Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11i05r
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g23750.1 68416.m02986 leucine-rich repeat family protein / pr... 42 4e-04
At4g03260.1 68417.m00445 leucine-rich repeat family protein cont... 32 0.42
At3g17840.1 68416.m02274 leucine-rich repeat transmembrane prote... 31 0.56
At3g15410.1 68416.m01955 leucine-rich repeat family protein cont... 31 0.73
At4g28490.1 68417.m04076 leucine-rich repeat transmembrane prote... 31 0.97
At5g49780.1 68418.m06165 leucine-rich repeat transmembrane prote... 30 1.3
At4g31250.1 68417.m04436 leucine-rich repeat transmembrane prote... 30 1.3
At2g15320.1 68415.m01747 leucine-rich repeat family protein cont... 30 1.3
At1g74200.1 68414.m08594 leucine-rich repeat family protein cont... 30 1.3
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.7
At5g40640.1 68418.m04933 expressed protein 30 1.7
At1g65380.1 68414.m07417 receptor-like protein CLAVATA2 (CLV2) i... 30 1.7
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 29 2.2
At4g08850.2 68417.m01455 leucine-rich repeat family protein / pr... 29 3.9
At4g08850.1 68417.m01454 leucine-rich repeat family protein / pr... 29 3.9
At1g72180.1 68414.m08346 leucine-rich repeat transmembrane prote... 28 5.2
At5g27060.1 68418.m03229 disease resistance family protein conta... 28 6.8
At1g17230.1 68414.m02099 leucine-rich repeat family protein / pr... 28 6.8
At5g62230.1 68418.m07814 leucine-rich repeat family protein / pr... 27 9.0
At5g45510.1 68418.m05590 leucine-rich repeat family protein cont... 27 9.0
At5g15680.1 68418.m01834 expressed protein 27 9.0
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 27 9.0
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 27 9.0
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 27 9.0
At1g54480.1 68414.m06214 leucine-rich repeat family protein cont... 27 9.0
>At3g23750.1 68416.m02986 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 928
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEV 513
LS++ E+ + EN++ V+ G F L SL++L L N N+ S + L D +L +
Sbjct: 107 LSSLQEIYMDENNFVG-VETGAFAGLTSLQILSLSDNNNITTWSFPS--ELVDSTSLTTI 163
Query: 512 YLDDNNLSELSPDL 471
YLD+ N++ + PD+
Sbjct: 164 YLDNTNIAGVLPDI 177
>At4g03260.1 68417.m00445 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 677
Score = 31.9 bits (69), Expect = 0.42
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = -3
Query: 617 LKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGM 438
L L+VL L +NR LR + H GL +LKE+YL N +SE+ L KL VL +
Sbjct: 462 LTRLRVLDLSYNRILR-LGH----GLASCSSLKELYLAGNKISEIE-GLHRLLKLTVLDL 515
Query: 437 TGNSW 423
N +
Sbjct: 516 RFNKF 520
>At3g17840.1 68416.m02274 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GB:AAA33715
from [Petunia integrifolia]
Length = 647
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNR 579
LSN++ L + EN++ E+ G F L LK L+L +N+
Sbjct: 142 LSNLVRLNLAENEFSGEISSG-FKNLTRLKTLYLENNK 178
>At3g15410.1 68416.m01955 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596;
identical to leucine-rich repeat protein [Arabidopsis
thaliana] gi|2760084|emb|CAA76000
Length = 584
Score = 31.1 bits (67), Expect = 0.73
Identities = 25/89 (28%), Positives = 46/89 (51%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEV 513
