Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11i24r
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 270 7e-73
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 270 7e-73
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 270 7e-73
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 268 2e-72
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 268 2e-72
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 266 1e-71
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 266 1e-71
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 266 1e-71
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 266 1e-71
AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical... 33 0.28
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 32 0.37
U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 28 6.0
AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical... 28 6.0
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 8.0
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 8.0
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 8.0
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 270 bits (662), Expect = 7e-73
Identities = 134/178 (75%), Positives = 147/178 (82%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+DNF I EGLM VDGPSGKLWRDGRGA QNIIPASTGAAKA
Sbjct: 163 LAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKA 222
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKVIP LNGKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL Y
Sbjct: 223 VGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAY 282
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
TEDQVVS+DF+ D HSSIFDA A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 283 TEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 270 bits (662), Expect = 7e-73
Identities = 134/178 (75%), Positives = 147/178 (82%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+DNF I EGLM VDGPSGKLWRDGRGA QNIIPASTGAAKA
Sbjct: 163 LAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKA 222
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKVIP LNGKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL Y
Sbjct: 223 VGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAY 282
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
TEDQVVS+DF+ D HSSIFDA A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 283 TEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 270 bits (662), Expect = 7e-73
Identities = 134/178 (75%), Positives = 147/178 (82%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+DNF I EGLM VDGPSGKLWRDGRGA QNIIPASTGAAKA
Sbjct: 163 LAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKA 222
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKVIP LNGKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL Y
Sbjct: 223 VGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAY 282
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
TEDQVVS+DF+ D HSSIFDA A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 283 TEDQVVSTDFVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 268 bits (658), Expect = 2e-72
Identities = 133/178 (74%), Positives = 146/178 (82%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+DNF I EGLM VDGPSGKLWRDGRGA QNIIPASTGAAKA
Sbjct: 163 LAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKA 222
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKVIP LNGKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL Y
Sbjct: 223 VGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAY 282
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
TEDQVVS+DF+ D HSSIFD A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 283 TEDQVVSTDFVSDPHSSIFDTGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 268 bits (658), Expect = 2e-72
Identities = 133/178 (74%), Positives = 146/178 (82%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+DNF I EGLM VDGPSGKLWRDGRGA QNIIPASTGAAKA
Sbjct: 163 LAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKA 222
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKVIP LNGKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL Y
Sbjct: 223 VGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAY 282
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
TEDQVVS+DF+ D HSSIFD A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 283 TEDQVVSTDFVSDPHSSIFDTGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 266 bits (651), Expect = 1e-71
Identities = 130/178 (73%), Positives = 147/178 (82%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+DNF I EGLM VDGPSGKLWRDGRGA QNIIPASTGAAKA
Sbjct: 163 LAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKA 222
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKVIP LNGKLTGMAFRVP +VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL Y
Sbjct: 223 VGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAY 282
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
TEDQVVS+DF+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 283 TEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 266 bits (651), Expect = 1e-71
Identities = 130/178 (73%), Positives = 147/178 (82%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+DNF I EGLM VDGPSGKLWRDGRGA QNIIPASTGAAKA
Sbjct: 163 LAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKA 222
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKVIP LNGKLTGMAFRVP +VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL Y
Sbjct: 223 VGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAY 282
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
TEDQVVS+DF+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 283 TEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 266 bits (651), Expect = 1e-71
Identities = 130/178 (73%), Positives = 147/178 (82%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+DNF I EGLM VDGPSGKLWRDGRGA QNIIPASTGAAKA
Sbjct: 163 LAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKA 222
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKVIP LNGKLTGMAFRVP +VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL Y
Sbjct: 223 VGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAY 282
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
TEDQVVS+DF+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 283 TEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 266 bits (651), Expect = 1e-71
Identities = 130/178 (73%), Positives = 147/178 (82%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+DNF I EGLM VDGPSGKLWRDGRGA QNIIPASTGAAKA
Sbjct: 163 LAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKA 222
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKVIP LNGKLTGMAFRVP +VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL Y
Sbjct: 223 VGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAY 282
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
TEDQVVS+DF+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 283 TEDQVVSTDFVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340
>AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical
protein Y71H2AM.3 protein.
