Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i08r
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF078785-6|AAC27094.1|  337|Caenorhabditis elegans Serpentine re...    31   1.1  
Z81544-4|CAB04431.2|  329|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF002198-5|AAF99934.2|  329|Caenorhabditis elegans Serpentine re...    29   3.3  
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc...    29   4.3  
Z81475-4|CAB03911.1|  323|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81544-5|CAB04430.2|  323|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical pr...    28   7.5  
Z81124-9|CAB03379.2|  328|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>AF078785-6|AAC27094.1|  337|Caenorhabditis elegans Serpentine
           receptor, class x protein121 protein.
          Length = 337

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +2

Query: 248 VSILIPNAKFSIYNTYYYYINLVLCTISLAFSLVFMIQVSNTVIIDMN 391
           + I+I +   SI  TY  + NL+   I+L+FS+VF+  V   V+  +N
Sbjct: 242 ILIIIDSLNSSI--TYNMFPNLIFQFITLSFSMVFLRTVEGFVVFSIN 287


>Z81544-4|CAB04431.2|  329|Caenorhabditis elegans Hypothetical
           protein F49C5.2 protein.
          Length = 329

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 251 SILIPNAKFSIYNTYYYYINLVLCTISLAFSLVFMIQVSNTVIIDMNVYV 400
           SILI     +   TY  + NL    I+L+FS+VF+  V   V+  +N  +
Sbjct: 241 SILIIVDSLNSTITYNMFPNLFFQFITLSFSMVFLRTVEGFVVFSINTSI 290


>AF002198-5|AAF99934.2|  329|Caenorhabditis elegans Serpentine
           receptor, class x protein122 protein.
          Length = 329

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +2

Query: 251 SILIPNAKFSIYNTYYYYINLVLCTISLAFSLVFMIQVSNTVIIDMNVYV 400
           SILI     +   TY  + NL    I+L+FS+VF+  V   V+  +N  +
Sbjct: 241 SILIIVDSLNSTITYNMFPNLFFQFITLSFSMVFLRTVEGFVVFSINTSI 290


>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
           cyclase protein 19 protein.
          Length = 1143

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +2

Query: 257 LIPNAKFSIYNTYYYYINLVLCTISLAFSLVFMIQV 364
           L+ ++KF+    Y Y  N++  ++SL FSLV ++++
Sbjct: 97  LVTDSKFTDTERYPYLTNIMANSLSLGFSLVKLLEM 132


>Z81475-4|CAB03911.1|  323|Caenorhabditis elegans Hypothetical
           protein C24H11.4 protein.
          Length = 323

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 296 YYYINLVLCTISLAFSLVFMIQVSNTVIIDMNVYVLISLY 415
           YYYI  V+  + L F L+F+I   + V    + Y L+ LY
Sbjct: 11  YYYIAYVIFALPLNFLLIFLIWFKSPV--SFSAYRLLLLY 48


>Z81544-5|CAB04430.2|  323|Caenorhabditis elegans Hypothetical
           protein F49C5.1 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 251 SILIPNAKFSIYNTYYYYINLVLCTISLAFSLVFMIQVSNTVIIDMN 391
           SILI     +   TY  + NL    I+L+FS+VF+  +   VI  +N
Sbjct: 244 SILIIVDSLNSTITYNIFPNLFFQFITLSFSMVFLRTLEGFVIFSIN 290


>U40953-2|AAB52647.1|  483|Caenorhabditis elegans Hypothetical
           protein F53B1.2 protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -3

Query: 517 NHFICEYEHPSYTNCHTSRYCYFFTCV*IFLDKIVQ*NQNIDIHV 383
           +HFI EY    +T  HT  + +   C  IFL      + +ID+ +
Sbjct: 338 SHFITEYTPADWTGLHT--FTWVLNCFAIFLILAAHEHYSIDVFI 380


>Z81124-9|CAB03379.2|  328|Caenorhabditis elegans Hypothetical
           protein T21B4.12 protein.
          Length = 328

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 251 SILIPNAKFSIYNTYYYYINLVLCTISLAFSLVFMIQVSNTVIIDMN 391
           SILI     +   TY  + NL    I+L+FS+VF+  +   V+  +N
Sbjct: 239 SILIIVDSLNSTITYNLFPNLFFQFITLSFSMVFLRTLEGFVVFSIN 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,078,512
Number of Sequences: 27780
Number of extensions: 304664
Number of successful extensions: 734
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)