Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j08f
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    29   0.16 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    28   0.27 
AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    24   3.4  
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        24   4.4  

>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +3

Query: 465 DKTKR---CCSNSFTDSNQRLCDICSQLFHEC*KKCSXEC 575
           DK KR   CC+++ T++ +++ +I  Q F E    C+ EC
Sbjct: 27  DKCKRKYKCCNDANTENMEKIHEIKKQCFMEMEVICAMEC 66


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 450 NSHVVDKTKRC--CSNSFTDSNQRLCDICSQLFHEC*KKCSXEC 575
           N+H   K  RC  C N FT S + +  I  +  HE   KC+ EC
Sbjct: 175 NTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCT-EC 217


>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 514 DCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
           D VI+VP+YF +++R             V+R++
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRII 33


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +3

Query: 480 CCSNSFTDSNQRLCDICSQLFHEC*KKCSXECR 578
           CC   +      + + CS  FH C   C  +C+
Sbjct: 58  CCGRGYRTQEVTVVERCSCTFHWC---CEVKCK 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,332
Number of Sequences: 2352
Number of extensions: 12265
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)