L N++ L++ +N+ +++ F + L++L L N + + H F L L+E+
Sbjct: 427 LPNLMCLKL-DNNPLNQIPLDGFQVVSGLQILDLSVNA-VSFREHPKFCHLPQ---LREL 481
Query: 512 YLDDNNLSELSPDLMPWSKLDVLGMTGNS 426
YL LSE+ D++ S L +L + NS
Sbjct: 482 YLSRIQLSEVPEDILNLSNLIILDLNQNS 510
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = -3
Query: 548 RGLKDKWTLKEVYLDDNNLSELSPDL-MPWSKLDVLGMTGN 429
+G+K+ +LK + + +NN+S L P+L + L+VL + GN
Sbjct: 516 KGIKNMTSLKHLDISNNNISSLPPELGLLEPTLEVLRLDGN 556
>At4g28490.1 68417.m04076 leucine-rich repeat transmembrane protein
kinase, putative
Length = 999
Score = 30.7 bits (66), Expect = 0.97
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEV 513
L+ +IE+ END+ E+ + LK L L L N+ +S R L+ L E+
Sbjct: 474 LNGIIEISGAENDFSGEIPE-SLVKLKQLSRLDLSKNQ----LSGEIPRELRGWKNLNEL 528
Query: 512 YLDDNNLS-ELSPDLMPWSKLDVLGMTGN--SWLCNCDLVNI-VNKQGAGDKFKSDEVPY 345
L +N+LS E+ ++ L+ L ++ N S +L N+ +N S ++P
Sbjct: 529 NLANNHLSGEIPKEVGILPVLNYLDLSSNQFSGEIPLELQNLKLNVLNLSYNHLSGKIPP 588
Query: 344 CAAPMRLSGEYITNITINFCPMLDKTFSPRKTFSLSDLRPKHVLWTILAVAMVAAFGMIL 165
A + ++I N C LD RK ++ +W +L + ++A ++
Sbjct: 589 LYANKIYAHDFIGN--PGLCVDLDGLC--RKITRSKNI---GYVWILLTIFLLAGLVFVV 641
Query: 164 GLLVNAIKKVYKTR 123
G +V I K K R
Sbjct: 642 G-IVMFIAKCRKLR 654
>At5g49780.1 68418.m06165 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1006
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -3
Query: 617 LKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGM 438
+K+L VL L NR +S L + L+E+YL DN + P L + L L M
Sbjct: 317 VKTLTVLRLDRNR----LSGEIPPSLNNLTNLQELYLSDNKFTGSLPSLTSLTSLSTLRM 372
Query: 437 TG 432
G
Sbjct: 373 AG 374
>At4g31250.1 68417.m04436 leucine-rich repeat transmembrane protein
kinase, putative receptor kinase, Petunia inflata,
Patchx:G498278
Length = 676
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 659 NDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLS-EL 483
N + ++ RG L SL L+L HN+ I + F G+K L +V+L+ N S E+
Sbjct: 109 NHFEGKIPRG-IDGLVSLAHLYLAHNQFTGEIDGDLFSGMK---ALLKVHLEGNRFSGEI 164
Query: 482 SPDLMPWSKLDVLGMTGN 429
L KL L + N
Sbjct: 165 PESLGKLPKLTELNLEDN 182
>At2g15320.1 68415.m01747 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 382
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = -3
Query: 695 GLSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKE 516
G +N++ +E+G N +F L L + +N L + + + K TL+
Sbjct: 266 GENNLVAVELGFNQIRGNAP-ASFAAYPRLSSLSMRYNV-LHGVIPSEYERSK---TLRR 320
Query: 515 VYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLCNC 411
+YLD N L+ P + +V+G GN+ L C
Sbjct: 321 LYLDGNFLTGKPPARFVRTDAEVMGSLGNNCLQGC 355
>At1g74200.1 68414.m08594 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591 disease resistance protein
[Lycopersicon esculentum] gi|3894383|gb|AAC78591
Length = 302
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/88 (28%), Positives = 41/88 (46%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEV 513
L ++ L++ N EV F + SL++L L N +S + + + LK +
Sbjct: 116 LQDLHSLQISNNLLEGEVPISLFN-MSSLQLLALSANS----LSGDLPQAISGYGALKVL 170
Query: 512 YLDDNNLSELSPDLMPWSKLDVLGMTGN 429
L DNNLS + PD + + VL + N
Sbjct: 171 LLRDNNLSGVIPDTLLGKNIIVLDLRNN 198
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = -3
