Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j08f
(613 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 142 3e-34
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 132 2e-31
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 126 2e-29
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 6e-26
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 83 1e-16
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 41 7e-04
SB_16072| Best HMM Match : Ion_trans (HMM E-Value=0.32) 31 0.97
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_35208| Best HMM Match : EGF_CA (HMM E-Value=1.2e-09) 29 3.9
SB_27951| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_6908| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-32) 28 5.2
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_56913| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 27 9.1
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 142 bits (343), Expect = 3e-34
Identities = 71/174 (40%), Positives = 105/174 (60%)
Frame = +1
Query: 91 MAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMV 270
MA +GID G + V + G +E IAND R TPS VAFS R++G AAKNQ+
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 271 TNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
N +NTVF KRL+GRKF DP+V +++ H+PF V + + I+V + E F PE+I
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERP-KIQVEFKGEKKSFFPEEI 119
Query: 451 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
++M+LTK+K+ A L ++ D V++VP+YF +++R VLR++
Sbjct: 120 SSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRII 173
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 132 bits (320), Expect = 2e-31
Identities = 70/171 (40%), Positives = 103/171 (60%), Gaps = 1/171 (0%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKN-RILGVAAKNQMVTNM 279
+VIGID G + V K G +E IAND R TPS VAF+++ R++G AKNQ+ TN
Sbjct: 702 TVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAM 459
+NTVF KRL+GR + D VQ +LK FPFKV ++ ++V +E F E+I+AM
Sbjct: 762 ENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKP-HVQVKVKDEIKTFAAEEISAM 820
Query: 460 LLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
+LTK+K+ A L ++ V++VP+YF +A+R V+R++
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRII 871
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 130 bits (313), Expect = 1e-30
Identities = 59/116 (50%), Positives = 79/116 (68%)
Frame = +1
Query: 265 MVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPE 444
M++N+KNT+ FKR +GRKFSDP VQKE+ H P+KV + + IGI+V YL + VF+PE
Sbjct: 115 MISNLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPE 174
Query: 445 QITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
Q+ AML T+LK A AL+T++ DCVISVPSY+T+ +R LRLM
Sbjct: 175 QVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLM 230
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +1
Query: 100 MSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQ 264
MSV+G D GN+SCYIAVA+ GGIET+AN++S R TPS V+ K R++G + KNQ
Sbjct: 1 MSVVGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 126 bits (303), Expect = 2e-29
Identities = 65/174 (37%), Positives = 98/174 (56%)
Frame = +1
Query: 91 MAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMV 270
M IGID G + V + G +E IAND R TPS V F+ R++G AAKNQ+
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 271 TNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
N +NT+F KRL+GR++ D VQ ++K +PFK+ + I+V Y E F E+I
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIIS-DNNKPKIQVEYKGERKTFAAEEI 119
Query: 451 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
++M+L K+K+ A L ++ VI+VP+YF +++R VLR++
Sbjct: 120 SSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVI 173
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 114 bits (274), Expect = 6e-26
Identities = 66/180 (36%), Positives = 99/180 (55%), Gaps = 24/180 (13%)
Frame = +1
Query: 91 MAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMV 270
M IGID G + V + G +E IAND R TPS VAF+ + R++G AAKNQ+
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 271 TNMKNTVFGFKRLLGRKFSDPLVQKELKHFPF-----------KVEQRSD---------- 387
N NT+F KRL+GR+F DP V+ ++KH+ F KVE + +
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120
