ+++K PF V R +G +RV + D VF+PE+++A
Sbjct: 105 ERTIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDR-NGKPHVRVEVKDGDVRVFSPEEVSA 163
Query: 457 MLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
M+LT++K+ A L ++ V++VP+YF +A+R
Sbjct: 164 MVLTRMKETAEAYLGEKVTRAVVTVPAYFNDAQR 197
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 120 bits (288), Expect = 1e-27
Identities = 67/170 (39%), Positives = 96/170 (56%), Gaps = 2/170 (1%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFS--QKNRILGVAAKNQMVTNMK 282
+GID G +AV + E IAND R TPSCVAF+ + +G AA NQ N
Sbjct: 19 VGIDLGTTYSCVAVWRHDRGEVIANDQGNRLTPSCVAFTADDDDSFVGDAAFNQSALNPT 78
Query: 283 NTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAML 462
NT+F KRL+GR+FSD VQK++K +PFKV + I V + E+ F PE+I++M+
Sbjct: 79 NTIFEVKRLIGRRFSDDSVQKDIKLWPFKVVAGQEDRPMIVVRHEGEERQFMPEEISSMV 138
Query: 463 LTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
L K+++ A L + + VI+VP YF NA+R V+R++
Sbjct: 139 LAKMRETAEVYLGKTVTNAVITVPVYFNNAQRQATMDAGAIAGLNVMRII 188
>05_04_0052 - 17515344-17517353
Length = 669
Score = 113 bits (272), Expect = 1e-25
Identities = 61/154 (39%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKN-RILGVAAKNQMVTNM 279
+VIGID G + V + G +E IAND R TPS VAF+ R++G AAKNQ N
Sbjct: 40 TVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTGGGERLIGEAAKNQAAANP 99
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNED-NVFTPEQITA 456
TV+ KRL+GR+F+D VQ++++ PF V + G +RV D + +PE+++A
Sbjct: 100 GRTVYDAKRLIGRRFADAEVQRDMRLLPFAVVDKG-GKPHVRVEVRGGDVRLLSPEEVSA 158
Query: 457 MLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
M+L ++K+ A L ++ V++VP+YF +A+R
Sbjct: 159 MVLARMKETAEAYLGEEVTRAVVTVPAYFNDAQR 192
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 107 bits (256), Expect = 9e-24
Identities = 57/151 (37%), Positives = 85/151 (56%)
Frame = +1
Query: 106 VIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKN 285
VIGID G +AV + G E + N++ R TPS AF+ R++G AAK+Q N N
Sbjct: 11 VIGIDLGTACSCVAVWQNGRAEIVTNEHGGRATPSYAAFTDTERLVGDAAKSQASRNPTN 70
Query: 286 TVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLL 465
TVF KRL+GR+FSD VQ LK +PFKV + +Y + + E++ +MLL
Sbjct: 71 TVFATKRLMGRRFSDASVQDGLKLWPFKVVPGRGDKPMVAASYKGKQKLLAAEEVASMLL 130
Query: 466 TKLKDVAATALQTQINDCVISVPSYFTNAER 558
+K+K A + + + V++VP+ F +R
Sbjct: 131 SKMKAEAEAYIGGPVKNAVVTVPASFDVLQR 161
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 98.3 bits (234), Expect = 4e-21
Identities = 66/177 (37%), Positives = 91/177 (51%), Gaps = 6/177 (3%)
Frame = +1
Query: 100 MSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNM 279
MSV+G D GN++ A A+ GI+ + N S R +P+ VAFS R+LG A ++
Sbjct: 1 MSVVGFDVGNDTLVAAAARQRGIDVLLNAESNRESPAAVAFSHNARLLGPHAAGAASSHA 60
Query: 280 KNTVFGFKRLL---GRKFSDPLVQKELKHFPFKVEQRS-DGGIGI--RVNYLNEDNVFTP 441
+ KRLL GR P +L PF VE S DGG G+ V+++ +P
Sbjct: 61 PFS--SIKRLLLLAGRPTLLPRRGGDLSRLPFPVEASSADGGGGVLVHVDHIGRRIALSP 118