Query: 695 GLSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKE 516
G+ +I L + N + E+ + +F + L L L N I + L + TLK
Sbjct: 696 GMDMIISLNLSRNSFSGEIPQ-SFGNMTHLVSLDLSSNNLTGEIPES----LANLSTLKH 750
Query: 515 VYLDDNNLSELSPDLMPWSKLDVLGMTGNSWLC 417
+ L NNL P+ + ++ + GN+ LC
Sbjct: 751 LKLASNNLKGHVPESGVFKNINASDLMGNTDLC 783
>At5g40640.1 68418.m04933 expressed protein
Length = 586
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 296 INFCPMLDKTFSPRKTFSLSDLRPKHVLWTILAVAMVAAFGMILGLLV 153
I CP++ T + + + L P H +WT+ ++A G IL + +
Sbjct: 33 IVLCPLICLTVAIGNSAIILGLLPVHAIWTLYSIASAKQLGPILKIFL 80
>At1g65380.1 68414.m07417 receptor-like protein CLAVATA2 (CLV2)
identical to receptor-like protein CLAVATA2 [Arabidopsis
thaliana] gi|6049566|gb|AAF02654contains leucine
rich-repeat domains Pfam:PF00560, INTERPRO:IPR001611;
Length = 720
Score = 29.9 bits (64), Expect = 1.7
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 21/106 (19%)
Frame = -3
Query: 683 VIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHN----------RNLRY-----ISHNAF 549
++ L++ N + ++ T LKSL+ L L HN NL Y +SHNA
Sbjct: 317 LVLLDLSHNSFSGDIPL-RITELKSLQALRLSHNLLTGDIPARIGNLTYLQVIDLSHNAL 375
Query: 548 RG-----LKDKWTLKEVYLDDNNLS-ELSPDLMPWSKLDVLGMTGN 429
G + + L + + +NNLS E+ P+L L +L ++ N
Sbjct: 376 TGSIPLNIVGCFQLLALMISNNNLSGEIQPELDALDSLKILDISNN 421
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +1
Query: 151 LTRSPKIMPNAATIATARIVHRTCFGLKSDKLKVFLGENVLSNIGQKLIVIFVMYSPLNL 330
LT+ +M N +++T V G+K D +K+ L V + IG+K+ + + L
Sbjct: 397 LTKEEILMVNIGSMSTGAKV----IGVKKDMVKLQLTSPVCTTIGEKVALSRRVDRHWRL 452
Query: 331 IGAAQ*GTSSDLNLSPAP 384
IG Q + +++ P P
Sbjct: 453 IGKGQIMAGTTIDVPPPP 470
>At4g08850.2 68417.m01455 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1009
Score = 28.7 bits (61), Expect = 3.9
Identities = 26/92 (28%), Positives = 36/92 (39%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEV 513
LS + L++ N E+ F L++L+ L L HN +S KD L V
Sbjct: 597 LSQLQMLDLSYNQLDGEIS-SQFRSLQNLERLDLSHNN----LSGQIPPSFKDMLALTHV 651
Query: 512 YLDDNNLSELSPDLMPWSKLDVLGMTGNSWLC 417
+ NNL PD + GN LC
Sbjct: 652 DVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLC 683
>At4g08850.1 68417.m01454 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1045
Score = 28.7 bits (61), Expect = 3.9
Identities = 26/92 (28%), Positives = 36/92 (39%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEV 513
LS + L++ N E+ F L++L+ L L HN +S KD L V
Sbjct: 597 LSQLQMLDLSYNQLDGEIS-SQFRSLQNLERLDLSHNN----LSGQIPPSFKDMLALTHV 651
Query: 512 YLDDNNLSELSPDLMPWSKLDVLGMTGNSWLC 417
+ NNL PD + GN LC
Sbjct: 652 DVSHNNLQGPIPDNAAFRNAPPDAFEGNKDLC 683
>At1g72180.1 68414.m08346 leucine-rich repeat transmembrane protein
kinase, putative similar to GI:3641252 from [Malus x
domestica] (Plant Mol. Biol. 40 (6), 945-957 (1999))
Length = 977
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 524 LKEVYLDDNNLSELSPDLMPWSKLDVLGMTGN 429
LK + L N LS P+L P L++L ++GN
Sbjct: 124 LKVLNLTSNRLSGTIPNLSPLKSLEILDISGN 155
>At5g27060.1 68418.m03229 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 957
Score = 27.9 bits (59), Expect = 6.8
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEV 513
LSN+ L++ N++ ++ L L L L N + I ++F L L +
Sbjct: 240 LSNLTTLDLSNNNFSGQIP-SFIGNLSQLTFLGLFSNNFVGEIP-SSFGNLNQ---LTRL 294
