Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11i06r
(738 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0674 - 21745321-21746223,21746229-21747608 34 0.14
12_02_0618 - 21262021-21262117,21262429-21262466,21262933-212629... 33 0.18
01_01_1143 - 9064210-9065682 33 0.18
03_02_0340 + 7635354-7635621,7635992-7636121,7636865-7636929,763... 33 0.24
02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133 32 0.55
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 30 2.2
02_01_0216 + 1427490-1427789 30 2.2
02_01_0214 + 1420112-1420402 30 2.2
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 29 2.9
07_03_1107 - 24024387-24024497,24025799-24026410 29 2.9
05_07_0228 - 28526885-28527046,28527151-28527241,28528315-285284... 29 2.9
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 29 3.9
06_01_0410 + 2928382-2930973 29 3.9
02_02_0249 - 8288401-8288787 29 3.9
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 3.9
11_06_0202 - 21184217-21184503,21184622-21184982 29 5.1
09_04_0108 + 14657020-14657193,14659040-14659355,14659728-146598... 29 5.1
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 29 5.1
07_03_0451 + 18340166-18340533,18340576-18341006,18343057-183431... 29 5.1
05_07_0323 + 29260608-29260836,29262242-29262513,29263349-292634... 29 5.1
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 29 5.1
05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107 29 5.1
04_04_0977 + 29851086-29851463,29852054-29852551,29853665-298537... 29 5.1
07_01_0479 + 3606663-3607448 28 6.7
05_07_0256 + 28713134-28713964 28 6.7
12_02_1219 + 27096477-27096590,27096704-27097078 28 8.9
11_07_0002 - 27171791-27172222 28 8.9
11_03_0067 - 9535565-9536157,9536446-9536757,9536948-9537212,953... 28 8.9
10_07_0116 - 13022648-13022701,13022781-13022835,13023050-130231... 28 8.9
10_02_0004 - 4055613-4055903 28 8.9
09_02_0279 + 6702517-6702948 28 8.9
04_03_0904 + 20717005-20718087 28 8.9
01_06_0036 + 25786530-25786756,25788000-25788076,25788538-257886... 28 8.9
01_05_0222 + 19462487-19462663,19462916-19462991,19463106-194631... 28 8.9
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 33.9 bits (74), Expect = 0.14
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 3/175 (1%)
Frame = -1
Query: 732 TTAPTEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPLASR 553
++ P+ PLS+ST T+ LSS +P L T TD + TT L++
Sbjct: 589 SSTPSTSPLSTSTSKTSSTPSTSPLSSSTIKIPTTARTGELSTPTDKIPTTTRAGDLSTA 648
Query: 552 MSVAPSATFWFGSSTMLEAIGTKCIXXXXXXXXXXXVMPDAKPVVAPHALQVWTPPDHSG 373
S P+A ST I + + + +V +P +G
Sbjct: 649 TSKIPTAPGTSELSTTTSKISSTSCAGQFSTSTYGIPTTTCTSKLTASSCKVSSP---TG 705
Query: 372 EETLTHSTAMLVITSNASTRTGVLLVF-STPAVMPTSTR--MAAGTPNPDAGSTP 217
+ ST+ TS ++ T F +T ++PT+T +A+ T A S+P
Sbjct: 706 ACKFSTSTSTFTPTSFSNDLTASTSTFPTTTRLIPTATSRPIASATGTIVASSSP 760
>12_02_0618 -
21262021-21262117,21262429-21262466,21262933-21262986,
21263274-21263438,21263523-21263759,21263857-21263918,
21264543-21264656,21264816-21264942,21266200-21266218,
21266338-21266428,21266932-21267094,21267182-21267330,
21268147-21268287,21268368-21268533,21268568-21268631,
