Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j07f
(582 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24749| Best HMM Match : Adap_comp_sub (HMM E-Value=2.24208e-44) 255 2e-68
SB_19443| Best HMM Match : Adap_comp_sub (HMM E-Value=2.2e-20) 88 6e-18
SB_32450| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_36419| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_48498| Best HMM Match : DUF369 (HMM E-Value=2.4) 30 1.6
SB_41497| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_26838| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_43804| Best HMM Match : Abhydrolase_1 (HMM E-Value=3.5e-06) 29 3.7
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_31408| Best HMM Match : ENTH (HMM E-Value=0) 29 3.7
SB_53688| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0) 27 8.5
SB_17727| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12) 27 8.5
SB_4666| Best HMM Match : Exo_endo_phos (HMM E-Value=2.5) 27 8.5
SB_42923| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_23474| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12) 27 8.5
SB_13020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_24749| Best HMM Match : Adap_comp_sub (HMM E-Value=2.24208e-44)
Length = 331
Score = 255 bits (625), Expect = 2e-68
Identities = 113/145 (77%), Positives = 132/145 (91%)
Frame = +1
Query: 148 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKR 327
MIGG F+YNHKGEVLISRVYRDDIGRN VDAFRVNVIHAR Q+RSPVTNIARTSFFHI++
Sbjct: 1 MIGGFFIYNHKGEVLISRVYRDDIGRNTVDAFRVNVIHARGQIRSPVTNIARTSFFHIRQ 60
Query: 328 ANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 507
N+W+AAVT+QNVNAAMVFEFL + +D+M SYFGK++EE IKNNFVLIYELLDEI D+GY
Sbjct: 61 GNVWIAAVTRQNVNAAMVFEFLFRTVDIMMSYFGKVTEEGIKNNFVLIYELLDEIADYGY 120
Query: 508 PQNSDTGVLKTFITQQGIXSASKEE 582
PQ +DT +LKTFITQQG+ + ++EE
Sbjct: 121 PQKTDTAILKTFITQQGVKTQTREE 145
>SB_19443| Best HMM Match : Adap_comp_sub (HMM E-Value=2.2e-20)
Length = 216
Score = 87.8 bits (208), Expect = 6e-18
Identities = 35/73 (47%), Positives = 57/73 (78%)
Frame = +1
Query: 340 LAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNS 519
+ TK+N N A++F FL +++ V YF ++ EE+I++NFV+IYEL+DE++DFGYPQ +
Sbjct: 12 VVCTTKKNANVALIFVFLHRMVHVFIDYFKELEEESIRDNFVIIYELMDELVDFGYPQFT 71
Query: 520 DTGVLKTFITQQG 558
+T +L+ +ITQ+G
Sbjct: 72 ETKILQEYITQEG 84
>SB_32450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 570
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +1
Query: 400 IIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQ 555
+ ++ + Y G I+EE IK N LIYELLDE+LDFGY Q + T LK ++ Q
Sbjct: 18 VCNLCKDYCGIINEEAIKCNLPLIYELLDEVLDFGYVQATSTEALKAYVFNQ 69
>SB_36419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 451 KNNFVLIYELLDEILDFGYPQNSDTGVLKTFITQQGI 561
K V I +LL+E+LD G+P ++ VLK I I
Sbjct: 121 KKGAVYILQLLEEMLDNGFPLATEPNVLKELIRPPSI 157
>SB_48498| Best HMM Match : DUF369 (HMM E-Value=2.4)
Length = 734
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/68 (26%), Positives = 33/68 (48%)
Frame = +1
Query: 142 PTMIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHI 321
PT +G + ++ G +I+R+ + G + VI Q+++ VTN + FH
Sbjct: 225 PTHVGQVIHSSYGGSAIIARLKKSVHGSRFEGSVIAEVIEPFQELQDDVTNHPLSVSFHG 284
Query: 322 KRANIWLA 345
+ A + LA
Sbjct: 285 ENATLKLA 292
>SB_41497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 792
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -1
Query: 432 LAKIRLHHINDLQQEL-KYHGRVHILLCDCCQ 340
+A+I+ + I D Q++ KY G H+L+ DCC+
