Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j08f
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 178 2e-45
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 150 7e-37
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 148 3e-36
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 137 7e-33
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 137 7e-33
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 135 3e-32
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 126 1e-29
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 126 1e-29
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 123 1e-28
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 119 1e-27
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 115 3e-26
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 84 9e-17
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 84 9e-17
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 68 6e-12
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 58 7e-09
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 28 6.0
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 178 bits (434), Expect = 2e-45
Identities = 81/155 (52%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
Frame = +1
Query: 100 MSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNM 279
MSV+G D GN +CYI VA+ GGIE I NDYSL TP+CV+F K+R +GVAA+ + TN+
Sbjct: 1 MSVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNI 60
Query: 280 KNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAM 459
KNTV FK L+GRKFSDP+ Q+ + P KV + + IG++V+YL E + FTPEQ+ A
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAA 120
Query: 460 LLTKLKDVAATALQ--TQINDCVISVPSYFTNAER 558
LLTKL+ + + L +++DCV++VPSYFT+ +R
Sbjct: 121 LLTKLRTIVESQLSDVKKVSDCVLAVPSYFTDVQR 155
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 150 bits (364), Expect = 7e-37
Identities = 73/174 (41%), Positives = 105/174 (60%)
Frame = +1
Query: 91 MAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMV 270
M+ + +GID G + V G +E IAND R TPS VAF+ R++G AAKNQ+
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 271 TNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
N NTVF KRL+GRKF DP VQ ++KH+PFKV ++V Y E+ +FTPE+I
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 451 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
++M+L K+K+ A L T + D V++VP+YF +++R VLR++
Sbjct: 121 SSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRII 174
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 148 bits (359), Expect = 3e-36
Identities = 72/174 (41%), Positives = 104/174 (59%)
Frame = +1
Query: 91 MAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMV 270
M+ + +GID G + V G +E IAND R TPS VAF+ R++G AAKNQ+
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 271 TNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
N NTVF KRL+GRKF DP VQ ++KH+PFKV ++V Y E+ +FTPE+I
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 451 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
++M+L K+K A L+ + D V++VP+YF +++R VLR++
Sbjct: 121 SSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLNVLRII 174
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 137 bits (331), Expect = 7e-33
Identities = 67/154 (43%), Positives = 105/154 (68%), Gaps = 2/154 (1%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFS--QKNRILGVAAKNQMVTN 276
++IGID G + V K G +E IAND R TPS VAFS Q +R++G AAKNQ+ N
Sbjct: 34 TIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTIN 93
Query: 277 MKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITA 456
+NT+F KRL+GR ++D VQ ++KH+PFKV +S+ + V +++ FTPE+++A
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKP-SVEVKVGSDNKQFTPEEVSA 152
Query: 457 MLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
M+L K+K++A + L ++ + V++VP+YF +A+R
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQR 186
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 137 bits (331), Expect = 7e-33
Identities = 67/154 (43%), Positives = 105/154 (68%), Gaps = 2/154 (1%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFS--QKNRILGVAAKNQMVTN 276
++IGID G + V K G +E IAND R TPS VAFS Q +R++G AAKNQ+ N
Sbjct: 34 TIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTIN 93
Query: 277 MKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITA 456
+NT+F KRL+GR ++D VQ ++KH+PFKV +S+ + V +++ FTPE+++A
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKP-SVEVKVGSDNKQFTPEEVSA 152
Query: 457 MLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
M+L K+K++A + L ++ + V++VP+YF +A+R
Sbjct: 153 MVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQR 186
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 135 bits (326), Expect = 3e-32
Identities = 66/154 (42%), Positives = 104/154 (67%), Gaps = 2/154 (1%)
Frame = +1
Query: 103 SVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFS--QKNRILGVAAKNQMVTN 276
++IGID G + V K G +E IAND R TPS VAFS Q R++G AAKNQ+ N
Sbjct: 31 TIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTIN 90
Query: 277 MKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITA 456
+NT+F KRL+GR +++ VQ+++KH+PFK+ +S+ + V +E FTPE+++A
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKP-NVEVKVGSETKQFTPEEVSA 149
Query: 457 MLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
M+LTK+K +A + L ++ + V++VP+YF +A++
Sbjct: 150 MVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQK 183
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 126 bits (304), Expect = 1e-29
Identities = 64/156 (41%), Positives = 95/156 (60%)
Frame = +1
Query: 91 MAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMV 270
M++ IGID G + + + G +E +AN + TPS VAF+ R++G AAK+Q
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 271 TNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
N +NTVF KRL+GR+F + VQ + KH+PF V+ + G I V E F PE+I
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGK-QGKPVIEVEVKGEKRQFNPEEI 119
Query: 451 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
+AM+L K+K+ A T L + D VI+VP+YF +++R
Sbjct: 120 SAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQR 155
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 126 bits (304), Expect = 1e-29
Identities = 64/156 (41%), Positives = 95/156 (60%)
Frame = +1
Query: 91 MAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMV 270
M++ IGID G + + + G +E +AN + TPS VAF+ R++G AAK+Q
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 271 TNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
N +NTVF KRL+GR+F + VQ + KH+PF V+ + G I V E F PE+I
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGK-QGKPVIEVEVKGEKRQFNPEEI 119
Query: 451 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
+AM+L K+K+ A T L + D VI+VP+YF +++R
Sbjct: 120 SAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQR 155
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 123 bits (296), Expect = 1e-28
