Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i08f
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   0.85 
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   2.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.9  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 403 MSHNKQSQYKETTLQNNLSWYYYK 474
           +SHNKQ  +KE T + +    Y++
Sbjct: 88  LSHNKQQMWKELTAKYDPDGIYFE 111


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 130 SLLRYFPLYRPTYETHLYRQTAKPSLVIYF 41
           S+   +P   P YE   Y++  KP  +  F
Sbjct: 275 SMYYQYPFGLPEYEYSFYQEVKKPKKITDF 304


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 180 SEHSRYVSILWLIFGFEVFFDTF 112
           SE + YVS+L L+F F  F   F
Sbjct: 132 SERNDYVSLLQLVFVFCYFIYLF 154


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 516 SISFDVIFFIFQCTLVII 463
           +IS   + F+F CTL+I+
Sbjct: 239 NISLVSLIFLFNCTLIIM 256


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 507 FDVIFFIFQCT 475
           FD+IF  F+CT
Sbjct: 148 FDLIFLSFRCT 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,001
Number of Sequences: 336
Number of extensions: 3417
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)