Query: 442 EQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
Q+ AMLL L+ +A L+ ++DCVISVP YFT A+R LRLM
Sbjct: 119 TQLLAMLLGYLRQLAEADLEAPVSDCVISVPCYFTQAQRQAYLDAAAVAGLRPLRLM 175
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 93.9 bits (223), Expect = 9e-20
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNR--ILGVAAKNQMVTN 276
+V+GID G +AV G +E I ND R TPS VAF+ ++G AAK Q V +
Sbjct: 35 AVLGIDIGATYSCVAVYCKGRVEIIPNDQGSRLTPSWVAFTDGGGRLVVGEAAKEQAVGS 94
Query: 277 MKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNED-NVFTPEQIT 453
V F RLLG+K D VQ+E+ P+ V +G + V + D V +PE+I
Sbjct: 95 PGRAVHDFMRLLGKKLGDDDVQREMTRLPYAVVDM-EGKPHVLVEAADGDVRVLSPEEIA 153
Query: 454 AMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
A +L K+K A L ++ V++VP YF +A+R V+R++
Sbjct: 154 AAVLAKMKKTAEAHLGRTVSSAVVAVPVYFNDAQRRAISDAGDIAGLDVMRIV 206
>12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231
Length = 270
Score = 93.1 bits (221), Expect = 2e-19
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 79 LSITMAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKN-RILGVAA 255
+++ +A V+GID G + +A + G I N R TPS VA+++ R++G A
Sbjct: 44 VAMRVACEKVVGIDLGTTNSAVAAMEGGKPTVITNAEGQRTTPSVVAYTKGGERLVGQIA 103
Query: 256 KNQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVF 435
K Q V N +NT F KR +GRK ++ V E K + V + +G + + + + F
Sbjct: 104 KRQAVVNPENTFFSVKRFIGRKMAE--VDDEAKQVSYHVVRDDNGNVKLDCPAIGKQ--F 159
Query: 436 TPEQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
E+I+A +L KL D A+ L +I V++VP+YF +++R VLR++
Sbjct: 160 AAEEISAQVLRKLVDDASKFLNDKITKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRII 218
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 81.8 bits (193), Expect = 4e-16
Identities = 41/104 (39%), Positives = 62/104 (59%)
Frame = +1
Query: 301 KRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLTKLKD 480
KRL+GR+FSD VQ+++K +PFKV D I V + ++ F PE+++AM+L+KL+D
Sbjct: 18 KRLIGRRFSDKSVQEDIKLWPFKVIAGPDDRPTIVVQHEGKEMQFVPEEVSAMVLSKLRD 77
Query: 481 VAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
A L + D VI+VP YF NA+R V+R++
Sbjct: 78 AAVAYLSEPVTDAVITVPVYFNNAQREATLDAAAIAGLNVMRII 121
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 81.4 bits (192), Expect = 5e-16
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
Frame = +1
Query: 160 GGIETIA-NDYSLRGTPSCVAFSQK-NRILGVAAKNQMVTNMKNTVFGFKRLLGRKFSDP 333
GG TI N R TPS VA+++ +R++G AK Q V N +NT F KR +GRK ++
Sbjct: 3 GGKPTIVTNAEGARTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMNE- 61
Query: 334 LVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLTKLKDVAATALQTQIN 513
V +E K ++V + +G + + + + F E+I+A +L KL D A+ L ++
Sbjct: 62 -VDEESKQVSYRVIRDDNGNVKLDCPAIGKQ--FAAEEISAQVLRKLVDDASKFLNDKVT 118
Query: 514 DCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
VI+VP+YF +++R VLR++
Sbjct: 119 KAVITVPAYFNDSQRTATKDAGRIAGLEVLRII 151
>12_02_0825 +
23476943-23476952,23477263-23477328,23477737-23477885,
