Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i07r
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 543 NCTRMSALSTVYKH-GRAYFSQTFFFFLHIN 632
           N T + AL T  ++ GR   S+ +FF LH++
Sbjct: 53  NSTVLLALWTRRRYAGRKKLSRMYFFILHLS 83


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 397 FTTKIMSNNKNNNHMIT 447
           FT KI  NN  NN M T
Sbjct: 482 FTYKITVNNSGNNRMGT 498


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 388  TSVIFFCKFNNMVLSVRHHFISFSCKFYYV 299
            +S+ FFC     +++   H   F+C  Y V
Sbjct: 977  SSLFFFCMAAEFIIAALLHPQEFNCLKYGV 1006


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 388  TSVIFFCKFNNMVLSVRHHFISFSCKFYYV 299
            +S+ FFC     +++   H   F+C  Y V
Sbjct: 977  SSLFFFCMAAEFIIAALLHPQEFNCLKYGV 1006


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 211  CSKNKISETVYEKLNGEIKKIFV*NC 134
            C K+ + +T+  +L G    I V NC
Sbjct: 2674 CGKHPLLKTLNNELRGTPSDISVTNC 2699


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,240
Number of Sequences: 336
Number of extensions: 3294
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)