Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11i05r
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13) 44 9e-05
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 36 0.024
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 34 0.096
SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06) 31 0.68
SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_24472| Best HMM Match : I-set (HMM E-Value=0) 31 1.2
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 30 2.1
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 30 2.1
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053) 29 2.7
SB_9976| Best HMM Match : PIP5K (HMM E-Value=2) 29 2.7
SB_5704| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_786| Best HMM Match : EGF (HMM E-Value=0) 29 3.6
SB_41271| Best HMM Match : EGF (HMM E-Value=1.2e-20) 29 4.8
SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_27016| Best HMM Match : NUDIX (HMM E-Value=1.4e-16) 28 6.3
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074) 28 8.4
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_46360| Best HMM Match : EGF (HMM E-Value=0) 28 8.4
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 28 8.4
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 28 8.4
>SB_14995| Best HMM Match : LRR_1 (HMM E-Value=4e-13)
Length = 188
Score = 44.4 bits (100), Expect = 9e-05
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = -3
Query: 611 SLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGMTG 432
++ VL L H+ NL +SH+ F+ + K L+EVYLD N L +L L L VLG++
Sbjct: 56 NMSVLELRHS-NLTTVSHDLFKSKEGK-ALEEVYLDANQLRDLPRGLFNLQNLQVLGLSD 113
Query: 431 NS-WLCNCDLVNIVN 390
N + L N+VN
Sbjct: 114 NELTILPSVLSNLVN 128
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 36.3 bits (80), Expect = 0.024
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = -3
Query: 695 GLSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNL-RYISHNAFRGL 540
GL ++ +L++ ND + RG F PLKSL+ L L NRN+ I AF GL
Sbjct: 139 GLVSLEKLDLRFNDLK-ALPRGVFKPLKSLRELFLHDNRNMGSRIEEGAFNGL 190
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -3
Query: 569 YISHNAFRGLKDKWT----LKEVYLDDNNLSELSPDLMPWSKLDVLGMTGN 429
Y++ N L D + L E++L++N+L EL L SKL VL +TGN
Sbjct: 69 YLTGNLLTSLPDVFARLGNLTELHLNENSLEELPESLGKLSKLRVLNLTGN 119
Score = 33.9 bits (74), Expect = 0.13
Identities = 29/88 (32%), Positives = 45/88 (51%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEV 513
L N+ EL + EN +E+ + L L+VL+L N+ L + + GL +L E+
Sbjct: 85 LGNLTELHLNENSL-EELPE-SLGKLSKLRVLNLTGNK-LEKLRDDFGAGLA---SLTEL 138
Query: 512 YLDDNNLSELSPDLMPWSKLDVLGMTGN 429
+D+N+LSELS L VL + N
Sbjct: 139 RIDENDLSELSVSFTLMKNLKVLELGDN 166
>SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -3
Query: 602 VLHLCHNRNLRYISHNAFRGLK----DKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGMT 435
+ LC+ R+L +S N R L D TL+E+ L +N L L +L +L LG++
Sbjct: 70 ISRLCNLRHLD-VSSNKLRSLPAEMGDLVTLRELLLSNNGLRVLPNELGKLFQLQTLGLS 128
Query: 434 GN 429
GN
Sbjct: 129 GN 130
>SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06)
Length = 335
Score = 31.5 bits (68), Expect = 0.68
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 225 KTCSMDNPCRCNGSCVWHDLGTSC*C 148
KT +N C+ NG+C W+D C C
Sbjct: 29 KTLCEENGCQNNGTCFWNDTDYGCMC 54
>SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 31.1 bits (67), Expect = 0.90
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Frame = -3
Query: 578 NLRYISHNAFRGLKDK----WTLKEVYLDDNNLSELSPDLMPWSK-------LDVLGMTG 432
N R +S NA R + + LK + L N ++ ++ + P + + + + G
Sbjct: 9 NFRNLSRNALRSISSRAFSRHALKWIDLSHNKMTAINREAFPSDQQLKQSAAIGGVYLHG 68
Query: 431 NSWLCNCDLVNIVNKQGAGDKFKSDEVPYCAAPMRLSGEYITNI 300
N W C C+L +V+ G + CA P L G+ + +
Sbjct: 69 NPWDCTCNLQWLVDALQTGMLKSLGKSAECATPELLRGKALMEL 112
>SB_24472| Best HMM Match : I-set (HMM E-Value=0)
Length = 473
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -3
Query: 500 NNLSELSP-DLMPWSKLDVLGMTGNSWLCNCDLVNIVNKQGAGDKFKSDEVPYCAAPMRL 324
NN+SE+ DL L L + N +CNCDL+ + ++ C P L
Sbjct: 25 NNISEVKRGDLAGLHYLTTLRLDSNELVCNCDLLWLSKLLRRTP--NTETAATCHEPAEL 82
Query: 323 SGEYITNIT 297
SG I +T
Sbjct: 83 SGRAIVRLT 91
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -3
Query: 536 DKWT-LKEVYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVNKQGAGDKFKS 360
DK T LK+VY DN++S++ +L ++L VL + N+ DL N+V+
Sbjct: 57 DKCTNLKKVYFYDNHISKIE-NLSSLTRLTVLWLNNNNIQAIEDLTNLVHLPHLKSLSLK 115
Query: 359 DEVPYCAAPMRLSGEYITNI 300
D Y P+ L Y T++
Sbjct: 116 DPT-YGPNPVSLLCNYATHL 134
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 29.9 bits (64), Expect = 2.1
Identities = 34/130 (26%), Positives = 57/130 (43%)
Frame = -3
Query: 695 GLSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKE 516
