Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i17r
         (382 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g08150.1 68414.m00898 sodium/hydrogen exchanger family protei...    30   0.45 
At4g02540.1 68417.m00347 DC1 domain-containing protein contains ...    30   0.60 
At3g49210.1 68416.m05378 expressed protein                             30   0.60 
At1g66450.1 68414.m07549 DC1 domain-containing protein contains ...    29   0.79 
At1g65660.1 68414.m07450 zinc knuckle (CCHC-type) family protein...    29   0.79 
At4g26380.1 68417.m03795 DC1 domain-containing protein contains ...    28   1.8  
At2g07560.1 68415.m00875 ATPase, plasma membrane-type, putative ...    28   1.8  
At1g15980.1 68414.m01917 expressed protein                             28   1.8  
At3g49200.1 68416.m05377 hypothetical protein                          27   5.6  
At2g44600.1 68415.m05552 expressed protein                             27   5.6  
At5g66470.1 68418.m08382 expressed protein                             26   7.4  
At5g13250.1 68418.m01522 hypothetical protein                          26   7.4  
At4g29140.1 68417.m04170 MATE efflux protein-related several hyp...    26   7.4  
At3g23740.1 68416.m02985 expressed protein                             26   7.4  
At3g04900.1 68416.m00532 heavy-metal-associated domain-containin...    26   7.4  
At2g07300.1 68415.m00837 hypothetical protein                          26   7.4  
At4g00230.1 68417.m00025 subtilisin-like serine endopeptidase (X...    26   9.7  
At2g40230.1 68415.m04947 transferase family protein similar to t...    26   9.7  
At1g09660.1 68414.m01084 KH domain-containing quaking protein, p...    26   9.7  

>At1g08150.1 68414.m00898 sodium/hydrogen exchanger family protein
           contains InterPro entry IPR006153: Sodium/hydrogen
           exchanger
          Length = 815

 Score = 30.3 bits (65), Expect = 0.45
 Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -3

Query: 194 ILCVW--LCVILMYLGTRRPTLNHGRLTGTS-STSSILPSETTLRRNLLPPNTKP 39
           +LC+W    + L  +G   P +    + G + S +++LP++ T++  L P +T+P
Sbjct: 75  VLCLWQFFYLSLKKIGLPVPKITSMMIAGAALSQTNLLPNDWTIQHILFPDDTRP 129


>At4g02540.1 68417.m00347 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 822

 Score = 29.9 bits (64), Expect = 0.60
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 90  ENRTCTACSCKPPMVQGWSSCSKIHQDYAKPDAEYRTQLHHILSPHIHT 236
           EN+ C AC+  P     + SC +      +  A +R ++HH   PH+ T
Sbjct: 552 ENKLCQACTT-PIYFGNFFSCMQCDFILHEKCANFRRKIHHPTHPHLLT 599


>At3g49210.1 68416.m05378 expressed protein
          Length = 518

 Score = 29.9 bits (64), Expect = 0.60
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +1

Query: 130 WFRVGLLVPRYIRITQSQTQSIEHSSTTSYPHTYI 234
           W R  ++V  ++ ++  QTQ+IE+ +  ++  TY+
Sbjct: 92  WVRTNVVVTDHVIVSDIQTQNIENGNADAFLETYV 126


>At1g66450.1 68414.m07549 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 700

 Score = 29.5 bits (63), Expect = 0.79
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 90  ENRTCTACSCKPPMVQG-WSSCSKIHQDYAKPDAEYRTQLHHILSPHIHT 236
           EN+ C AC    P+  G + SC K +    +  A +  ++HH + PH+ T
Sbjct: 422 ENKLCQACIT--PIYSGKFYSCMKCNFILHEECANFSRKIHHPIHPHMLT 469


>At1g65660.1 68414.m07450 zinc knuckle (CCHC-type) family protein
           contains Pfam domain, PF00098: Zinc knuckle
          Length = 535

 Score = 29.5 bits (63), Expect = 0.79
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 174 RNPDVSWNKKTNPEPWEAYRNKQYKFYSPIRDY 76
           R  +V +N    PE  EAYR K+     P++D+
Sbjct: 502 RKYNVKYNNDVTPEEMEAYRMKRVHHEDPMKDF 534


>At4g26380.1 68417.m03795 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 1016

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +3

Query: 90  ENRTCTACSCKPPMVQGWSSCSKIHQDYAKPDAEYRTQLHHILSPHIHT 236
           E++ C AC   P     + SC++ +    +  A +  ++HH + PH+ T
Sbjct: 762 EDKLCQAC-VMPIYFGNFYSCTQCNYILHEACANFSRKMHHPVHPHVLT 809


>At2g07560.1 68415.m00875 ATPase, plasma membrane-type, putative /
           proton pump, putative similar to P-type
           H(+)-transporting ATPase from [Phaseolus vulgaris]
           GI:758250, [Lycopersicon esculentum] GI:1621440,
           SP|Q03194 {Nicotiana plumbaginifolia}, [Solanum
           tuberosum] GI:435001; contains InterPro accession
           IPR001757: ATPase, E1-E2 type
          Length = 949

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +1

Query: 73  RVVSDGRI---ELVLLVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTT--SYPHTYIQ 237
           +V+ DGR    E  +LVP  L   ++G +VP   R+ +     I+ S+ T  S P T  Q
Sbjct: 136 KVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALTGESLPATKHQ 195