21268729-21269084,21269759-21269977,21270328-21270433,
21270713-21270942
Length = 865
Score = 33.5 bits (73), Expect = 0.18
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Frame = -3
Query: 433 RQAGGRPARVTGLDPAGPQWGGNSNALNRNAGHYVECIHTDGRALGIFNPSGDA-DFYPN 257
RQA G+ TG+ ++ +N+L+ I L + SGD +F+P
Sbjct: 518 RQAMGQFEHFTGMPVVDCKFRALANSLDNPDAMKAAGITAHKARLWLHERSGDLIEFHPR 577
Query: 256 GGRNPQPGCRINTCSHGRATELMASSVRTNHLVGRRCGNI-WEAELSNCNGGTLHMGNGN 80
GR QPG G + +A++ H + G++ + + G+ +G N
Sbjct: 578 SGRGMQPGHGGALYHFGTSGAAVAAATAVTHPLA--LGSVRYSSSSVGLGNGSKEIGLQN 635
Query: 79 FGKRGSGL 56
+G SGL
Sbjct: 636 WGADDSGL 643
>01_01_1143 - 9064210-9065682
Length = 490
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 565 AGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGRPARVTGLDPA 386
AG P V ALG L ++ + GG +++G + N G AG + + G+ A
Sbjct: 403 AGGPGVNPALGQALTAILASQGGGLGLNNILGVGANGSGLPNPGASAGLGSSGLPGMPGA 462
Query: 385 GPQWGG 368
G GG
Sbjct: 463 GGYLGG 468
>03_02_0340 +
7635354-7635621,7635992-7636121,7636865-7636929,
7637255-7637529,7640204-7640441,7641095-7641228,
7641340-7641414,7641675-7641776,7642154-7642263,
7642334-7642430
Length = 497
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 386 GGVQTCNAC-GATTGLASGITNDVST*TEANKMHLVPIASSIVDEPNQKVAEGATDIR 556
GGV+ AC A G + V+ ++ +HLVPI+ S D ++ V G TD+R
Sbjct: 235 GGVRVDGACEAAVNGCTGKMGLSVAEAVTSSGLHLVPISFSSRDTLDRTVRVGHTDVR 292
>02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133
Length = 474
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -1
Query: 384 DHSGEETLTHSTAMLVITSNASTRTGVLLVFSTPAVMPTS---TRMAAGTPNPDAGSTP 217
D +G++T+ H+TA+ + + AS+ + + P+V+P + R + P DA S P
Sbjct: 129 DGTGKDTIEHATALGGLKATASSDVAPVPIDDVPSVVPAANAPVRSSPVMPAADAASAP 187
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +3
Query: 306 RPSVWMHST**PALRLSALEFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCT 485
RP + +H T P L + + PP P S T PPA P +PT AP T
Sbjct: 262 RPLLLLHCTLAPHLCVPRVLSPP--APMPSALATHVPTPPAPAPPVPTPLAP-------T 312
Query: 486 WFQLPPALLMSQT 524
+PP MS T
Sbjct: 313 PADVPPGFTMSPT 325
>02_01_0216 + 1427490-1427789
Length = 99
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 149 ASSNQVVSTNTGCH*FSGATV*AGVDPASGLGVPAAIRVEVGITAGV 289
AS++ V G GA V AG D A G+G AA G+ AG+
Sbjct: 27 ASAHVGVGAGAGADAGVGAAVGAGADAALGVGAGAAGAAGAGVGAGI 73
>02_01_0214 + 1420112-1420402
Length = 96
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 149 ASSNQVVSTNTGCH*FSGATV*AGVDPASGLGVPAAIRVEVGITAGV 289
AS++ V G GA V AG D A G+G AA G+ AG+
Sbjct: 24 ASAHVGVGAGAGADAGVGAAVGAGADAALGVGANAAGAAGAGVGAGI 70
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 253 GRNPQPGCRINTCSHGRATELMASSVRTNHL 161
G++ +PGC +NTC+H RA L SV +
Sbjct: 264 GKDGRPGCVMNTCAH-RACPLHLGSVNEGRI 293
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = +3
Query: 372 PHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCTWFQLPPALLMSQTKKLPRARPT 551
P P + P A PPA P P T AP P + PP P+A
Sbjct: 46 PAAAPTTTTPPA-ASTPPAAAPTTPATPAPAEAPTTPAPTKAPPTKSTKAPAPAPKAAKA 104
Query: 552 SGTPAAA 572
+ PA++
Sbjct: 105 TPPPASS 111
>05_07_0228 -
