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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i24r
         (742 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151...   251   4e-67
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811...   251   5e-67
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182...   249   2e-66
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478...   248   3e-66
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386...   241   3e-64
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127...   138   6e-33
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164...   138   6e-33
07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207           28   6.8  
06_03_1221 - 28514952-28518152                                         28   6.8  
05_02_0101 + 6611694-6611834,6612651-6612734,6613035-6613096,661...    28   6.8  

>08_01_0179 +
           1519141-1519144,1519278-1519301,1519417-1519517,
           1519805-1519920,1519944-1520112,1520713-1520859,
           1520943-1521003,1521086-1521183,1521608-1521750,
           1521980-1522063,1522191-1522280,1522375-1522420
          Length = 360

 Score =  251 bits (615), Expect = 4e-67
 Identities = 121/175 (69%), Positives = 142/175 (81%)
 Frame = -3

Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
           LAPLAKVIHDNF I EGLM            VDGPS K WR GR A  NIIP+STGAAKA
Sbjct: 182 LAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKA 241

Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
           VGKV+P LNGKLTGM+FRVP  +VSVVDLTVR+ K ASY+AIK  +K A+EG LKGI+GY
Sbjct: 242 VGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGY 301

Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
            E+ +VS+DF+GDS SSIFDA AGI+LNDNFVKL++WYDNE+GYS+RVIDLI+++
Sbjct: 302 VEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHM 356


>04_04_0306 +
           24280773-24280776,24280906-24280929,24281023-24281123,
           24281359-24281502,24281667-24281782,24281869-24281968,
           24282068-24282214,24282329-24282389,24282480-24282577,
           24283118-24283260,24283374-24283457,24283538-24283627,
           24284018-24284063
          Length = 385

 Score =  251 bits (614), Expect = 5e-67
 Identities = 123/175 (70%), Positives = 141/175 (80%)
 Frame = -3

Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
           LAPLAKVI+D F I EGLM            VDGPS K WR GR A  NIIP+STGAAKA
Sbjct: 207 LAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKA 266

Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
           VGKV+PALNGKLTGMAFRVP  +VSVVDLTVRL KPASY+ IK  +KE +EG LKGILGY
Sbjct: 267 VGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGY 326

Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
            E+ +VS+DF GD+ SSIFDA AGI+LNDNFVKL+SWYDNE+GYSSRV+DLI+++
Sbjct: 327 VEEDLVSTDFQGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 381


>06_03_1052 -
           27217792-27217846,27218025-27218114,27218191-27218274,
           27218526-27218668,27218748-27218845,27218959-27219019,
           27219184-27219330,27219428-27219527,27219701-27219813,
           27220302-27220402,27220614-27220652,27220739-27220797,
           27221027-27221088,27221411-27221506
          Length = 415

 Score =  249 bits (610), Expect = 2e-66
 Identities = 120/175 (68%), Positives = 141/175 (80%)
 Frame = -3

Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
           LAPLAK++H+ F I EGLM            VDGPS K WR GRGA QNIIP+STGAAKA
Sbjct: 234 LAPLAKIVHEEFGIAEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKA 293

Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
           VGKV+PALNGKLTGMAFRVP  NVSVVDLT RL K ASYE +K  +KEA+EG LKGILGY
Sbjct: 294 VGKVLPALNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKEASEGSLKGILGY 353

Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
           T++ VVS+DFIGD+ SSIFDA AGI L+ +F+KL+SWYDNE+GYS+RV+DLI ++
Sbjct: 354 TDEDVVSNDFIGDTRSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIGHM 408


>02_04_0507 +
           23546911-23546953,23547011-23547111,23547695-23547810,
           23547897-23547996,23548027-23548215,23548303-23548363,
           23548469-23548566,23548943-23549085,23549228-23549311,
           23549423-23549512,23549599-23549644
          Length = 356

 Score =  248 bits (608), Expect = 3e-66
 Identities = 124/177 (70%), Positives = 141/177 (79%)
 Frame = -3

Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
           LAPLAKVI+D F I EGLM            VDGPS K WR GR A  NIIP+STGAAKA
Sbjct: 178 LAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKA 237

Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
           VGKV+PALNGKLTGMAFRVP  +VSVVDLTVRL KPASY+ IK  +KE AEG LKGILGY
Sbjct: 238 VGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGY 297

Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQS 210
            E+ +VS+DF GDS SSIFDA AGI+L+D FVKL+SWYDNE+GYS+RVIDLI+++ S
Sbjct: 298 VEEDLVSTDFQGDSRSSIFDAKAGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHS 354


