Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i16r
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S79502-1|AAB35145.1|  396|Drosophila melanogaster 26S protease r...    87   3e-17
AY089333-1|AAL90071.2|  433|Drosophila melanogaster AT14053p pro...    87   3e-17
AE014296-3569|AAF51741.1|  396|Drosophila melanogaster CG7619-PA...    87   3e-17
BT010293-1|AAQ23611.1| 1103|Drosophila melanogaster LD19434p pro...    31   2.0  
AE014296-3549|AAF51732.2| 1103|Drosophila melanogaster CG33214-P...    31   2.0  
AY118759-1|AAM50619.1|  656|Drosophila melanogaster GH09073p pro...    29   4.5  
AE014134-1040|AAF52336.2|  656|Drosophila melanogaster CG9144-PA...    29   4.5  

>S79502-1|AAB35145.1|  396|Drosophila melanogaster 26S protease
           regulatory complexnon-ATPase subunit protein.
          Length = 396

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 13/83 (15%)
 Frame = -3

Query: 353 DAMELSEEEQIALAMQMSMQ--------QEA--PQAEES---MDVSEEYAEVMNDPAFLQ 213
           D   ++EEEQIA AMQMSMQ        Q+A  P+ +E+   MDV E+Y+EV+ DPAFLQ
Sbjct: 298 DFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQ 357

Query: 212 SVLENLPGVDPQSEAIRNAMSTI 144
           SVLENLPGVDPQSEA+R+A+ ++
Sbjct: 358 SVLENLPGVDPQSEAVRDAVGSL 380



 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 40/70 (57%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -3

Query: 689 LNGKDTSTGGSHLVSVPAGGCVVLSEALITSXXXXXXXXXXXXXXXXP-FEFGVDPNVDP 513
           LNGKD +  GSHLVSVP G   VLS+AL++S                  FEFGVDPN DP
Sbjct: 160 LNGKDGT--GSHLVSVPRGS--VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDP 215

Query: 512 ELALALRVSM 483
           ELALALRVSM
Sbjct: 216 ELALALRVSM 225


>AY089333-1|AAL90071.2|  433|Drosophila melanogaster AT14053p
           protein.
          Length = 433

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 13/83 (15%)
 Frame = -3

Query: 353 DAMELSEEEQIALAMQMSMQ--------QEA--PQAEES---MDVSEEYAEVMNDPAFLQ 213
           D   ++EEEQIA AMQMSMQ        Q+A  P+ +E+   MDV E+Y+EV+ DPAFLQ
Sbjct: 335 DFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQ 394

Query: 212 SVLENLPGVDPQSEAIRNAMSTI 144
           SVLENLPGVDPQSEA+R+A+ ++
Sbjct: 395 SVLENLPGVDPQSEAVRDAVGSL 417



 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 40/70 (57%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -3

Query: 689 LNGKDTSTGGSHLVSVPAGGCVVLSEALITSXXXXXXXXXXXXXXXXP-FEFGVDPNVDP 513
           LNGKD +  GSHLVSVP G   VLS+AL++S                  FEFGVDPN DP
Sbjct: 197 LNGKDGT--GSHLVSVPRGS--VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDP 252

Query: 512 ELALALRVSM 483
           ELALALRVSM
Sbjct: 253 ELALALRVSM 262


>AE014296-3569|AAF51741.1|  396|Drosophila melanogaster CG7619-PA
           protein.
          Length = 396

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 13/83 (15%)
 Frame = -3

Query: 353 DAMELSEEEQIALAMQMSMQ--------QEA--PQAEES---MDVSEEYAEVMNDPAFLQ 213
           D   ++EEEQIA AMQMSMQ        Q+A  P+ +E+   MDV E+Y+EV+ DPAFLQ
Sbjct: 298 DFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQ 357

Query: 212 SVLENLPGVDPQSEAIRNAMSTI 144
           SVLENLPGVDPQSEA+R+A+ ++
Sbjct: 358 SVLENLPGVDPQSEAVRDAVGSL 380



 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 40/70 (57%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -3

Query: 689 LNGKDTSTGGSHLVSVPAGGCVVLSEALITSXXXXXXXXXXXXXXXXP-FEFGVDPNVDP 513
           LNGKD +  GSHLVSVP G   VLS+AL++S                  FEFGVDPN DP
Sbjct: 160 LNGKDGT--GSHLVSVPRGS--VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDP 215

Query: 512 ELALALRVSM 483
           ELALALRVSM
Sbjct: 216 ELALALRVSM 225


>BT010293-1|AAQ23611.1| 1103|Drosophila melanogaster LD19434p
           protein.
          Length = 1103

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -1

Query: 367 CLSVVMQWNSLKRSRLRLQCK*ACNKKHPRLKRAWMFLKNMQKL*MIQHFYRVC 206
           CL+ V  W+ L++ RL+L    AC   H  L+RA+  L   Q    +  FY  C
Sbjct: 119 CLNAVHLWSCLEQQRLKLLQNNAC---HQHLRRAYESLG--QDYSAVDEFYTAC 167


>AE014296-3549|AAF51732.2| 1103|Drosophila melanogaster CG33214-PA
           protein.
          Length = 1103

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = -1

Query: 367 CLSVVMQWNSLKRSRLRLQCK*ACNKKHPRLKRAWMFLKNMQKL*MIQHFYRVC 206
           CL+ V  W+ L++ RL+L    AC   H  L+RA+  L   Q    +  FY  C
Sbjct: 119 CLNAVHLWSCLEQQRLKLLQNNAC---HQHLRRAYESLG--QDYSAVDEFYTAC 167


>AY118759-1|AAM50619.1|  656|Drosophila melanogaster GH09073p
           protein.
          Length = 656

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -3

Query: 383 ERAIAMSLGRDAMELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAEVMND-PAFL 216
           ER     LG   +   +E + A+A       +  +  +SMDV EEY E+ N  P +L
Sbjct: 361 ERRSRARLGDATIHYLDEYRTAVATTNESNDDDDEEYDSMDVQEEYDEMENSIPKYL 417


>AE014134-1040|AAF52336.2|  656|Drosophila melanogaster CG9144-PA
           protein.
          Length = 656

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -3

Query: 383 ERAIAMSLGRDAMELSEEEQIALAMQMSMQQEAPQAEESMDVSEEYAEVMND-PAFL 216
           ER     LG   +   +E + A+A       +  +  +SMDV EEY E+ N  P +L
Sbjct: 361 ERRSRARLGDATIHYLDEYRTAVATTNESNDDDDEEYDSMDVQEEYDEMENSIPKYL 417


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,846,058
Number of Sequences: 53049
Number of extensions: 512166
Number of successful extensions: 1701
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)