28526885-28527046,28527151-28527241,28528315-28528455,
28528560-28528625,28529180-28529317,28529759-28529860,
28530156-28530236,28530314-28530383,28530598-28530674,
28531035-28531483
Length = 458
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -3
Query: 595 LANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGR 416
+ N T + V D + +F+ + GG+ NQ++L+G S GAH+ A + +
Sbjct: 225 IGNFPQGTISDMVSDASDGI-SFVCETVGAYGGDPNQIYLMGQSAGAHIAACALLEQAAK 283
Query: 415 PAR 407
+R
Sbjct: 284 ESR 286
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 29.1 bits (62), Expect = 3.9
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 1/104 (0%)
Frame = -3
Query: 346 NAGHYVECIHTDGRALGIFNPSGDADFYPNGGRNPQPGCRINTCS-HGRATELMASSVRT 170
N G Y H G G SG A NGG G +CS G + + +S+
Sbjct: 74 NGGSYTASGHGLGLGSGYGYGSGSAYGAGNGGSASGCGSGSTSCSGSGSGSVGLGTSINV 133
Query: 169 NHLVGRRCGNIWEAELSNCNGGTLHMGNGNFGKRGSGLYGLRTR 38
VG G ++ +G G+ GSG R+R
Sbjct: 134 GVGVGANGGTNGGSDCDTGSGSNYGSSTGSSSGYGSGGVSYRSR 177
>06_01_0410 + 2928382-2930973
Length = 863
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 354 SALEFPPHCGPAGSKPVTRAGRPPA--WRPALP 446
S LE P HC GS V RA PP WR A+P
Sbjct: 365 STLEVPYHCFVLGS--VCRASSPPVPLWRVAVP 395
>02_02_0249 - 8288401-8288787
Length = 128
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = -2
Query: 440 CRTP-SRWSPRTRYRFGPRRTTVGRKL*RTQPQCWSLRRMHPHGRACSWYFQPQR*CRLL 264
CR P S + R TT + PQ W LRR P W+ +R R +
Sbjct: 14 CRAPWINSSGLGKRRIDDGHTTGSSRFDGCAPQEWRLRR--PQSPGTKWWIDRRRHAREV 71
Query: 263 PEWRQEPPTRMPDQHLLTRSR 201
W+ + R D+ + + R
Sbjct: 72 ANWQSKRCARGGDESTIQQPR 92
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.1 bits (62), Expect = 3.9
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +3
Query: 369 PPHCGPAGSKPVTRAGRPPAWRPALPTT*AP-KLKPIRCTWFQLPPALLMS-----QTKK 530
PP P+ S T + PPA RPALP T AP + P T QL PA S +
Sbjct: 138 PPAKAPSHSHAKTPS-MPPAERPALPPTKAPAAISP--ATPPQLSPANAHSTHHHAKPPS 194
Query: 531 LPRARPTSGTPA 566
LP A P +P+
Sbjct: 195 LPPAEPPVPSPS 206
Score = 29.1 bits (62), Expect = 3.9
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +3
Query: 363 EFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APK---LKPIRCTWFQLPPALLMSQTKKL 533
E PP P+ A P A RPA+P PK + P++ Q PPA
Sbjct: 208 EHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAPVQPP--QRPPAPATKPPPSF 265
Query: 534 -PRARPTSGTPAAA 572
P+ PT PA A
Sbjct: 266 PPQLAPTMPPPAHA 279
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/79 (27%), Positives = 28/79 (35%)
Frame = +3
Query: 339 PALRLSALEFPPHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCTWFQLPPALLMS 518
P S+ + PP G P + P P+LP P P + LPP
Sbjct: 127 PPYEPSSPQQPPSAGKLAESPAATPAQSPTAAPSLPQAPKPSSPPPFTSPSPLPPPPPPP 186
Query: 519 QTKKLPRARPTSGTPAAAV 575
+ A GT AAAV
Sbjct: 187 TSHGARGATMGIGTVAAAV 205
>09_04_0108 +
14657020-14657193,14659040-14659355,14659728-14659887,
14661265-14661725,14663778-14663856,14664732-14664882,
14665414-14665467,14665724-14665888
Length = 519
Score = 28.7 bits (61), Expect = 5.1
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = -3