Sbjct: 732 IARIKRYAIQDRQKDRPKYTGFHHMLMYDCCR 763
>SB_26838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -1
Query: 432 LAKIRLHHINDLQQEL-KYHGRVHILLCDCCQ 340
+A+I+ + I D Q++ KY G H+L+ DCC+
Sbjct: 280 IARIKRYAIQDRQKDRPKYTGFHHMLMYDCCR 311
>SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 228 CCGRIQSECDPCSPAGAITCYQHCTHIFLPYQACKYLAG-SSH 353
CC R+ + C G I YQ H LP+ YLAG SH
Sbjct: 262 CCSRLNVQRYGCYTTGHINDYQQIFHYALPHGT--YLAGVESH 302
>SB_43804| Best HMM Match : Abhydrolase_1 (HMM E-Value=3.5e-06)
Length = 414
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = -1
Query: 561 DALLSDECLQDPSIRILRVTKVQDLIKQLIDQNKVILDVLFRNLAKIRLHHI 406
D S + L++P +L + +L+ +L+ N ++++ L + IRL+HI
Sbjct: 237 DLFRSADSLEEPVNSLLLNRHLANLLCKLVRDNTIMVEALKEDKPNIRLNHI 288
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 334 IWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENI-KNNFVLIYELLDEILDFGYP 510
+++ +T ++ N E L V+ Y + E I ++ F LI+ DEI+ GY
Sbjct: 535 LYMLLITTKHSNILEDLETLRLFSRVIPEYCRAMEESEIGEHAFELIFAF-DEIVALGYR 593
Query: 511 QNSDTGVLKTF 543
+N + ++TF
Sbjct: 594 ENVNLAQIRTF 604
>SB_31408| Best HMM Match : ENTH (HMM E-Value=0)
Length = 1080
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = -1
Query: 561 DALLSDECLQDPSIRILRVTKVQDLIKQLIDQNKVILDVLFRNLAKIRLHHI 406
D S + L++P +L + +L+ +L+ N ++++ L + IRL+HI
Sbjct: 237 DLFRSADSLEEPVNSLLLNRHLANLLCKLVRDNTIMVEALKEDKPNIRLNHI 288
>SB_53688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 279 SHLLASMDHIHSEC-VHSITTNIISVDSRDQHLAFMVVNEQASDHC 145
SH +DHI++ C + +T I++VD D F C
Sbjct: 97 SHTATLIDHIYTNCPISHVTPGILTVDISDHLPIFCTFKSHLKKTC 142
>SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 712
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 349 VTKQNVNAAMVFEFLLKIIDVMQSY--FGKISE-ENIKNNFVLIYELLDEILDFGYPQNS 519
VT + N V F+L++I + S+ G +S+ +NI + FV++ + + +L+ GY + S
Sbjct: 227 VTLEKTNIVFVTIFVLEMIINVISFGIMGYLSQLQNIFDGFVVVLSVTELLLENGYARLS 286
>SB_17727| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12)
Length = 648
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 279 SHLLASMDHIHSEC-VHSITTNIISVDSRDQHLAFMVVNEQASDHC 145
SH +DHI++ C + +T I++VD D F C
Sbjct: 268 SHTATLIDHIYTNCPISHVTPGILTVDISDHLPIFCTFKSHLKKTC 313
>SB_4666| Best HMM Match : Exo_endo_phos (HMM E-Value=2.5)
Length = 209
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 279 SHLLASMDHIHSEC-VHSITTNIISVDSRDQHLAFMVVNEQASDHC 145
SH +DHI++ C + +T I++VD D F C
Sbjct: 97 SHTATLIDHIYTNCPISHVTPGILTVDISDHLPIFCTFKSHLKKTC 142
>SB_42923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 279 SHLLASMDHIHSEC-VHSITTNIISVDSRDQHLAFMVVNEQASDHC 145
SH +DHI++ C + +T I++VD D F C
Sbjct: 97 SHTATLIDHIYTNCPISHVTPGILTVDISDHLPIFCTFKSHLKKTC 142
>SB_23474| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12)
Length = 623
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 279 SHLLASMDHIHSEC-VHSITTNIISVDSRDQHLAFMVVNEQASDHC 145
SH +DHI++ C + +T I++VD D F C
Sbjct: 470 SHTATLIDHIYTNCPISHVTPGILTVDISDHLPIFCTFKSHLKKTC 515
>SB_13020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 279 SHLLASMDHIHSEC-VHSITTNIISVDSRDQHLAFMVVNEQASDHC 145
SH +DHI++ C + +T I++VD D F C
Sbjct: 84 SHTATLIDHIYTNCPISHVTPGILTVDISDHLPIFCTFKSHLKKTC 129
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,122,511
Number of Sequences: 59808
Number of extensions: 378639
Number of successful extensions: 994
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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