Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11j03r
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 202 1e-52
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 202 1e-52
07_03_1639 + 28305801-28305958,28306240-28306249 36 0.021
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 34 0.066
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 29 2.5
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 29 2.5
04_04_1687 - 35365766-35366356,35367137-35368135 29 3.3
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 29 3.3
01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416 29 3.3
02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 28 5.7
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 28 5.7
02_05_0067 + 25557975-25558553 27 7.5
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 27 7.5
02_02_0125 - 7026037-7027377 27 10.0
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 202 bits (494), Expect = 1e-52
Identities = 94/158 (59%), Positives = 115/158 (72%)
Frame = -2
Query: 550 VMRCVKKKVWLDPNEINEIANTNSXQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 371
V++C K KVWLDPNE+NEI+ NS QNIRK++KDG +IKKP +HSR+R R+ EA++KG
Sbjct: 14 VLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSRSRARRAHEAKQKG 73
Query: 370 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNVFK 191
RH G+GKRRGT AR+P K LW R AKKID+H+YH +YMK KGN+FK
Sbjct: 74 RHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNMFK 133
Query: 190 NKRVLMEYIHRKKAEKARTKMLSDQAEAXRNKVKEASQ 77
NKRVLME IH+ KAEKAR K LSDQ EA R K K + +
Sbjct: 134 NKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRE 171
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 202 bits (494), Expect = 1e-52
Identities = 94/158 (59%), Positives = 115/158 (72%)
Frame = -2
Query: 550 VMRCVKKKVWLDPNEINEIANTNSXQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKG 371
V++C K KVWLDPNE+NEI+ NS QNIRK++KDG +IKKP +HSR+R R+ EA++KG
Sbjct: 14 VLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSRSRARRAHEAKQKG 73
Query: 370 RHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXRTAKKIDRHLYHSLYMKAKGNVFK 191
RH G+GKRRGT AR+P K LW R AKKID+H+YH +YMK KGN+FK
Sbjct: 74 RHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNMFK 133
Query: 190 NKRVLMEYIHRKKAEKARTKMLSDQAEAXRNKVKEASQ 77
NKRVLME IH+ KAEKAR K LSDQ EA R K K + +
Sbjct: 134 NKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRE 171
>07_03_1639 + 28305801-28305958,28306240-28306249
Length = 55
Score = 35.9 bits (79), Expect = 0.021
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -2
Query: 217 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEA 107
MK KGN+ NKR + +AEKAR + LSDQ EA
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQFEA 37
>07_03_0435 +
18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 34.3 bits (75), Expect = 0.066
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 160 RKKAEKARTKMLSDQAEAXRNKVKEASQAPRGTYCRQEGGN 38
RKKAE+A K +++AEA R K +E A Y +++ N
Sbjct: 208 RKKAEEAEAKRKAEEAEARRKKEEEERDAELAAYYQEQWAN 248
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -2
Query: 535 KKKVWLDPNEINEIANTNSXQNIRKMI---KDGLVIKKPVAVHSRARVRKNTEARRKGRH 365
K W D E+N + + + KM+ D LV+ +A H + T RKGR
Sbjct: 761 KGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRNDEETTSISRKGRA 818
Query: 364 CGFG 353
GFG
Sbjct: 819 QGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -2
Query: 535 KKKVWLDPNEINEIANTNSXQNIRKMI---KDGLVIKKPVAVHSRARVRKNTEARRKGRH 365
K W D E+N + + + KM+ D LV+ +A H + T RKGR
Sbjct: 712 KGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRNDEETTSISRKGRA 769
Query: 364 CGFG 353
GFG
Sbjct: 770 QGFG 773
>04_04_1687 - 35365766-35366356,35367137-35368135
Length = 529
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 440 HQETCSSPLPRPCPQKHR 387
H E C +PLP P P HR
Sbjct: 53 HAEQCPAPLPDPLPSAHR 70
>03_02_0596 +
9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 493 ANTNSXQNIRKMIKD-GLVIK-KPVAVHSRARVRKNTEARRKGRHCGFGKRRGTAN 332
AN ++ + + ++ D GL+ + KP+ V S RVR + K GK R TAN
Sbjct: 201 ANNDNSEKLEELFLDKGLLDELKPIRVESGKRVRASIRIIEKMMSSRVGKIRNTAN 256
>01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416
Length = 302
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 448 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTA 335
G+ +K+ H + + R+GRH G+G+RR +A
Sbjct: 212 GITLKEDEKQHGTSSSAADGGGLRRGRHDGWGRRRSSA 249
>02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942
Length = 379
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 454 KDGLVIKKPVAVHSRARVRKNTEARRKGRHC---GFGKRRGTANAR 326
KDG ++ + +RA R +T+A R+ HC G+G RR + R
Sbjct: 174 KDGRNLQAGAQLCARAASRGHTDALRELGHCVSDGYGVRRSLSGGR 219
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 27.9 bits (59), Expect = 5.7
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = -2
Query: 256 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEAXRNKVKEASQ 77
AKK RH+ L + AK + R E + ++KAE+ R + D+ K+++ +
Sbjct: 166 AKKPPRHVRVMLEVLAKRKEAEELRKREEELRKRKAEEERLQREEDERMVEEMKMQQKER 225
Query: 76 APRGTYCRQEGG 41
T +++ G
Sbjct: 226 DKGKTMKKRQDG 237
>02_05_0067 + 25557975-25558553
Length = 192
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 181 HACS*THYPSPSCRVSGIDACQSSW 255
H C H P CR + +DA Q+ W
Sbjct: 148 HGCDKEHAYQPPCRPNVVDASQAVW 172
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -2
Query: 541 CVKKKVWLDPNEINEIANTNSXQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRK 374
C +V+ D + N +NIRK + ++++ P+A + NT RK
Sbjct: 118 CFAARVYCDGCHCSPCGNKIENENIRKEAIETILLRNPLAFQPKIENSPNTVTVRK 173
>02_02_0125 - 7026037-7027377
Length = 446
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +2
Query: 335 GSTSSLTKATVTTLSTCLCVFADTGAGVDCYRFLDDETILDHLTDVLXGVGVCDL 499
G +S++ +T T+ ST + G G+D R +D+ + L VG C++
Sbjct: 39 GLRASVSASTATS-STSMAQLVAAGGGIDELRLVDERAAVAALQQQQLPVGGCEV 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,077,197
Number of Sequences: 37544
Number of extensions: 323299
Number of successful extensions: 1023
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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