Query: 613 VVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINN----AGGNWNQVHLIGFSLGAHVV 446
+VDW L S+ + DV + NFLV LIN+ +V ++G G H
Sbjct: 124 IVDWPGLGYSDRPSLNYNA-DV---MENFLVQLINSPNSPVANTDGEVVVVG---GGHAA 176
Query: 445 GNAGRQAGGRPARVTGLDPAGPQWGG 368
A R AG R +G+ P W G
Sbjct: 177 TIAVRAAGKGLIRPSGIAAVAPTWAG 202
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 504 ALLMSQTKKL-PRARPTSGTPAAAVL*FELASLCQSTTMT 620
+L+ S T+ L P+A PTS AA V +L SLC T
Sbjct: 527 SLISSNTENLSPQALPTSSESAAGVTIDDLRSLCSQEFFT 566
>07_03_0451 +
18340166-18340533,18340576-18341006,18343057-18343184,
18343329-18343958,18344761-18345480
Length = 758
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 228 GSTPAHTVAPLN*WHPVFVLTTWLED 151
GSTP H A L W V +L+ W D
Sbjct: 342 GSTPLHLAASLEGWPYVGILSKWFPD 367
>05_07_0323 +
29260608-29260836,29262242-29262513,29263349-29263487,
29263581-29263714,29263847-29263970,29264364-29264773
Length = 435
Score = 28.7 bits (61), Expect = 5.1
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Frame = -3
Query: 532 NFLVWLINNAGGNWNQVH-LIGFSLGAHVVGNAGRQAGGRPAR-VTGLDPAGPQWGGNSN 359
N + W NNA N +H LI LG++ AG Q R AR T +P
Sbjct: 307 NLVEWAHNNA--NDRSIHRLIDPGLGSNF-SMAGAQILARTARSCTRQNP-------RDR 356
Query: 358 ALNRNAGHYVECIHTDGRALGIFNPSGDADFYPNGGRNPQP 236
L H +E +HTD RA + S P+ NP P
Sbjct: 357 PLMSEVVHTLETLHTDQRANATTSYSYSQSQPPSPSANPSP 397
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = +2
Query: 251 AAIR--VEVGITAGVENTKSTPVRVDAFDV-MTSIAVECVRVSSPLWSGGVQTCN--ACG 415
A+IR V V A V K RV A + + + C SS L +GG C C
Sbjct: 2 ASIRSCVSVNPAAAVTPVKYKSARVGAAGLDPKGLRISCSSSSSSLAAGGGDGCRDAGCA 61
Query: 416 ATTGLASGITNDV 454
+++G SG+ V
Sbjct: 62 SSSGRGSGVVGSV 74
>05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107
Length = 151
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +2
Query: 350 VECVRVSSPLWSGGV----QTCNACG 415
VEC ++P+W GG CNACG
Sbjct: 28 VECGATTTPMWRGGPTGPRSLCNACG 53
>04_04_0977 +
29851086-29851463,29852054-29852551,29853665-29853754,
29854369-29854491
Length = 362
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 603 GTDLLIQTTILPPLASRMSVAPSATFWFGSSTMLEAIGTK 484
G D+LI T A+ +V P A+F FG++ A GT+
Sbjct: 10 GGDVLIYDTFNASAAAAAAVVPPASFLFGNNNAGGAAGTE 49
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 369 PPHCGPAGSKPVTRAGRPPAWRPALP 446
PP GP +P G PP RP +P
Sbjct: 212 PPPMGPPQVRPGMPGGPPPGMRPGMP 237
>05_07_0256 + 28713134-28713964
Length = 276
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 303 LLVFSTPAVMPTSTRMAAGTPNPDAGSTPAHTVAPLN*WHPVFVL 169
L + S T+ A + + AGSTPA T AP P+F++
Sbjct: 76 LSISSNHGTTTTAAAAAVSSDSAGAGSTPASTTAPPAASFPLFIV 120
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = -3
Query: 196 ELMASSVRTNHLVGRRCGNIWEAELSNCNGGTLHMGNGNFGKRGSGLYGLRTRNAW 29
EL ++ N RR G GG + G G +G G G YG R +
Sbjct: 73 ELDGRNITVNEAQSRRSGGGGGGGYGQRGGGGGYGGGGGYGGGGGGGYGQRREGGY 128
>11_07_0002 - 27171791-27172222
Length = 143
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 390 PPDHSGEETLTHSTAMLVI-TSNASTRTGVLLVFSTPAVMPTSTRMAAGTPNPDAGSTP 217
PP SG T T + T +++ T STPA + S A G+P +GSTP
Sbjct: 34 PPSSSGARTPTSGGSPGGSGTRSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTP 92