Identities = 61/156 (39%), Positives = 93/156 (59%)
Frame = +1
Query: 91 MAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMV 270
M+ IGID G + + + G +E +AN + TPS VAF+ R++G AAK+Q
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 271 TNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
N +NTVF KRL+GR+F + VQ ++KH+PF V+ + G + V E F E+I
Sbjct: 61 RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGK-QGKPVVEVEVKGEKREFNAEEI 119
Query: 451 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
+AM+L K+K+ A L + D VI+VP+YF +++R
Sbjct: 120 SAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQR 155
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 119 bits (287), Expect = 1e-27
Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
Frame = +1
Query: 106 VIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKN-RILGVAAKNQMVTNMK 282
VIGID G + +++ + + I N +R TPS VAF+ R++G AK Q VTN
Sbjct: 33 VIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSA 92
Query: 283 NTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAML 462
NT+F KRL+GR++ DP VQK+LK P+K+ + S+G + + V++P Q+ A +
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVGAFV 148
Query: 463 LTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
L K+K+ A + L T +N+ V++VP+YF +++R VLR++
Sbjct: 149 LMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVI 198
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 115 bits (276), Expect = 3e-26
Identities = 61/170 (35%), Positives = 98/170 (57%), Gaps = 1/170 (0%)
Frame = +1
Query: 106 VIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKN-RILGVAAKNQMVTNMK 282
VIGID G + +++ + + I N +R TPS VAF+ R++G AK Q VTN
Sbjct: 33 VIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSA 92
Query: 283 NTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAML 462
NT+F KRL+GR++ DP VQK+LK P+K+ + S+G + + + P Q+ A +
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVGAFV 148
Query: 463 LTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
L K+K+ A + L T +N+ V++VP+YF +++R VLR++
Sbjct: 149 LMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISGLNVLRVI 198
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 83.8 bits (198), Expect = 9e-17
Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRIL-GVAAKNQMVTNMKN 285
IGID G +A + G + + N+ R TPS +A + +L G AK+ ++ N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKD-VIGKATN 61
Query: 286 TVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNV-FTPEQITAML 462
++F KR++GR++ D L+Q+++ +PFKVE + D GI + NE + F+ +++++
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVE-KDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 463 LTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
L LK A L ++ VI+VP+YF +R VLR++
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRIL 170
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 83.8 bits (198), Expect = 9e-17
Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +1
Query: 109 IGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRIL-GVAAKNQMVTNMKN 285
IGID G +A + G + + N+ R TPS +A + +L G AK+ ++ N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKD-VIGKATN 61
Query: 286 TVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNV-FTPEQITAML 462
++F KR++GR++ D L+Q+++ +PFKVE + D GI + NE + F+ +++++
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVE-KDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 463 LTKLKDVAATALQTQINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
L LK A L ++ VI+VP+YF +R VLR++
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRIL 170
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 67.7 bits (158), Expect = 6e-12
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Frame = +1
Query: 106 VIGIDFGNESCYIAVAKAGGIETIA--NDYSLRGTPSCVAFSQKNRIL-GVAAKNQMVTN 276
+ GID G I + A ETI +D + PS VAF +L G A Q N
Sbjct: 35 IAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHN 94
Query: 277 MKNTVFGFKRLLGRKF--SDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
K T++ KR +GR F ++ + K +PFK+ S+G + + PE+I
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 451 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
++++ LK AA L + VIS P+ F +R
Sbjct: 155 GSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNEKQR 190
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 57.6 bits (133), Expect = 7e-09
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 1/158 (0%)
Frame = +1
Query: 88 TMAAMSVIGIDFGNESCYIAVAKAG-GIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQ 264
T AA++ + ID G++ I + K G ++ + N S R TP+ ++F R AA
Sbjct: 6 TDAALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAM 65
Query: 265 MVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPE 444
++ +++ ++ RK D K FPF + + + V + ++ + E
Sbjct: 66 SSSHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDE--VRKTVVFPYKEEKYNVE 123
Query: 445 QITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
+ AM+L K V + D VI+VP + AER
Sbjct: 124 TLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAER 161
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Frame = +1
Query: 94 AAMSVIGIDFGNESCYIAVAKAG-GIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMV 270
AA++ + ID G++ I + K G ++ + N S R TP+ ++F R AA
Sbjct: 24 AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83
Query: 271 TNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
++ +++ ++ RK D K FPF + + + V + ++ + E +
Sbjct: 84 SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDE--VRKTVVFPYKEEKYNVETL 141
Query: 451 TAMLLTKLKDVAATALQTQINDCVISVPSYFTNAER 558
AM+L K V + D VI+VP + AER
Sbjct: 142 LAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAER 177
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 50.0 bits (114), Expect = 1e-06
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 4/175 (2%)
Frame = +1
Query: 100 MSVIGIDFGNESCYIAVAKAGGIETIA-NDYSLRGTPSCVAFSQKNRILGVAAKNQMVTN 276
++ + ID G + I + K G IA N S R TP+ V +R AA V
Sbjct: 24 LAAMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQV-R 82
Query: 277 MKNTVFG-FKRLLGRKFSDPLVQK-ELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQI 450
+ V G L+G+ P + + ++ F+V+ I E +T E +
Sbjct: 83 YPHLVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGES--YTVEAL 140
Query: 451 TAMLLTKLKDVAATALQT-QINDCVISVPSYFTNAERXXXXXXXXXXXXXVLRLM 612
TAM+L K Q +I D VI+VP YFT AER VL+L+
Sbjct: 141 TAMILANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQMAGLTVLQLI 195
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = +3
Query: 444 ADNSHVVDKTKRCCSNSFTDSNQRLCDICSQLFHEC*KKCSXECRWYCWS*CIA 605
+ NS K + C+N NQ+ ++ ++C CS + +S C++
Sbjct: 153 SSNSQCAPKCIQQCNNQCASQNQKTNQCANECNNQCANSCSPSSQTSSYSKCVS 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,985,420
Number of Sequences: 27780
Number of extensions: 305649
Number of successful extensions: 880
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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