Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11i07f
(590 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33747-1|AAC46903.1| 376|Drosophila melanogaster extradenticle ... 154 1e-37
L19295-1|AAC37182.1| 376|Drosophila melanogaster extradenticle ... 154 1e-37
AY061065-1|AAL28613.1| 376|Drosophila melanogaster LD03509p pro... 154 1e-37
AE014298-2315|AAN09379.1| 376|Drosophila melanogaster CG8933-PC... 154 1e-37
AE014298-2314|AAF48556.1| 376|Drosophila melanogaster CG8933-PB... 154 1e-37
AE014298-2313|AAF48555.1| 376|Drosophila melanogaster CG8933-PA... 154 1e-37
Z18864-1|CAA79313.1| 365|Drosophila melanogaster Dpbx protein. 151 7e-37
AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesp... 30 2.7
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 30 2.7
AY328470-1|AAP93640.1| 332|Drosophila melanogaster nuclear migr... 29 3.6
AY071485-1|AAL49107.1| 332|Drosophila melanogaster RE55422p pro... 29 3.6
AE014296-2806|AAF49407.2| 332|Drosophila melanogaster CG9710-PA... 29 3.6
AY051681-1|AAK93105.1| 777|Drosophila melanogaster LD23102p pro... 28 8.2
AF035275-1|AAB87630.1| 777|Drosophila melanogaster zinc finger ... 28 8.2
AE014134-1687|AAF52805.2| 777|Drosophila melanogaster CG3998-PA... 28 8.2
>U33747-1|AAC46903.1| 376|Drosophila melanogaster extradenticle
protein.
Length = 376
Score = 154 bits (373), Expect = 1e-37
Identities = 79/113 (69%), Positives = 86/113 (76%), Gaps = 2/113 (1%)
Frame = +3
Query: 180 MDDPNRMMAHSXXXXXXXXXXXXXXXXXXXXXXXXX-RKQ-DIGEILQQIMNITDQSLDE 353
M+DPNRM+AH+ RKQ DIGEILQQIM+I++QSLDE
Sbjct: 1 MEDPNRMLAHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDE 60
Query: 354 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDNMLI 512
AQARKHTLNCHRMKPALFSVLCEIKEKTVLS+RNTQEEEPPDPQLMRLDNMLI
Sbjct: 61 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLI 113
>L19295-1|AAC37182.1| 376|Drosophila melanogaster extradenticle
protein.
Length = 376
Score = 154 bits (373), Expect = 1e-37
Identities = 79/113 (69%), Positives = 86/113 (76%), Gaps = 2/113 (1%)
Frame = +3
Query: 180 MDDPNRMMAHSXXXXXXXXXXXXXXXXXXXXXXXXX-RKQ-DIGEILQQIMNITDQSLDE 353
M+DPNRM+AH+ RKQ DIGEILQQIM+I++QSLDE
Sbjct: 1 MEDPNRMLAHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDE 60
Query: 354 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDNMLI 512
AQARKHTLNCHRMKPALFSVLCEIKEKTVLS+RNTQEEEPPDPQLMRLDNMLI
Sbjct: 61 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLI 113
>AY061065-1|AAL28613.1| 376|Drosophila melanogaster LD03509p
protein.
Length = 376
Score = 154 bits (373), Expect = 1e-37
Identities = 79/113 (69%), Positives = 86/113 (76%), Gaps = 2/113 (1%)
Frame = +3
Query: 180 MDDPNRMMAHSXXXXXXXXXXXXXXXXXXXXXXXXX-RKQ-DIGEILQQIMNITDQSLDE 353
M+DPNRM+AH+ RKQ DIGEILQQIM+I++QSLDE
Sbjct: 1 MEDPNRMLAHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDE 60
Query: 354 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDNMLI 512
AQARKHTLNCHRMKPALFSVLCEIKEKTVLS+RNTQEEEPPDPQLMRLDNMLI
Sbjct: 61 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLI 113
>AE014298-2315|AAN09379.1| 376|Drosophila melanogaster CG8933-PC,
isoform C protein.
Length = 376
Score = 154 bits (373), Expect = 1e-37
Identities = 79/113 (69%), Positives = 86/113 (76%), Gaps = 2/113 (1%)
Frame = +3
Query: 180 MDDPNRMMAHSXXXXXXXXXXXXXXXXXXXXXXXXX-RKQ-DIGEILQQIMNITDQSLDE 353
M+DPNRM+AH+ RKQ DIGEILQQIM+I++QSLDE
Sbjct: 1 MEDPNRMLAHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDE 60
Query: 354 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDNMLI 512
AQARKHTLNCHRMKPALFSVLCEIKEKTVLS+RNTQEEEPPDPQLMRLDNMLI
Sbjct: 61 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLI 113
>AE014298-2314|AAF48556.1| 376|Drosophila melanogaster CG8933-PB,
isoform B protein.