>11_03_0067 -
9535565-9536157,9536446-9536757,9536948-9537212,
9537810-9538048,9538400-9538568,9539216-9539410,
9539649-9539766,9542140-9542315
Length = 688
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 505 AGGNWNQVHLIGFSLGAHVVGNAGRQAGGRPAR 407
AGG W + H G ++ GN GR GG+ AR
Sbjct: 2 AGGRWIR-H--GMAMSVVATGNCGRSVGGQEAR 31
>10_07_0116 -
13022648-13022701,13022781-13022835,13023050-13023175,
13023274-13023340,13024104-13024200,13024362-13024461,
13024527-13024611,13024679-13024755,13024888-13024926,
13025001-13025038,13025118-13025208,13025536-13025628,
13025726-13025781,13025844-13025915,13026078-13026134,
13026397-13026495,13026599-13026964
Length = 523
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = -1
Query: 441 MPDAKPVVAPHALQVWTPPD---HSGEETLTHSTAMLVITSNASTR---TGVLLVFSTPA 280
M D + + H PD ++ +TH VI S ++ R T VLL+ S P
Sbjct: 1 MADVEACLLAHLNSGGEVPDSRSYASSLRVTHDELEAVIKSLSAFRIVDTTVLLLPSPPL 60
Query: 279 VMPTSTRMAAGTPNPDAGSTP 217
P S ++ G PNP+ S P
Sbjct: 61 SSP-SPNLSPGLPNPNELSAP 80
>10_02_0004 - 4055613-4055903
Length = 96
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 275 CRLLPEWRQEPPTRMPDQHLL 213
C LLP RQ PPT P + LL
Sbjct: 14 CPLLPHRRQRPPTAPPRRRLL 34
>09_02_0279 + 6702517-6702948
Length = 143
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 390 PPDHSGEETLTHSTAMLVI-TSNASTRTGVLLVFSTPAVMPTSTRMAAGTPNPDAGSTP 217
PP SG T T + T +++ T STPA + S A G+P +GSTP
Sbjct: 34 PPSSSGARTPTSGGSPGGSGTRSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTP 92
>04_03_0904 + 20717005-20718087
Length = 360
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Frame = +3
Query: 369 PPHCGPAGSKPVTRAGRPPAWRPALPT------T*APKLKPIRCTWFQLPPALLMSQTKK 530
P H P KP + +PPA+ P PT T PK P T PPA +
Sbjct: 54 PHHHEPKPEKP-PKEHKPPAYTPPKPTPTPPTYTPTPKPTPPPYTPKPTPPAHTPTPPTY 112
Query: 531 LPRARPTSGTP 563
P P TP
Sbjct: 113 TPTPTPPKPTP 123
>01_06_0036 +
25786530-25786756,25788000-25788076,25788538-25788625,
25788706-25788786,25788866-25788940,25789048-25789149,
25789589-25789726,25791559-25791585,25791696-25791786,
25792423-25792584
Length = 355
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -3
Query: 640 LAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSL 461
LA + + V +D+ N T V D + + +++ I + GG+ N+++L+G S
Sbjct: 170 LAERGIIVACIDYR---NFPQGTIGDMVSDASQGI-SYVCNNIASYGGDPNRIYLVGQSA 225
Query: 460 GAHVVGNA 437
GAH+ A
Sbjct: 226 GAHIAACA 233
>01_05_0222 +
19462487-19462663,19462916-19462991,19463106-19463185,
19463293-19463342,19463436-19463520,19463640-19463738,
19464110-19464346
Length = 267
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 553 DVGRALGNFLVWLINNAGGNWNQVHL 476
D+G G FL+WL N+G N + L
Sbjct: 81 DIGCGSGRFLIWLAKNSGERRNYLGL 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,830,948
Number of Sequences: 37544
Number of extensions: 651042
Number of successful extensions: 2407
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 2233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2399
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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