Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11i24r
(742 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 250 7e-67
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 247 7e-66
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 246 1e-65
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 244 5e-65
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 143 1e-34
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 140 7e-34
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 139 2e-33
At5g10500.1 68418.m01216 kinase interacting family protein simil... 31 0.80
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 29 3.2
At3g12685.1 68416.m01583 expressed protein contains Pfam domain,... 29 4.3
At1g74430.1 68414.m08623 myb family transcription factor (MYB95)... 28 5.7
At1g24350.1 68414.m03071 expressed protein contains Pfam domain,... 28 5.7
At1g17360.1 68414.m02116 COP1-interacting protein-related simila... 28 7.5
At3g49450.1 68416.m05405 F-box family protein contains F-box dom... 27 9.9
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 27 9.9
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 250 bits (612), Expect = 7e-67
Identities = 121/175 (69%), Positives = 142/175 (81%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKV+H+ F I EGLM VDGPS K WR GRGA QNIIP+STGAAKA
Sbjct: 241 LAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKA 300
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKV+P LNGKLTGMAFRVP +NVSVVDLT RL K ASYE +K +K A+EGPLKGILGY
Sbjct: 301 VGKVLPELNGKLTGMAFRVPTSNVSVVDLTCRLEKGASYEDVKAAIKHASEGPLKGILGY 360
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
T++ VVS+DF+GDS SSIFDA AGI L+ +FVKL+SWYDNE+GYS+RV+DLI+++
Sbjct: 361 TDEDVVSNDFVGDSRSSIFDANAGIGLSKSFVKLVSWYDNEWGYSNRVLDLIEHM 415
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 247 bits (604), Expect = 7e-66
Identities = 120/175 (68%), Positives = 141/175 (80%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKV+H+ F I EGLM VDGPS K WR GRGA QNIIP+STGAAKA
Sbjct: 239 LAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKA 298
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKV+P LNGKLTGMAFRVP NVSVVDLT RL K ASYE +K +K A+EGPL+GILGY
Sbjct: 299 VGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKDASYEDVKAAIKFASEGPLRGILGY 358
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
TE+ VVS+DF+GDS SSIFDA AGI L+ +F+KL+SWYDNE+GYS+RV+DLI+++
Sbjct: 359 TEEDVVSNDFLGDSRSSIFDANAGIGLSKSFMKLVSWYDNEWGYSNRVLDLIEHM 413
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 246 bits (602), Expect = 1e-65
Identities = 121/175 (69%), Positives = 141/175 (80%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+D F I EGLM VDGPS K WR GR A NIIP+STGAAKA
Sbjct: 161 LAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKA 220
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKV+PALNGKLTGM+FRVP +VSVVDLTVRL K A+Y+ IK+ +KE +EG LKGILGY
Sbjct: 221 VGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKLKGILGY 280
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
TED VVS+DF+GD+ SSIFDA AGI+L+D FVKL+SWYDNE+GYSSRV+DLI ++
Sbjct: 281 TEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHM 335
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 244 bits (597), Expect = 5e-65
Identities = 119/175 (68%), Positives = 141/175 (80%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAPLAKVI+D F I EGLM VDGPS K WR GR A NIIP+STGAAKA
Sbjct: 161 LAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKA 220
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
VGKV+P+LNGKLTGM+FRVP +VSVVDLTVRL K A+Y+ IK+ +KE +EG +KGILGY
Sbjct: 221 VGKVLPSLNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKMKGILGY 280
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYI 216
TED VVS+DF+GD+ SSIFDA AGI+L+D FVKL+SWYDNE+GYSSRV+DLI ++
Sbjct: 281 TEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHM 335
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 143 bits (346), Expect = 1e-34
Identities = 77/179 (43%), Positives = 106/179 (59%), Gaps = 1/179 (0%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAP AKV+ + F I +G M +D L R R A NI+P STGAAKA
Sbjct: 240 LAPFAKVLDEEFGIVKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKA 298
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPA-SYEAIKQKVKEAAEGPLKGILG 384
V V+P L GKL G+A RVP NVSVVDL + + K + E + + ++AA GP+KGIL
Sbjct: 299 VSLVLPQLKGKLNGIALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILD 358
Query: 383 YTEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 207
+ +VS DF S+ D++ + + D+ VK+++WYDNE+GYS RV+DL + SK
Sbjct: 359 VCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVASK 417