Length = 376
Score = 154 bits (373), Expect = 1e-37
Identities = 79/113 (69%), Positives = 86/113 (76%), Gaps = 2/113 (1%)
Frame = +3
Query: 180 MDDPNRMMAHSXXXXXXXXXXXXXXXXXXXXXXXXX-RKQ-DIGEILQQIMNITDQSLDE 353
M+DPNRM+AH+ RKQ DIGEILQQIM+I++QSLDE
Sbjct: 1 MEDPNRMLAHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDE 60
Query: 354 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDNMLI 512
AQARKHTLNCHRMKPALFSVLCEIKEKTVLS+RNTQEEEPPDPQLMRLDNMLI
Sbjct: 61 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLI 113
>AE014298-2313|AAF48555.1| 376|Drosophila melanogaster CG8933-PA,
isoform A protein.
Length = 376
Score = 154 bits (373), Expect = 1e-37
Identities = 79/113 (69%), Positives = 86/113 (76%), Gaps = 2/113 (1%)
Frame = +3
Query: 180 MDDPNRMMAHSXXXXXXXXXXXXXXXXXXXXXXXXX-RKQ-DIGEILQQIMNITDQSLDE 353
M+DPNRM+AH+ RKQ DIGEILQQIM+I++QSLDE
Sbjct: 1 MEDPNRMLAHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDE 60
Query: 354 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDNMLI 512
AQARKHTLNCHRMKPALFSVLCEIKEKTVLS+RNTQEEEPPDPQLMRLDNMLI
Sbjct: 61 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLI 113
>Z18864-1|CAA79313.1| 365|Drosophila melanogaster Dpbx protein.
Length = 365
Score = 151 bits (366), Expect = 7e-37
Identities = 78/113 (69%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
Frame = +3
Query: 180 MDDPNRMMAHSXXXXXXXXXXXXXXXXXXXXXXXXX-RKQ-DIGEILQQIMNITDQSLDE 353
M+DPNRM+AH+ RKQ DIGEILQQIM+I++QSLDE
Sbjct: 1 MEDPNRMLAHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDE 60
Query: 354 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEPPDPQLMRLDNMLI 512
AQARKHTLNCHRMKPALFSVLCEIKEKTVLS+RNTQE EPPDPQLMRLDNMLI
Sbjct: 61 AQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEGEPPDPQLMRLDNMLI 113
>AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesprin
splice variant protein.
Length = 400
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 294 QDIGEILQQIMNITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEP 473
Q++ E+LQ + ++ D + Q+ + H +K L E+ E+ + L+N ++ P
Sbjct: 252 QELDELLQSLSSVEDGIANMNQSSLDGM-LHGLK--LIQSNLEVHERDAIELKNQAKKLP 308
Query: 474 PDPQLMRLDN 503
DP RL N
Sbjct: 309 TDPATERLLN 318
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 294 QDIGEILQQIMNITDQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSLRNTQEEEP 473
Q++ E+LQ + ++ D + Q+ + H +K L E+ E+ + L+N ++ P
Sbjct: 7713 QELDELLQSLSSVEDGIANMNQSSLDGM-LHGLK--LIQSNLEVHERDAIELKNQAKKLP 7769
Query: 474 PDPQLMRLDN 503
DP RL N
Sbjct: 7770 TDPATERLLN 7779
>AY328470-1|AAP93640.1| 332|Drosophila melanogaster nuclear
migration protein NudC protein.
Length = 332
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 95 ISIGKPKFKVNVKNETPLVEYQL 27
ISIGK KV +K +TP+++ +L
Sbjct: 201 ISIGKKSLKVGIKGQTPIIDGEL 223
>AY071485-1|AAL49107.1| 332|Drosophila melanogaster RE55422p
protein.
Length = 332
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 95 ISIGKPKFKVNVKNETPLVEYQL 27
ISIGK KV +K +TP+++ +L
Sbjct: 201 ISIGKKSLKVGIKGQTPIIDGEL 223
>AE014296-2806|AAF49407.2| 332|Drosophila melanogaster CG9710-PA
protein.
Length = 332
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 95 ISIGKPKFKVNVKNETPLVEYQL 27
ISIGK KV +K +TP+++ +L
Sbjct: 201 ISIGKKSLKVGIKGQTPIIDGEL 223
>AY051681-1|AAK93105.1| 777|Drosophila melanogaster LD23102p
protein.
Length = 777
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 414 LCEIKEKTVLSLRNTQEEEPPDPQ 485
L E+ E+ VL LR Q E+PP P+
Sbjct: 320 LVEVAEEDVLELRGHQMEKPPGPR 343
>AF035275-1|AAB87630.1| 777|Drosophila melanogaster zinc finger 30C
protein.
Length = 777
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 414 LCEIKEKTVLSLRNTQEEEPPDPQ 485
L E+ E+ VL LR Q E+PP P+
Sbjct: 320 LVEVAEEDVLELRGHQMEKPPGPR 343
>AE014134-1687|AAF52805.2| 777|Drosophila melanogaster CG3998-PA
protein.
Length = 777
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 414 LCEIKEKTVLSLRNTQEEEPPDPQ 485
L E+ E+ VL LR Q E+PP P+
Sbjct: 320 LVEVAEEDVLELRGHQMEKPPGPR 343
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,841,030
Number of Sequences: 53049
Number of extensions: 380032
Number of successful extensions: 929
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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