Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j07r
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.47 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.6  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -3

Query: 70  KSRQLVKYLIIFIINILY 17
           K R+ + YL++F+IN+LY
Sbjct: 94  KIRKNLYYLLLFVINVLY 111


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 274 TLRFIYHRKSLFY 312
           T RF +H+K+L+Y
Sbjct: 169 TGRFTFHKKNLYY 181


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 582 KTTPLLFILIKHN*NLTILFDFI 650
           K  PLLF +   + N  +LF F+
Sbjct: 224 KVLPLLFSVSSSSYNCEVLFSFL 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,813
Number of Sequences: 336
Number of extensions: 2642
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)