Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i17r
         (382 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   0.78 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   1.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   4.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   7.3  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +3

Query: 33  KNRFSIWGQEIPP*SSL*WENRTCTACSCKPPMVQGWSSCS--KIHQDYAKPDAEYRTQL 206
           +++ +I+G  + P  +L +E      C+ + P V G   CS    ++D A    + R + 
Sbjct: 75  RDKDAIYGHPLFPLLALIFEKCELATCTPREPGVAGGDVCSSESFNEDIAVFSKQIRQEK 134

Query: 207 -HHILSPHI 230
            ++I  P +
Sbjct: 135 PYYIADPEV 143


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 105 YKFYSPIRDYSKEESPAPKY 46
           + FY+P R+  + + PAP Y
Sbjct: 238 FDFYTPKRNPKEADYPAPLY 257


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 105 YKFYSPIRDYSKEESPAPKY 46
           + FY+P R+  + + P+P Y
Sbjct: 246 FDFYTPARNPKEADYPSPLY 265


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 169 ITQSQTQSIEHSSTTSYPHTYI 234
           +T +  + IE++STT   HT +
Sbjct: 351 LTNTHKRKIENTSTTFNAHTVL 372


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 6/19 (31%), Positives = 7/19 (36%)
 Frame = +3

Query: 102 CTACSCKPPMVQGWSSCSK 158
           C  C C+      W  C K
Sbjct: 873 CVTCKCENGKPTCWRECDK 891


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -1

Query: 373 YLQSISISTAIFSLWTVFSNLQRN*VIQNARTEPLKFEEA*GFD 242
           YL+++     I  +WT  S+ Q   ++ N     L   +A  FD
Sbjct: 432 YLENLPSDKYIIQIWTTGSDPQVRNLLDNGYRVILSNYDALYFD 475


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,109
Number of Sequences: 336
Number of extensions: 2173
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)