Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i10r
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.99 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 25   NNWYSIIGNHGTASRCVPRIHYN 93
            +++Y  +  H     C P +HYN
Sbjct: 1219 SSFYVCVNGHLVPQNCAPGLHYN 1241


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = -2

Query: 287 NII*IKLSH*LQSNLIEFPNDS 222
           +++ +KL+H L S++  FP+D+
Sbjct: 16  SLLTLKLTHALSSSVQNFPSDA 37


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 509 IKLCINFVNSSQNIGKLK 562
           IKL IN + S  N  KLK
Sbjct: 136 IKLSINIILSDPNTNKLK 153


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -3

Query: 136 IETFFFF*LNSLAKRCSEFAGHTGLRSRDYQLW 38
           +E  F++      +R +E A   GL  R  ++W
Sbjct: 171 LEKEFYYSRYITIRRKAELANSLGLSERQVKIW 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,476
Number of Sequences: 336
Number of extensions: 2239
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)