Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i15f
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   4.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   4.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -2

Query: 371 EQTPTRTRLWRRGPPESPWHWSRPPTSKT 285
           ++T   TRLW R    +   WS P    T
Sbjct: 560 DETSLDTRLWPRAAAFAERVWSDPQLDVT 588


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 298 GGRDQCQGDSGG 333
           GGRD  +GD GG
Sbjct: 97  GGRDGDRGDGGG 108


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 364 VCSWGQYCAD 393
           VC WG+Y  D
Sbjct: 521 VCMWGEYVDD 530


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 72  QQRSSY*YCWCQLQSW 119
           +Q  S   CW  LQ+W
Sbjct: 186 KQVQSMPQCWIDLQTW 201


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 317  WHWSRPPTSKTP 282
            WH   PPTS+ P
Sbjct: 1374 WHPPIPPTSEKP 1385


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 258 STVNGSVTLDAGILIDGPDLDV 193
           S +  ++++D GIL + PD+ +
Sbjct: 471 SQLKNALSIDKGILREKPDVKI 492


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 76  CCYKLCWNYCVRCRGHCQQY 17
           C  KL W +C R   +C  +
Sbjct: 55  CELKLWWEFCQRNGHNCLDF 74


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 12/48 (25%), Positives = 19/48 (39%)
 Frame = -3

Query: 322 HPGTGRDHRRPKHQSTTC*R**HG*WVCNVGRRHSD*WSRPGRDGVAP 179
           +P TG    +P+    T  +   G W C+      + W R  R  + P
Sbjct: 683 NPSTGSKPGKPRSAFLTDLKLMGGKWSCDCDLGWVEVWERKRRQYLCP 730


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,640
Number of Sequences: 336
Number of extensions: 2934
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)