23478148-23478212,23479247-23479710,23479724-23480208
Length = 412
Score = 67.3 bits (157), Expect = 9e-12
Identities = 34/104 (32%), Positives = 58/104 (55%)
Frame = +1
Query: 301 KRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLTKLKD 480
KRL+G++F+D VQ ++ +PFKV I V Y E+ F E+I++M+L K+++
Sbjct: 104 KRLIGQRFTDASVQSDIMLWPFKVIAGPGDKSMIVVQYKGEEKQFAAEEISSMVLIKMRE 163
Query: 481 VAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
+A L T I V++VP+YF ++R V+R++
Sbjct: 164 IAEAYLGTTIKKAVVTVPAYFNYSQRQATKDARVIAGLNVMRII 207
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
+N KRL+GR+F+D VQ ++K +PFKV I V Y E+ EQI
Sbjct: 21 RNMAENAKRLIGRRFTDASVQSDIKLWPFKVIAGPGDKSTIVVQYKGEEKQVAAEQI 77
>03_02_0180 - 6211823-6213559
Length = 578
Score = 61.3 bits (142), Expect = 6e-10
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVA-------AKNQM 267
IGID G +C +AV +E + N + +G S V F + GV +
Sbjct: 29 IGIDIGTSNCSVAVWTGHQVELLKNTRNQKGMRSYVMFKDDSLSAGVTGGATREHGHEER 88
Query: 268 VTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIR--VNYL--NEDNVF 435
+ +F KRL+GR +D +VQ K PF V+ GIG+R + L N
Sbjct: 89 DILSGSAIFNMKRLIGRMDTDEVVQAS-KSLPFLVQTL---GIGVRPFIAALVNNMWRST 144
Query: 436 TPEQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
TPE++ A+ L +LK + L+ + + V+++P F+ ++ VLRLM
Sbjct: 145 TPEEVLAIFLLELKALVEMHLKHPVRNAVLTIPVAFSRFQQTRIERACAMAGLHVLRLM 203
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 55.6 bits (128), Expect = 3e-08
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Frame = +1
Query: 94 AAMSVIGIDFGNESCYIA-VAKAGGIETIA---NDYSLRGTPSCVAFSQKNRILGVAAKN 261
A +V ID G+E +A V A G IA N+ S R +P+ A + NR+ G A
Sbjct: 28 AEAAVASIDLGSEWLKVAAVHLAPGRVPIAVAINEMSKRKSPALAALADGNRLAGEEASG 87
Query: 262 QMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTP 441
+ + LL + F E P+ + + G +R + + V+T
Sbjct: 88 ITARHPSKVFARARDLLAKPFPYVRSVAEALFLPYDLVPDARGAAAVRAD---DGQVYTV 144
Query: 442 EQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
E+I AM+L +A + + D V++VP YF AER
Sbjct: 145 EEIVAMVLHYAAGLADAHVGAPVRDAVVAVPPYFGQAER 183
>12_01_0346 + 2652181-2653566
Length = 461
Score = 54.8 bits (126), Expect = 5e-08
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 5/157 (3%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFS-QKNRILGVAAKNQMVTNM 279
+VI +D GN + +A G E A P+ VAF+ + ++G AAKN
Sbjct: 45 TVIAVDLGNTNSCVA---GYGDEADAPPLFRLCIPTSVAFTGDGDALVGEAAKNHPAA-- 99
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFK-VEQRSDGGIGIRVNYLNEDNVFTPEQITA 456
+ GFKRLLG +F P V++ +H P+K V+ + I + + +
Sbjct: 100 ---ISGFKRLLGTRFGSPEVRRAAEHLPYKIVDWCTMAHIEVNAGAGGAARSVYASDVAS 156
Query: 457 MLLTKLKDVAATALQ---TQINDCVISVPSYFTNAER 558
M++ +LK A L ++++ V++VP YF++ R
Sbjct: 157 MVIAELKARAEARLAGGGKKVHNAVVTVPYYFSDGPR 193
>05_07_0320 + 29235266-29235305,29235409-29236682
Length = 437
Score = 46.4 bits (105), Expect = 2e-05
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Frame = +1