Query: 512 YLDDNNLSELSPD-LMPWSKLDVLGMTGNSW 423
Y+DDN LS P+ L+ + L +L ++ N +
Sbjct: 295 YVDDNKLSGNFPNVLLNLTGLSLLSLSNNKF 325
>At1g17230.1 68414.m02099 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 1133
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/89 (23%), Positives = 39/89 (43%)
Frame = -3
Query: 680 IELEVGENDYXDEVKRGTFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDD 501
I L + N+ + + L+ L++L+L N+ +S + + +L + +
Sbjct: 623 ISLNISHNNLSGTIP-DSLGNLQMLEILYLNDNK----LSGEIPASIGNLMSLLICNISN 677
Query: 500 NNLSELSPDLMPWSKLDVLGMTGNSWLCN 414
NNL PD + ++D GN LCN
Sbjct: 678 NNLVGTVPDTAVFQRMDSSNFAGNHGLCN 706
>At5g62230.1 68418.m07814 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 966
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = -3
Query: 584 NRNLRYISHNAFRG-----LKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVLGMTGNSWL 420
N N +++N G L + +TL + + NNLS + P + +S+ GN +L
Sbjct: 503 NLNSLILNNNKLHGKIPDQLTNCFTLVNLNVSFNNLSGIVPPMKNFSRFAPASFVGNPYL 562
Query: 419 C 417
C
Sbjct: 563 C 563
>At5g45510.1 68418.m05590 leucine-rich repeat family protein contains
leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 1222
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 620 PLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLDVL 444
PL L++L L +L + F +DK LK + L NLSEL+ + S L+ L
Sbjct: 833 PLSGLQILDLSGTTSLVEMLEVCF---EDKLELKTLNLSGTNLSELATTIEDLSSLNEL 888
>At5g15680.1 68418.m01834 expressed protein
Length = 2151
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 349 GTSSDLNLSPAPCLLTMLTRSQLHS-QLLPVIPRTSSLLHGIRSGDNSLK 495
G S+ LSP P L ++ + S QLLP + S L G+RS SL+
Sbjct: 1452 GRSASGPLSPMPPELNIVPVATGRSGQLLPSLVNASGPLMGVRSSTGSLR 1501
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 488 ELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVNKQ 384
E+ P +PW K+ + +S +C+ + N V +Q
Sbjct: 1322 EVLPGCLPWQKIKCEQLFQSSIICSASIYNTVKRQ 1356
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 488 ELSPDLMPWSKLDVLGMTGNSWLCNCDLVNIVNKQ 384
E+ P +PW K+ + +S +C+ + N V +Q
Sbjct: 1319 EVLPGCLPWQKIKCEQLFQSSIICSASIYNTVKRQ 1353
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -3
Query: 692 LSNVIELEVGENDYXDEVKRGTFTPLKSLKVLHLC-HNRNLRYISHNAFRGLKDKWTLKE 516
L ++ L + +ND+ G+ L +L VL LC + +L+ +S +++ K K+ L
Sbjct: 291 LQSLEYLSLFDNDFEGSFSFGSLANLSNLMVLKLCSKSSSLQVLSESSW---KPKFQLSV 347
Query: 515 VYLDDNNLSELSPDLMPWSKLDVLGMTGNS 426
+ L N+ ++ L+ L + ++ N+
Sbjct: 348 IALRSCNMEKVPHFLLHQKDLRHVDLSDNN 377
>At1g54480.1 68414.m06214 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]
Length = 550
Score = 27.5 bits (58), Expect = 9.0
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Frame = -3
Query: 629 TFTPLKSLKVLHLCHNRNLRYISHNAFRGLKDKWTLKEVYLDDNNLSELSPDLMPWSKLD 450
+F+ LK ++ L L HN + + + L + +L + NNLS + P ++ D
Sbjct: 404 SFSNLKDIESLDLSHNM----LQGSIPQQLTNLSSLVVFDVSYNNLSGIIPQGRQFNTFD 459
Query: 449 VLGMTGNSWLC------NCDLVNIVNKQGAGDKFKSDEVP 348
GN LC +CD ++ G + + DE P
Sbjct: 460 EKSYLGNPLLCGPPTNRSCDAKKTSDESENGGEEEDDEAP 499
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,312,391
Number of Sequences: 28952
Number of extensions: 298200
Number of successful extensions: 820
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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