Query: 238 RDQ 246
            D+
Sbjct: 196 GDE 198


>At1g15980.1 68414.m01917 expressed protein
          Length = 461

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = -2

Query: 195 YTLRLALRNPDVSWN--KKTNP--EPWEAYRNKQYKFYSPIRDYSKEESPAP 52
           +  RL  R+ DVS N  KK NP  +P+++  +   ++ S   D  ++E P P
Sbjct: 32  FQTRLTSRSSDVSVNLKKKNNPWLDPFDSGEDPDNEYGSLFADGKQDEDPRP 83


>At3g49200.1 68416.m05377 hypothetical protein
          Length = 507

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +1

Query: 130 WFRVGLLVPRYIRITQSQTQSIEHSSTTSYPHTYI 234
           W R  ++V  ++ I + QTQ IE+++   +  +Y+
Sbjct: 90  WVRTNVVVEDHVIIPKIQTQHIENANADVFLESYV 124


>At2g44600.1 68415.m05552 expressed protein
          Length = 313

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 117 CKPPMVQGWSSCSKIHQDYAKPDAEYRTQLHHILSPHIHTEGS 245
           C  P+V+   +CS   +    PD  Y  +L     PH+ T  S
Sbjct: 252 CLSPLVRAKPNCSSNWKAKFPPDFGYSGELKSPAKPHLSTAAS 294


>At5g66470.1 68418.m08382 expressed protein
          Length = 427

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 166 RITQSQTQSIEHSSTTSYPHTYIQRDQSLMLLQ 264
           R+T+S  Q+  H+STTSY  T +   + L + Q
Sbjct: 37  RVTKSHLQA--HNSTTSYGRTELSSSKKLWIRQ 67


>At5g13250.1 68418.m01522 hypothetical protein 
          Length = 286

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 135 QGWSSCSKIHQDYAKPDAEYRTQ 203
           QGW   S  H++  KPD ++R Q
Sbjct: 119 QGWLRLSLGHEEDVKPDLDHRQQ 141


>At4g29140.1 68417.m04170 MATE efflux protein-related several
           hypothetical proteins - Arabidopsis thaliana; contains
           Pfam profile PF01554: Uncharacterized membrane protein
           family
          Length = 532

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +1

Query: 49  FGGRRFLLRVVSDGRIELVLLV---PVSLPWFRVG 144
           FG  RF L  ++  R  + LLV   P+S+ WF VG
Sbjct: 126 FGAHRFKLLSLTLHRTVVFLLVCCVPISVLWFNVG 160


>At3g23740.1 68416.m02985 expressed protein 
          Length = 542

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 159 IHQDYAKPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGS 278
           ++ + + PD E  TQ+ H++    +  GS+   SS L GS
Sbjct: 297 VNLEQSDPDKEQETQIKHVIPDTENNLGSEIPLSSPLVGS 336


>At3g04900.1 68416.m00532 heavy-metal-associated domain-containing
           protein contains Pfam profile PF00403:
           Heavy-metal-associated domain
          Length = 208

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -2

Query: 186 RLALRNPDVSWNKKTNPEPWEAYRNKQYKFYSPIRDYSKEESPAP 52
           RL    P V+  K   P P++ Y N  +     + +Y  +++P P
Sbjct: 160 RLKYEEPKVTPRKPPAPYPFDYYENLGFPPSDSLFNYFSDDNPQP 204


>At2g07300.1 68415.m00837 hypothetical protein 
          Length = 219

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 126 PMVQGWSSCSKIHQDYAKPDAEYRTQLHHIL 218
           P++ GW+ C  I + Y K   ++  +LH IL
Sbjct: 12  PLITGWTICVMILRIYKKMLNDHSFELHLIL 42


>At4g00230.1 68417.m00025 subtilisin-like serine endopeptidase
           (XSP1) identical to subtilisin-type serine endopeptidase
           XSP1 GI:6708179 from [Arabidopsis thaliana]
          Length = 749

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 161 TSGLRKARRRV*NTAPPHPIPTHTYRGIKAL 253
           TS L   RRRV N  PP  + T T R  K +
Sbjct: 659 TSTLAVFRRRVTNVGPPSSVYTATVRAPKGV 689


>At2g40230.1 68415.m04947 transferase family protein similar to
           taxadienol acetyl transferase from Taxus cuspidata
           [gi:6978038]; contains Pfam transferase family domain
           PF002458
          Length = 433

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = -2

Query: 228 CVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYRNKQYKFYSPIRD 79
           CV  G G A F TL   L    +S  +      W+    +Q    SPIRD
Sbjct: 160 CVSDGIGSAEFLTLFAELSKDSLSQTELKRKHLWD----RQLLMPSPIRD 205


>At1g09660.1 68414.m01084 KH domain-containing quaking protein,
           putative similar to GB:AAC67357
          Length = 298

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 147 KTNPEPWEAYRNKQYKFYSPIRDYSKEESPAPKY*TCFS 31
           K   E  + Y+ +Q K  + +    +EESP+P    C S
Sbjct: 245 KPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLS 283


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,858,353
Number of Sequences: 28952
Number of extensions: 191664
Number of successful extensions: 555
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 527724392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)