G SNV L + +ND +E+ + + LKSL L+L +N+ LR KW
Sbjct: 48 GFSNVKNLTLADNDL-EEIGNASLSGLKSLLYLNLANNK-LR------------KW---- 89
Query: 515 VYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVNKQGAGDKFKSDEVPYCAA 336
+ NLS +P+L + + +TGN WL + +++ + + G +D C
Sbjct: 90 ----NGNLSVNTPEL------ETINVTGNYWLPSNNVLELKYLRDIGGVTWTDNCAECCL 139
Query: 335 PMRLSGEYIT 306
S +T
Sbjct: 140 SKETSQNSVT 149
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -3
Query: 662 ENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSEL 483
EN++ + ++ GTF L L+L +N+ L I+ GL+D L+ + L N ++ L
Sbjct: 92 ENNFMEVIENGTFLRQALLDELYLGYNK-LERITRGTLEGLRD---LQRLRLSKNTITRL 147
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = -3
Query: 662 ENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLS 489
E + ++ TF L +LKVL+L +NR + +IS +F L+ +L+ + L +N++S
Sbjct: 140 ERNRLSHIQDTTFKHLLALKVLNLANNR-IYHISQGSFSDLR---SLEGLDLSNNDIS 193
>SB_32510| Best HMM Match : LRR_1 (HMM E-Value=0.0053)
Length = 377
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -3
Query: 614 KSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGMT 435
+S +C R I + A + + L EVYL DN L E++ L + L+VL +
Sbjct: 138 RSYTACKICRKSWKRMICY-ALGCFQSNFYLTEVYLQDNMLIEVNGLLRHLTCLEVLMLN 196
Query: 434 GNSWLCNCDLVN 399
GN D+V+
Sbjct: 197 GNQLTKLTDVVH 208
>SB_9976| Best HMM Match : PIP5K (HMM E-Value=2)
Length = 673
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 385 CLLTMLTRSQLHSQLLPVIPRTSSLLHGIRSGDNSLKLLSSRY 513
CLL + +H Q++ + P L I +GD+ K SR+
Sbjct: 563 CLLAKVESLPIHDQIVTITPEEDIKLSRIANGDDQTKQQKSRF 605
>SB_5704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2061
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 385 CLLTMLTRSQLHSQLLPVIPRTSSLLHGIRSGDNSLKLLSSRY 513
CLL + +H Q++ + P L I +GD+ K SR+
Sbjct: 1473 CLLAKVESLPIHDQIVTITPEEDIKLSRIANGDDQTKQQKSRF 1515
>SB_786| Best HMM Match : EGF (HMM E-Value=0)
Length = 1427
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 219 CSMDNPCRCNGSCVWHDLGTSC*CNQE 139
CS NPC+ NG CV +G C C ++
Sbjct: 201 CS-PNPCKNNGVCVSRGVGYHCKCKRD 226
>SB_41271| Best HMM Match : EGF (HMM E-Value=1.2e-20)
Length = 169
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 207 NPCRCNGSCVWHDLGTSC*CNQE 139
NPCR GSC D G C C E
Sbjct: 8 NPCRNGGSCTEVDDGFECACQAE 30
>SB_51779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3610
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 231 EAKTCSMDNPCRCNGSCVWHDL 166
E K CS NPC NG C HD+
Sbjct: 2674 EPKNCSSSNPCLNNGIC--HDI 2693
>SB_27016| Best HMM Match : NUDIX (HMM E-Value=1.4e-16)
Length = 454
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -3
Query: 182 AFGMILGLLVNAIKKVYKTRFQSQPIHYININSDS 78
A GM L +LVN V K S+ H+IN++SDS
Sbjct: 404 ADGMCLSVLVN----VKKCNLVSEKFHWINVSSDS 434
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 28.3 bits (60), Expect = 6.3
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = -3
Query: 695 GLSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKE 516
GL+ + L + N+ +R T SLK L L +N L I FR L+ L+
Sbjct: 162 GLAALQRLRLHNNNLKTFSER-TLQGTLSLKSLQL-NNNLLTRIEPGTFRNLRG---LEI 216
Query: 515 VYLDDNNLSELSPDL 471
+YL++NN++EL L
Sbjct: 217 LYLNNNNITELDQRL 231
>SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074)
Length = 180
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -3
Query: 626 FTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTL 522
F L +L+++ L N ++ IS NAF+GLK TL
Sbjct: 147 FQQLPNLEIMRLPEN-GIKRISVNAFKGLKSLTTL 180
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 11/40 (27%)
Frame = -2
Query: 222 TCSMDNPCR-----CNGSCV------WHDLGTSC*CNQES 136
+CS DN C C G+C WH T CNQES
Sbjct: 20 SCSTDNECSAFEHCCKGNCTAKRIHCWHVCSTDHECNQES 59
>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
Length = 352
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 204 PCRCNGSCVWHDLGTSC*C 148
PCR NGSCV G C C
Sbjct: 207 PCRNNGSCVLTQSGYQCLC 225
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = -3
Query: 623 TPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVL 444
T L +L++L +C S + G+ +L E+YL N++S++SP M L VL
Sbjct: 753 TCLTNLRMLWMCR------CSLSDLDGISSLSSLAELYLAFNDISDVSPVSM-LDNLQVL 805
Query: 443 GMTGN 429
+ GN
Sbjct: 806 DLEGN 810
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 219 CSMDNPCRCNGSCVWHDLGTSC*C 148
CS NPCR G CV G SC C
Sbjct: 1646 CS-SNPCRSRGQCVDRLKGYSCNC 1668
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 204 PCRCNGSCVWHDLGTSC*C 148
PCR NGSCV G C C
Sbjct: 1020 PCRNNGSCVLTQSGYQCLC 1038
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,629,260
Number of Sequences: 59808
Number of extensions: 434559
Number of successful extensions: 1289
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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