Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i07f
         (590 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015A7F9A Cluster: UPI00015A7F9A related cluster; n...   135   6e-31
UniRef50_Q4RVF4 Cluster: Chromosome 15 SCAF14992, whole genome s...   100   2e-20
UniRef50_Q8BFR8 Cluster: Adult female vagina cDNA, RIKEN full-le...   100   2e-20
UniRef50_UPI0000F1E058 Cluster: PREDICTED: similar to Pbx3b home...    98   1e-19
UniRef50_UPI0000EB19BA Cluster: Pre-B-cell leukemia transcriptio...    88   1e-16
UniRef50_P41779 Cluster: Homeobox protein ceh-20; n=26; Eumetazo...    88   1e-16
UniRef50_UPI00015B54D8 Cluster: PREDICTED: similar to extradenti...    84   2e-15
UniRef50_Q4RVF5 Cluster: Chromosome 15 SCAF14992, whole genome s...    49   7e-05
UniRef50_UPI00015B54DA Cluster: PREDICTED: hypothetical protein;...    44   0.003

>UniRef50_UPI00015A7F9A Cluster: UPI00015A7F9A related cluster; n=1;
           Danio rerio|Rep: UPI00015A7F9A UniRef100 entry - Danio
           rerio
          Length = 438

 Score =  135 bits (327), Expect = 6e-31
 Identities = 62/75 (82%), Positives = 71/75 (94%)
 Frame = +3

Query: 288 RKQDIGEILQQIMNITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEE 467
           ++QDIG+ILQQIM ITDQSLDEAQA+KH LNCHRMKPALFSVLCEIKEKT LS+R++Q+E
Sbjct: 27  KQQDIGDILQQIMTITDQSLDEAQAKKHGLNCHRMKPALFSVLCEIKEKTGLSMRSSQDE 86

Query: 468 EPPDPQLMRLDNMLI 512
           EP DPQLMRLDNML+
Sbjct: 87  EPTDPQLMRLDNMLL 101


>UniRef50_Q4RVF4 Cluster: Chromosome 15 SCAF14992, whole genome
           shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 15
           SCAF14992, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 149

 Score =  100 bits (240), Expect = 2e-20
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = +3

Query: 288 RKQDIGEILQQIMNITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKT 437
           RKQDIG+ILQQIM ITDQSLDEAQARKH LNCHRMKPALF+VLCEIKEKT
Sbjct: 37  RKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKT 86


>UniRef50_Q8BFR8 Cluster: Adult female vagina cDNA, RIKEN
           full-length enriched library, clone:9930036F21
           product:pre B-cell leukemia transcription factor 1, full
           insert sequence; n=6; Euteleostomi|Rep: Adult female
           vagina cDNA, RIKEN full-length enriched library,
           clone:9930036F21 product:pre B-cell leukemia
           transcription factor 1, full insert sequence - Mus
           musculus (Mouse)
          Length = 102

 Score =  100 bits (240), Expect = 2e-20
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = +3

Query: 288 RKQDIGEILQQIMNITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKT 437
           RKQDIG+ILQQIM ITDQSLDEAQARKH LNCHRMKPALF+VLCEIKEKT
Sbjct: 39  RKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKT 88


>UniRef50_UPI0000F1E058 Cluster: PREDICTED: similar to Pbx3b
           homeodomain protein; n=1; Danio rerio|Rep: PREDICTED:
           similar to Pbx3b homeodomain protein - Danio rerio
          Length = 137

 Score = 98.3 bits (234), Expect = 1e-19
 Identities = 46/52 (88%), Positives = 48/52 (92%)
 Frame = +3

Query: 288 RKQDIGEILQQIMNITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVL 443
           RKQDIG+IL QIM ITDQSLDEAQA+KH LNCHRMKPALFSVLCEIKEKT L
Sbjct: 41  RKQDIGDILHQIMTITDQSLDEAQAKKHGLNCHRMKPALFSVLCEIKEKTGL 92


>UniRef50_UPI0000EB19BA Cluster: Pre-B-cell leukemia transcription
           factor 4 (Homeobox protein PBX4).; n=1; Canis lupus
           familiaris|Rep: Pre-B-cell leukemia transcription factor
           4 (Homeobox protein PBX4). - Canis familiaris
          Length = 393

 Score = 88.2 bits (209), Expect = 1e-16
 Identities = 40/50 (80%), Positives = 43/50 (86%)
 Frame = +3

Query: 363 RKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDNMLI 512
           RKH LNCHRMKPALFSVLCEIKEKTVLS+   QEE P + QLMRLDNML+
Sbjct: 1   RKHALNCHRMKPALFSVLCEIKEKTVLSIHGIQEEGPSNAQLMRLDNMLL 50


>UniRef50_P41779 Cluster: Homeobox protein ceh-20; n=26;
           Eumetazoa|Rep: Homeobox protein ceh-20 - Caenorhabditis
           elegans
          Length = 338

 Score = 88.2 bits (209), Expect = 1e-16
 Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
 Frame = +3

Query: 297 DIGEILQQIMNITDQSLDEAQ-ARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEP 473
           ++ E+L  ++ I +Q+LD+   A+K  L CH M+ ALF VLCE KEKTVL++RN  +E P
Sbjct: 8   NLSELLDAVLKINEQTLDDNDSAKKQELQCHPMRQALFDVLCETKEKTVLTVRNQVDETP 67

Query: 474 PDPQLMRLDNMLI 512
            DPQLMRLDNML+
Sbjct: 68  EDPQLMRLDNMLV 80


>UniRef50_UPI00015B54D8 Cluster: PREDICTED: similar to
           extradenticle; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to extradenticle - Nasonia vitripennis
          Length = 403

 Score = 84.2 bits (199), Expect = 2e-15
 Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 5/80 (6%)
 Frame = +3

Query: 288 RKQDIGEILQQIMNITDQSLDEAQAR----KHTLNCHRMKPALFSVLCEIKEKTVLSLRN 455
           R++DI E+LQQ+M+I  Q++D +       K  L  H + PALF+VLCE KEKT LSLR+
Sbjct: 53  RRKDINELLQQVMSIQTQTIDSSPVSVNESKWALYNHPLMPALFNVLCEFKEKTGLSLRH 112

Query: 456 TQEEE-PPDPQLMRLDNMLI 512
           T EE+  PD QLMRLDNMLI
Sbjct: 113 THEEDLQPDAQLMRLDNMLI 132


>UniRef50_Q4RVF5 Cluster: Chromosome 15 SCAF14992, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 15 SCAF14992, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 338

 Score = 49.2 bits (112), Expect = 7e-05
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +3

Query: 438 VLSLRNTQEEEPPDPQLMRLDNMLI 512
           VLS+R  QEEEPPDPQLMRLDNML+
Sbjct: 26  VLSIRGAQEEEPPDPQLMRLDNMLL 50


>UniRef50_UPI00015B54DA Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 386

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 9/82 (10%)
 Frame = +3

Query: 294 QDIGEILQQIMNIT-DQSLDE--AQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQ- 461
           Q + ++L+++  +  DQ + E   Q +K  LN HR+ P L +VLC++K+++       Q 
Sbjct: 58  QSLKKLLEELRKLPQDQDVTEPGTQEKKIALNNHRLFPILRNVLCDLKKESYGKRGQRQF 117

Query: 462 --EEEP---PDPQLMRLDNMLI 512
             +E+P   P+ QL+RLD MLI
Sbjct: 118 FADEKPENKPNEQLIRLDKMLI 139


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,907,154
Number of Sequences: 1657284
Number of extensions: 8179377
Number of successful extensions: 17130
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17128
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)