Query: 388 ---GGIGIRVNYLNEDNVFTPEQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
G ++V Y E F E+I++M+L K+K+ A L ++ D V++VP+YF +++R
Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQR 180
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Frame = +1
Query: 259 NQMVTN-MKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVF 435
+ MV N MK T + LG K +D +V + + D G +R
Sbjct: 145 SSMVLNKMKETAEAY---LGCKVTDAVVTVPAYFNDSQRQATKDAGESVRGVCWARSGQM 201
Query: 436 TPE------QITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXX 597
TP QI++M+L K+K+ A L ++ D V++VP+YF +++R
Sbjct: 202 TPRDRPLKMQISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLN 261
Query: 598 VLRLM 612
VLR++
Sbjct: 262 VLRII 266
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 83.4 bits (197), Expect = 1e-16
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Frame = +1
Query: 106 VIGIDFGNE-SCYIAV-AKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNM 279
+IGID G SC A A +G I+ +++ + PS VAF+ K ++G A +Q N
Sbjct: 33 IIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAEINP 92
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAM 459
KNT++ KR +G+ F+ + + K + F+V G G V V TPE+I
Sbjct: 93 KNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGY 152
Query: 460 LLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
++ KL+ +A L T + V+SVP+ F +R VLR++
Sbjct: 153 VIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVI 203
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 409 NYLNEDNVFTPEQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXX 588
NY D FTPE++ M+L + + I D V++VP +F AER
Sbjct: 72 NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLRAAELV 131
Query: 589 XXXVLRLM 612
VL++M
Sbjct: 132 GLNVLQIM 139
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 400 IRVNYLNEDNVFTPEQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
I V E F PEQI+A++L +LK A L + VI+VP++F +A+R
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQR 54
>SB_16072| Best HMM Match : Ion_trans (HMM E-Value=0.32)
Length = 293
Score = 30.7 bits (66), Expect = 0.97
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +1
Query: 292 FGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLTK 471
FG K++ +K SD +K + H F + +++ + + VN L + V PE+ T +L
Sbjct: 232 FGGKKVGSKKKSD--FEKVVDHLEFVRQAQAE--MQLSVNRLLQKEVKDPEEFTNSVLKS 287
Query: 472 LKDV 483
LKD+
Sbjct: 288 LKDI 291
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 189 VIIGYCLYPTCFSHSNIAGFITKINSNDGHSSHCDR 82
V++ C+ TC S+S IA + K N + SSH +R
Sbjct: 214 VVMIICMVITCVSYSAIAVLLHKYNQSTFSSSHPER 249
>SB_35208| Best HMM Match : EGF_CA (HMM E-Value=1.2e-09)
Length = 598
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 362 GKCFNSF*TRGSENFLPRSRLKPN 291
G CF + TRGSE+FL +R+ N
Sbjct: 374 GTCFPTLKTRGSESFLGEARIATN 397
>SB_27951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 323 NFLPRSRLKPNTVFFILVTIWFLAATPNIRFF 228
N L R RL P T ++L+ IW LA +I F
Sbjct: 130 NALRRWRLTPETCPYVLIAIWVLALAISIPDF 161
>SB_6908| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-32)
Length = 331
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 323 NFLPRSRLKPNTVFFILVTIWFLAATPNIRFF 228
N L R RL P T ++L+ IW LA +I F
Sbjct: 130 NALRRWRLTPETCPYVLIAIWVLALAISIPDF 161
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 483 CSNSFTDSN-QRLCDICSQLFHEC*KKCSXECRWY 584
CS+S+T N Q+ CD+C Q C + S C Y
Sbjct: 1255 CSDSWTRQNCQKSCDLCPQQQDAC-RDYSSRCAIY 1288
>SB_56913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1603
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = -2
Query: 297 TKYSILHIGHHLVLGCHTQYSILL*KSNT*WCPSKTVIIGYCLYPTCFSHSNIAGFITKI 118
+K I+ H VL CH ++I L W P + IG LY + + T +
Sbjct: 502 SKIDIIFAPVHKVLDCHVMFNIALSARMAEWSPDEK--IGDILYALFSKSMVLEAYSTYV 559
Query: 117 NS 112
N+
Sbjct: 560 NN 561
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 406 VNYLNEDNVFTPEQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
+ ++NE + TPEQI + + K+ ++ A + +ND S+ +TNA++
Sbjct: 227 IAFINELSKKTPEQIVDLTIMKITEM-VNATKKMVND---SIRHTYTNAKQ 273
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,353,633
Number of Sequences: 59808
Number of extensions: 390680
Number of successful extensions: 865
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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