Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i14r
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical pr...    64   7e-11
Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical pr...    64   7e-11
Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical pr...    62   4e-10
L23648-15|AAM48526.1|  511|Caenorhabditis elegans Dipeptidyl pep...    35   0.068
L23648-13|AAM48525.1|  740|Caenorhabditis elegans Dipeptidyl pep...    35   0.068
AF043699-7|AAK84627.1|  927|Caenorhabditis elegans Dipeptidyl pe...    31   0.83 
AF043699-6|AAB97564.1|  931|Caenorhabditis elegans Dipeptidyl pe...    31   0.83 
U80023-4|AAG24038.1|  318|Caenorhabditis elegans Serpentine rece...    30   1.9  
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z81129-6|CAB03412.1|  799|Caenorhabditis elegans Hypothetical
           protein T23F1.7b protein.
          Length = 799

 Score = 64.5 bits (150), Expect = 7e-11
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = -2

Query: 717 DVTLLVDQLAGHDFYIMHGNADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSLAGVN 538
           DVT  +D        +MHG  DDNVH+QN+A L+  LQ + + F+ M YP++AHSL+   
Sbjct: 721 DVTKKLDNFKSTRLLLMHGLLDDNVHFQNSAILIDELQNRGVDFDLMVYPNQAHSLSSRT 780

Query: 537 MHRYNAMDRYWNRC 496
            H    M  +  +C
Sbjct: 781 SHVVGKMTHFLRQC 794


>Z81129-5|CAB03411.1|  779|Caenorhabditis elegans Hypothetical
           protein T23F1.7a protein.
          Length = 779

 Score = 64.5 bits (150), Expect = 7e-11
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = -2

Query: 717 DVTLLVDQLAGHDFYIMHGNADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSLAGVN 538
           DVT  +D        +MHG  DDNVH+QN+A L+  LQ + + F+ M YP++AHSL+   
Sbjct: 701 DVTKKLDNFKSTRLLLMHGLLDDNVHFQNSAILIDELQNRGVDFDLMVYPNQAHSLSSRT 760

Query: 537 MHRYNAMDRYWNRC 496
            H    M  +  +C
Sbjct: 761 SHVVGKMTHFLRQC 774


>Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical
           protein C27C12.7 protein.
          Length = 829

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
 Frame = -2

Query: 678 FYIMHGNADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSLAGVNMHRYNAMDRY-WN 502
           + + HG  DDNVHYQN+A+   ALQ+  I F Q+ Y +EAHSL+    H Y  + R+  N
Sbjct: 760 YLLAHGERDDNVHYQNSARWSEALQQNGIHFTQLVYANEAHSLSHKLFHLYGEVQRFLMN 819

Query: 501 RCLR 490
            C +
Sbjct: 820 DCFK 823


>L23648-15|AAM48526.1|  511|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 6, isoform b protein.
          Length = 511

 Score = 34.7 bits (76), Expect = 0.068
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -2

Query: 672 IMHGNADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSLAGV--NMHRYNAMDRYWNR 499
           I+ G  D  V    + + + AL++K IP   + YPDE H +     +M ++  ++ +  +
Sbjct: 369 IIQGANDPRVKQAESDQFVAALEKKHIPVTYLLYPDEGHGVRKPQNSMEQHGHIETFLQQ 428

Query: 498 CL 493
           CL
Sbjct: 429 CL 430


>L23648-13|AAM48525.1|  740|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 6, isoform a protein.
          Length = 740

 Score = 34.7 bits (76), Expect = 0.068
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -2

Query: 672 IMHGNADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSLAGV--NMHRYNAMDRYWNR 499
           I+ G  D  V    + + + AL++K IP   + YPDE H +     +M ++  ++ +  +
Sbjct: 598 IIQGANDPRVKQAESDQFVAALEKKHIPVTYLLYPDEGHGVRKPQNSMEQHGHIETFLQQ 657

Query: 498 CL 493
           CL
Sbjct: 658 CL 659


>AF043699-7|AAK84627.1|  927|Caenorhabditis elegans Dipeptidyl
            peptidase four (iv)family protein 3, isoform b protein.
          Length = 927

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 723  AGDVTLLVDQLAGHDFYIM--HGNADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSL 550
            A  +T LV++L      +M  HG  D+NVH+ +   L+    +K    E + +P+E H +
Sbjct: 832  ASSITGLVEKLPDEPNRLMLVHGLMDENVHFAHLTHLVDECIKKGKWHELVIFPNERHGV 891


>AF043699-6|AAB97564.1|  931|Caenorhabditis elegans Dipeptidyl
            peptidase four (iv)family protein 3, isoform a protein.
          Length = 931

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 723  AGDVTLLVDQLAGHDFYIM--HGNADDNVHYQNAAKLMRALQEKDIPFEQMSYPDEAHSL 550
            A  +T LV++L      +M  HG  D+NVH+ +   L+    +K    E + +P+E H +
Sbjct: 836  ASSITGLVEKLPDEPNRLMLVHGLMDENVHFAHLTHLVDECIKKGKWHELVIFPNERHGV 895


>U80023-4|AAG24038.1|  318|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 25 protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +3

Query: 15  YTTECNSTSIINY*FTYR*GSKIISRSNV*RT--KNIHNSTVKIPLHELILHKHLFIHIV 188
           + T C   +++ Y F  +  SK   + +V +T  KN+ N  VK+   +LIL   +F+ I 
Sbjct: 183 FITAC--LAVVAYTFIRKSLSKFARKMSVIKTNEKNLRNRLVKVATFKLILPSFIFLGIT 240

Query: 189 VY 194
           V+
Sbjct: 241 VF 242


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -3

Query: 722 PVTSRS*LTNWPVMTSTSCTETPTIMCTIKT 630
           P TS S  T     T+T+ TE PT   TIKT
Sbjct: 207 PSTSTSTTTTTTTSTTTTTTEAPTTTTTIKT 237


>Z50794-8|CAA90655.2|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = -2

Query: 444 KRYFAFSINSFMV*LHLWMMRNVLISL*CNYMLSRTTTVLVRFGIRNMPNCTRLLLELPL 265
           K  +   + +F + +   +MRN +IS+ C Y   +  TV+    I   P     +L   L
Sbjct: 125 KNIYLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTVMAAISIG--PGLGIFILPRTL 182

Query: 264 KHSFVNLN 241
           K   V  N
Sbjct: 183 KFIMVKYN 190


>Z49937-9|CAO78727.1|  450|Caenorhabditis elegans Hypothetical
           protein F59F5.1 protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = -2

Query: 444 KRYFAFSINSFMV*LHLWMMRNVLISL*CNYMLSRTTTVLVRFGIRNMPNCTRLLLELPL 265
           K  +   + +F + +   +MRN +IS+ C Y   +  TV+    I   P     +L   L
Sbjct: 125 KNIYLLMLATFGMGIGCGLMRNSIISIQCEYFKKKRNTVMAAISIG--PGLGIFILPRTL 182

Query: 264 KHSFVNLN 241
           K   V  N
Sbjct: 183 KFIMVKYN 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,432,890
Number of Sequences: 27780
Number of extensions: 313629
Number of successful extensions: 600
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)