>02_01_0533 +
           3868230-3868564,3869040-3869098,3869187-3869225,
           3869629-3869729,3870288-3870400,3870976-3871075,
           3871170-3871316,3871442-3871502,3871616-3871713,
           3871786-3871928,3872221-3872304,3872389-3872478,
           3872574-3872628
          Length = 474

 Score =  241 bits (591), Expect = 3e-64
 Identities = 116/175 (66%), Positives = 139/175 (79%)
 Frame = -3

Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
           LAPLAKV+H+ F I EGLM            VDGPS K WR GRGA QNIIP+STGAAKA
Sbjct: 293 LAPLAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKA 352

Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
           VGKV+P LNGKLTGMAFRVP  NVSVVDLT R+ K ASY+ +K  +K A+EG LKGILGY
Sbjct: 353 VGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGY 412

Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
           T++ VVS+DF+GD+ SSIFDA AGI L+ +F+KL+SWYDNE+GYS+RV+DLI ++
Sbjct: 413 TDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIAHM 467


>04_04_0120 +
           22911863-22911904,22912002-22912112,22912212-22912764,
           22912852-22913354
          Length = 402

 Score =  138 bits (333), Expect = 6e-33
 Identities = 75/178 (42%), Positives = 101/178 (56%)
 Frame = -3

Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
           LAP  K++   F I +G M            +D     L R  R A  NI+P STGAAKA
Sbjct: 224 LAPFVKILDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKA 282

Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
           V  V+P L GKL G+A RVP  NVSVVDL V++ K    E + Q  +++A   LKGIL  
Sbjct: 283 VALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDSAANELKGILEV 342

Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
            +  +VS DF     S   DA+  + + D+ VK+I+WYDNE+GYS RV+DL   + ++
Sbjct: 343 CDVPLVSVDFRCSDVSCTIDASLSMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANQ 400


>03_01_0208 +
           1642041-1642118,1642200-1642310,1643157-1643318,
           1643433-1643600,1643683-1643843,1643930-1643991,
           1644078-1644127,1644247-1644653,1644760-1644895
          Length = 444

 Score =  138 bits (333), Expect = 6e-33
 Identities = 76/179 (42%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
 Frame = -3

Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
           LAP  K++ + F I +G M            +D     L R  R A  NI+P STGAAKA
Sbjct: 236 LAPFVKILDEEFGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKA 294

Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPA-SYEAIKQKVKEAAEGPLKGILG 384
           V  V+P L GKL G+A RVP  NVSVVDL +   K   + + +    ++AA GPL GIL 
Sbjct: 295 VALVLPQLKGKLNGIALRVPTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGILD 354

Query: 383 YTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
             +  +VS DF     SS  DA+  + + D+ VK+++WYDNE+GYS RV+DL   + SK
Sbjct: 355 VCDVPLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASK 413


>07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207
          Length = 153

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 256 YSLSYQLISFTKLSFKEIPAAASKIEECESPMK 354
           YSL  + +  TK  FK+      K EEC +P K
Sbjct: 77  YSLVMKCLENTKNDFKKCKTLIDKYEECSNPPK 109


>06_03_1221 - 28514952-28518152
          Length = 1066

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
 Frame = -3

Query: 644 DGPSGKLWRDGRGAQQNIIP--ASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLT 471
           DG   +LW  GRG    I P  A+  A   +     +L+G+   + F +P  N +VVD++
Sbjct: 72  DGAVTRLWLPGRGLGGTISPSIANLTALTYLNLSGNSLSGRFPDLLFALP--NATVVDVS 129

Query: 470 VRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAG-ISLN 297
                  S E     V  AA    +G L      V S+   G   S+I++     +SLN
Sbjct: 130 Y---NRLSGELPNAPVAAAAATNARGSLSLQVLDVSSNLLAGRFPSAIWEHTPRLVSLN 185


>05_02_0101 +
           6611694-6611834,6612651-6612734,6613035-6613096,
           6613304-6613322
          Length = 101

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -3

Query: 602 QQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKV 423
           QQ    A+TG  K V    P +NG  +GM     +  + +V + ++LG+ ++ +  K  +
Sbjct: 9   QQQTAAAATGVWKTVK---PFVNGGASGMLATCVIQPIDMVKVKIQLGEGSAAQVTKNML 65

Query: 422 KEAAEGPL-KGI 390
                G   KG+
Sbjct: 66  ANEGIGSFYKGL 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,379,531
Number of Sequences: 37544
Number of extensions: 342661
Number of successful extensions: 849
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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