Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i18r
         (572 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   2.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.3  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   9.3  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    23   9.3  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 418 TVLGLLCIL*PAKAQGSAVQKEVERAKTECTTKCFEVSYPR 296
           TVLG L +   +  Q   + + +E    E T+KC ++ YPR
Sbjct: 345 TVLGTLSLKRISTKQTELLCESIESI-IETTSKCNDIIYPR 384


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 360  KKKLRERRLNAQQNASRSRTL 298
            K+K  + +LN+ QN  R+ TL
Sbjct: 1583 KRKENDSKLNSDQNKRRTMTL 1603


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 30  RCSSPSSRIGGVL 68
           R  SPSS++GGV+
Sbjct: 82  RADSPSSQVGGVI 94


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -3

Query: 354 KLRERRLNAQQNASRSRTLGGPVPDMNDHEAMQRFFLQQ 238
           +   R+   QQ   ++ ++ G    ++DH+ +Q+  LQQ
Sbjct: 18  RAERRQQQQQQQQLQTTSIAGGRLSVDDHQPLQQKNLQQ 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,352
Number of Sequences: 2352
Number of extensions: 11169
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)