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 140 bits (340), Expect = 7e-34
Identities = 77/171 (45%), Positives = 100/171 (58%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAP KV+ F I +G M +D L R R A NI+P STGAAKA
Sbjct: 221 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKA 279
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
V V+P L GKL G+A RVP NVSVVDL V++ K E + ++AAE LKGIL
Sbjct: 280 VALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDV 339
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDL 228
++ +VS DF SS D++ + + D+ VK+I+WYDNE+GYS RV+DL
Sbjct: 340 CDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 390
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 139 bits (336), Expect = 2e-33
Identities = 75/171 (43%), Positives = 100/171 (58%)
Frame = -3
Query: 740 LAPLAKVIHDNFEIGEGLMXXXXXXXXXXXXVDGPSGKLWRDGRGAQQNIIPASTGAAKA 561
LAP KV+ F I +G M +D L R R A NI+P STGAAKA
Sbjct: 218 LAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDL-RRARAAALNIVPTSTGAAKA 276
Query: 560 VGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGY 381
V V+P L GKL G+A RVP NVSVVDL V++ K E + +++AE LKGIL
Sbjct: 277 VALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDV 336
Query: 380 TEDQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDL 228
++ +VS DF S+ D++ + + D+ VK+I+WYDNE+GYS RV+DL
Sbjct: 337 CDEPLVSVDFRCSDFSTTIDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDL 387
>At5g10500.1 68418.m01216 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 848
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 256 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 387
Y +LISF + SFK A A + + +++ +TT +SV+P
Sbjct: 59 YKRRPELISFVEESFKAYRALAERYDHISKELQNANTTIASVFP 102
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1
Query: 256 YSLSYQLISFTKLSFKEIPAAASKIEECESPMKSEDTT*SSVYP 387
Y +LISF + S++ A A + + + +++ +TT +SV+P
Sbjct: 3 YKKRPELISFVEESYRAYRALAERYDHISTELQNANTTIASVFP 46
>At3g12685.1 68416.m01583 expressed protein contains Pfam domain,
PF02681: Uncharacterized BCR, COG1963
Length = 213
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = -3
Query: 575 GAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLK 396
G + VGK LN KLT A R V ++ G ++ +++ E PLK
Sbjct: 135 GVRREVGKHAKVLN-KLTANARRSEVMSLK--------GNESNKALTSEEISEEIAPPLK 185
Query: 395 GILGYTEDQVVSSDFIG 345
+G+TE +V++ G
Sbjct: 186 ESIGHTEVEVIAGALFG 202
>At1g74430.1 68414.m08623 myb family transcription factor (MYB95)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 271
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 513 CHSSQLAIKSRDNLTHSFGSTSRGRNDVLLSTTAITP*FSRRSINSFLCSSCG 671
C +LA K D +TH +T+ DV S+T +P S S + CSS G
Sbjct: 111 CLKKRLAKKGIDPMTHEPTTTTSLTVDVTSSSTTSSPTPSPTSSSFSSCSSTG 163
>At1g24350.1 68414.m03071 expressed protein contains Pfam domain,
PF02681: Uncharacterized BCR, COG1963
Length = 168
Score = 28.3 bits (60), Expect = 5.7
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Frame = -3
Query: 590 IPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVV--DLT-VRLGKPASYEAIKQKVK 420
+P+S A V L G F + + SVV D T VRL E + Q V
Sbjct: 61 MPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVVMYDATGVRLHAGRQAEVLNQIVY 120
Query: 419 E-------AAEGPLKGILGYTEDQVVSSDFIGDS 339
E A PL+ +LG+T QVV+ +G +
Sbjct: 121 ELPAEHPLAESRPLRELLGHTPPQVVAGGMLGSA 154
>At1g17360.1 68414.m02116 COP1-interacting protein-related similar
to COP1-Interacting Protein 7 (CIP7) (GI:3327870)
[Arabidopsis thaliana]
Length = 1032
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 434 KQKVKEAAEGPLKGILGYTE-DQVVSSDFIGDSHSSIFDAAAGISLNDNFVKLIS 273
+++ KE E P+KG E + +V + IGD S+ + S N+N+ L S
Sbjct: 814 EEEEKEVLENPVKGEEEAREMETLVVEEDIGDETPSLTEIVENSSENENYTSLRS 868
>At3g49450.1 68416.m05405 F-box family protein contains F-box domain
Pfam:PF00646
Length = 397
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = -3
Query: 611 RGAQQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIK 432
R A+ I STG K++ KV +T + + V+ +T+R KP ++A +
Sbjct: 146 RDARMMICNPSTGQFKSLPKVRSCRGNVITYIGYNPIEKQYKVLCMTIR-EKPFKFKAEE 204
Query: 431 QKVKEAAEGPLK 396
+V G LK
Sbjct: 205 HQVLTLGTGKLK 216
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 403 GPSAASLTFCLMAS*LAGFPRRT-VRSTTDTLATGTRNAIPVSLPLRAG 546
GP + + C MA+ AGFP +R+ ++G + V+ ++AG
Sbjct: 99 GPGSQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAG 147
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,205,482
Number of Sequences: 28952
Number of extensions: 274600
Number of successful extensions: 793
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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