Length = 483
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 491 VSVVDLTVRLGKPASYEAIKQKVKEAAEGPL 399
V+V D +R+G P + EA+ ++ KEAA GP+
Sbjct: 62 VNVTDNYIRIGAPPTPEALIKREKEAANGPM 92
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 32.3 bits (70), Expect = 0.37
Identities = 24/85 (28%), Positives = 32/85 (37%)
Frame = +1
Query: 391 MPFKGPSAASLTFCLMAS*LAGFPRRTVRSTTDTLATGTRNAIPVSLPLRAGITLPTALA 570
+P P+AA C A+ A P + TD+ RNA A P
Sbjct: 445 VPAPAPAAAPAPDCGSAAPAAAAPAAAAPAATDSGYRSKRNAYGDEQVTPAPAAAPAPAD 504
Query: 571 APVEAGMMFC*APRPSRHNFPEGPS 645
APVE + AP P+ P P+
Sbjct: 505 APVEQAPVAVPAPAPAAAPAPAAPA 529
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/82 (28%), Positives = 31/82 (37%)
Frame = +1
Query: 391 MPFKGPSAASLTFCLMAS*LAGFPRRTVRSTTDTLATGTRNAIPVSLPLRAGITLPTALA 570
+P P+AA C A+ A P + TD+ RNA A P
Sbjct: 117 VPAPAPAAAPAPDCGSAAPAAAAPAAAAPAATDSGYRSKRNAYGDEQVTPAPAAAPAPAD 176
Query: 571 APVEAGMMFC*APRPSRHNFPE 636
APVE + AP P+ P+
Sbjct: 177 APVEQAPVAVPAPAPAAAPAPD 198
>U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical
protein ZK1248.7 protein.
Length = 363
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 575 GAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLK 396
G + VI N KL G+ + V A S+ D + +G S K +G L
Sbjct: 83 GKRLTLENVINKTNMKLGGLNYTVSDAKKSMTDEQLIIGVGVSAPPAGTKYMMDNKGHLN 142
Query: 395 G-ILGYTEDQVVSSDFIGD 342
I+G+ + V + +F+GD
Sbjct: 143 PQIIGFASNAVANHEFVGD 161
>Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical
protein R06C7.1 protein.
Length = 945
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 575 GAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLK 396
G + +I N KL G+ + V A S+ D + +G S K +G L
Sbjct: 639 GKRLTLENIINKTNVKLGGLNYTVSDAKKSMTDEQLIIGVGVSAPPAGTKYMMDNKGHLN 698
Query: 395 G-ILGYTEDQVVSSDFIGD 342
I+G+ + V + +F+GD
Sbjct: 699 PQIIGFASNAVANHEFVGD 717
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 446 YEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLND 294
Y Q +KE EG LK G TE++ + S + + S+I D A + L +
Sbjct: 717 YSKCSQYIKELEEGKLKAQPGCTEEETLESIILREL-STIRDHAGQVCLRN 766
>AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical
protein F55A12.1 protein.
Length = 892
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 575 GAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLK 396
G + +I N KL G+ + V + S+ D + +G S K +G L
Sbjct: 586 GKRLTLENIINKTNLKLGGLNYTVSDSKKSMTDEQLIIGVGVSAPPAGTKFMMDNKGHLN 645
Query: 395 G-ILGYTEDQVVSSDFIGD 342
I+G+ + V + +F+GD
Sbjct: 646 PQIIGFASNAVANHEFVGD 664
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 431 QKVKEAAEGPLKGILGYTEDQVVSSDFIG 345
QK++ E P++ +L Y ++ VSS+ IG
Sbjct: 1374 QKIETPTENPIRSLLIYMNEKSVSSEAIG 1402
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 431 QKVKEAAEGPLKGILGYTEDQVVSSDFIG 345
QK++ E P++ +L Y ++ VSS+ IG
Sbjct: 1412 QKIETPTENPIRSLLIYMNEKSVSSEAIG 1440
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 431 QKVKEAAEGPLKGILGYTEDQVVSSDFIG 345
QK++ E P++ +L Y ++ VSS+ IG
Sbjct: 1374 QKIETPTENPIRSLLIYMNEKSVSSEAIG 1402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,255,542
Number of Sequences: 27780
Number of extensions: 305458
Number of successful extensions: 717
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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