Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i05r
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    29   0.036
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       27   0.15 
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   1.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.8  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.7  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 29.1 bits (62), Expect = 0.036
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -3

Query: 644 EVKRGTFTPLKSLKVLHLCHNRNLRY-ISHNAFRGLKDKWTLKEVYLDDNNLSEL 483
           ++  GTF  +  L  L+L HN  L   I+  +F+GL  ++TL  + LD+ +LS++
Sbjct: 408 QIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQGL--EYTLLHLNLDNVSLSQV 460



 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 446 LGMTGNSWLCNCDL 405
           L + G  W C+CDL
Sbjct: 701 LKLMGGKWSCDCDL 714


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -2

Query: 219 CSMDNPCRCNGSCVWHDLGTSC*C 148
           CS  NPCR NGSCV       C C
Sbjct: 110 CS-PNPCRNNGSCVDRIADFECNC 132



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -2

Query: 207 NPCRCNGSCVWHDLGTSC*CNQ 142
           NPC   G+CV       C C +
Sbjct: 75  NPCENGGTCVDKINAFQCICKE 96


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 527 TLKEVYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVN 390
           TL + Y    +L  LS  L+P S +  L  +  S LCN    N  N
Sbjct: 176 TLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTN 221


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 527 TLKEVYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVN 390
           TL + Y    +L  LS  L+P S +  L  +  S LCN    N  N
Sbjct: 336 TLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTN 381


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 527 TLKEVYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVN 390
           TL + Y    +L  LS  L+P S +  L  +  S LCN    N  N
Sbjct: 336 TLSDRYKVFVDLFNLSTFLIPRSYIPPLSTSMRSHLCNWGSANSTN 381


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -1

Query: 436 LVIAGCVIVIWSTLLINRVLVISSSLMKSLIVLLL*D*VENTLQILLSTFVQC*TRHFHL 257
           LV+A    ++W+  +I  VL  +  +   LIV +L      T  I    +V C   +F++
Sbjct: 110 LVVANAFFLLWTPAVIFVVLSKNGIVFAGLIVFILFFAQGLTSPIFNLVYVYCCDNNFNV 169


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 413 NYTASYYQSSREHPVCSMA*DQETTHLNYCHL 508
           NY A  Y S   H  C++   Q+ +++  C L
Sbjct: 137 NYPAVPYGSGDFHDSCTVNNYQDASNVRNCEL 168


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 413 NYTASYYQSSREHPVCSMA*DQETTHLNYCHL 508
           NY A  Y S   H  C++   Q+ +++  C L
Sbjct: 138 NYPAVPYGSGDFHDSCTVNNYQDASNVRNCEL 169


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 413 NYTASYYQSSREHPVCSMA*DQETTHLNYCHL 508
           NY A  Y S   H  C++   Q+ +++  C L
Sbjct: 138 NYPAVPYGSGDFHDSCTVNNYQDASNVRNCEL 169


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +1

Query: 463 HGIRSGDNSLKLLSSRYTSFKVHLSFSPLKAL*LIYR 573
           HG+  GD     L   Y +F   L FS L     I+R
Sbjct: 304 HGLLQGDPLSGCLCELYMAFMDRLYFSNLDKDAFIHR 340


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 576 VAIVT*MQDLQAFQRCECAPFNFVXII 656
           V +V  +  + AFQ   C   NFV +I
Sbjct: 144 VKVVREINGIFAFQVLMCTSMNFVLLI 170


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 141 LDCINKKSQDHAKRSYHCNGKDCP 212
           LD  +  ++D  K+   CN   CP
Sbjct: 471 LDATSYYAKDLEKQRQQCNQNKCP 494


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,035
Number of Sequences: 336
Number of extensions: 3524
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)