Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11j05r
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 87   GGRSWLLIVDITKSRCRHWR 146
            GG  W L +D  K+RC   R
Sbjct: 1734 GGMIWALDLDDFKNRCGEGR 1753


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 420 AGKGSTVPSARLVSQSTLPS 361
           AG  S  PSA  +S S+LPS
Sbjct: 200 AGFRSPYPSALPISTSSLPS 219


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 420 AGKGSTVPSARLVSQSTLPS 361
           AG  S  PSA  +S S+LPS
Sbjct: 92  AGFRSPYPSALPISTSSLPS 111


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 250 FSFCYGFYSFK 218
           FSFCY +Y+ K
Sbjct: 270 FSFCYCYYNSK 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,026
Number of Sequences: 336
Number of extensions: 3413
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)