Query: 205 PSCVAFSQKNRILGVAAKNQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRS 384
PS VAF+ L Q + + GFKRL+G + DP ++ + P+K+ ++
Sbjct: 78 PSWVAFTANATTLC----GQPAVDHSAAISGFKRLIGLQPGDPHAKRVAQIAPYKLGEKI 133
Query: 385 DGGIGIRVNYLNEDNV----FTPEQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNA 552
G I+V + F PE + +L+ LK A L +I++ V++VP +F
Sbjct: 134 -GRCSIQVQLDDGAKCRVEDFLPEDVAGILIAHLKSTAEAHLGHRIDNAVVTVPGHFNGN 192
Query: 553 ER 558
+R
Sbjct: 193 QR 194
>07_01_1104 -
10160493-10160599,10160632-10160637,10160930-10160975,
10161053-10161190,10161275-10161679,10163193-10163330,
10163401-10163482,10163596-10163943,10164294-10164655,
10165154-10165209,10166428-10166558,10166564-10166628,
10169191-10169631
Length = 774
Score = 32.7 bits (71), Expect = 0.24
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +1
Query: 178 ANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKH 357
A D GTP V +QKN G +Q + N+ T F LLG + V+KELKH
Sbjct: 181 AGDLLATGTPK-VHVNQKNT--GSVNASQDILNLDETGFWLVGLLGVTTNWFSVEKELKH 237
Query: 358 FPFKVEQRS 384
K E+ +
Sbjct: 238 IKEKAEKEA 246
>12_02_0220 + 15833986-15834258
Length = 90
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 483 CSNSFTDSNQRLCDICSQLFHEC*KKCSXECRWYCWS*CI 602
CS + TD C C Q ++ KC C YC S C+
Sbjct: 52 CSGACTDPASSSCTSCKQAYY---YKCMNYCGSYCRSNCV 88
>09_02_0240 - 6157855-6157891,6158040-6158329
Length = 108
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +3
Query: 483 CSNSFTDSNQRLCDICSQLFHEC*KKCSXECRWYCWS*CI 602
C N+ ++ C I Q +C ++ + +C+ YC++ C+
Sbjct: 50 CYNNAINTCSSNCSITPQYCDQCRRESNQQCQNYCYNGCL 89
>06_03_0227 - 18425790-18425890,18426046-18426114,18426296-18426533
Length = 135
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 414 PQ*RQCLYP*ADNSHVVDKTKRCCSNSFTDSNQRLCDICSQLFHEC*KKCSXECRWYC 587
P L+P A+ S VVD K C++S + L ++ + +C+ CR +C
Sbjct: 69 PYVHHTLHPEAEESEVVDFCKLGCASSVCSTMSTL--FANEEANHAVDRCNEACRRFC 124
>06_03_0222 - 18378892-18378992,18379106-18379174,18379356-18379593
Length = 135
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 414 PQ*RQCLYP*ADNSHVVDKTKRCCSNSFTDSNQRLCDICSQLFHEC*KKCSXECRWYC 587
P L+P A+ S VVD K C++S + L ++ + +C+ CR +C
Sbjct: 69 PYVHHTLHPEAEESEVVDFCKLGCASSVCSTMSTL--FANEEANHAVDRCNEACRRFC 124
>05_01_0089 +
589457-589506,589598-589741,589820-589903,590118-590261,
590351-590401,590492-590641,591175-591488,592685-592815,
593131-593451,594994-595057,595322-595443
Length = 524
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 168 YPTCFSHSNIAGFITKINSNDGHSSHCDRQIFLFH*KNTQLQVFAHKLSYFKNK 7
YP F + GF KI D H S C R+ T L+ +A+++ KN+
Sbjct: 266 YPLLFPYGE-DGFTNKILYRDNHGSKCKRKHL------TMLEYYAYRIQQRKNQ 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,461,428
Number of Sequences: 37544
Number of extensions: 319620
Number of successful extensions: 834
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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