Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i05f
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    41   7e-06
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.9  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   9.9  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   9.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   9.9  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 41.1 bits (92), Expect = 7e-06
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
 Frame = +3

Query: 228 VTFFNNSITNITQLSPIPGNRIA-ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQV 404
           V F  NS+ N+ Q +     ++  I    NR+  +E  AF N+  L  L+L  NKI+   
Sbjct: 97  VYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIA--T 154

Query: 405 LRSEIFQGPYEDGIYREIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLN 554
           +  E FQ   E        LE L+L YN I SLD  +F    +L   ++N
Sbjct: 155 IAYETFQNLPE--------LEDLDLAYNSISSLDFNIFDQVGSLGMFHVN 196



 Score = 34.3 bits (75), Expect = 7e-04
 Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
 Frame = +3

Query: 222 VLVTFFNNSITNITQ--LSPIPGNRIAISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKIS 395
           VL   FNN IT++ +    P+  + + +    N+++    D F N+P L  LDLS+N + 
Sbjct: 227 VLDLSFNN-ITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSL- 284

Query: 396 GQVLRSEIFQGPYEDGIYREIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNN 560
              L  + F+   +        L+ L+  +N I  +   LF++  NL  +  ++N
Sbjct: 285 -YELDFDTFRNTKK--------LQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHN 330



 Score = 34.3 bits (75), Expect = 7e-04
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +3

Query: 297 ISFKSNRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIA-LETL 473
           +    N + E++ D FRN  +L +LD S+N+I      SEI      + ++R +  L  +
Sbjct: 277 LDLSHNSLYELDFDTFRNTKKLQWLDTSHNRI------SEI-----PNDLFRFLGNLRIV 325

Query: 474 NLGYNEIHSLDRYLFKYTPNLTRLYLNNN 560
           +  +N + SL   LF+ T  L RL +++N
Sbjct: 326 DFSHNRLRSLPDNLFRET-GLERLDVSHN 353



 Score = 29.5 bits (63), Expect = 0.021
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 18/105 (17%)
 Frame = +3

Query: 309 SNRVIEIEDDAFRNIPRLVYLDLSNNKI------SGQVLRS------------EIFQGPY 434
           S+ V     DA + + RL  LDLSNN++      S   LRS             I +G +
Sbjct: 27  SSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTF 86

Query: 435 EDGIYREIALETLNLGYNEIHSLDRYLFKYTPNLTRLYLNNNPIE 569
           +  I+R+  L  +   +N + ++ ++ F     L +++L++N IE
Sbjct: 87  QGDIHRD--LTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIE 129



 Score = 28.3 bits (60), Expect = 0.049
 Identities = 25/85 (29%), Positives = 39/85 (45%)
 Frame = +3

Query: 312 NRVIEIEDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNE 491
           NR+ +I+   F+ IPRL  L+L +N      +    FQG      Y  + L   N+  ++
Sbjct: 404 NRLGQIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQGLE----YTLLHLNLDNVSLSQ 459

Query: 492 IHSLDRYLFKYTPNLTRLYLNNNPI 566
           + +L       TPNL  L L  N +
Sbjct: 460 VPALS------TPNLLSLSLAFNSL 478



 Score = 26.2 bits (55), Expect = 0.20
 Identities = 22/79 (27%), Positives = 40/79 (50%)
 Frame = +3

Query: 330 EDDAFRNIPRLVYLDLSNNKISGQVLRSEIFQGPYEDGIYREIALETLNLGYNEIHSLDR 509
           +D     +  +  LDLS N I+   +  + F+ P E      ++L  L LG+N++ +  +
Sbjct: 215 QDTGLGGLQNIKVLDLSFNNITS--VAKQFFR-PVE------LSLMQLYLGHNKLLNATK 265

Query: 510 YLFKYTPNLTRLYLNNNPI 566
            LF   P+L  L L++N +
Sbjct: 266 DLFGNMPHLQVLDLSHNSL 284


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 248 HYKYNATESDTGEQDRDQFQIKSR 319
           HY+  A +  T ++DR ++ + +R
Sbjct: 52  HYEGRAVDITTSDRDRSKYGMLAR 75


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 359 SRDVPESVIFDFNNAI 312
           S+DVP+ +   F++AI
Sbjct: 188 SKDVPQMITITFDDAI 203


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 437 FVRSLEYLTPENL 399
           +V S EYL P+N+
Sbjct: 16  YVSSQEYLVPQNI 28


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 437 FVRSLEYLTPENL 399
           +V S EYL P+N+
Sbjct: 16  YVSSQEYLVPQNI 28


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -1

Query: 511  YLSNEWIS 488
            YLSN+W+S
Sbjct: 2629 YLSNQWVS 2636


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 12/52 (23%), Positives = 29/52 (55%)
 Frame = +1

Query: 286 TGSRSVSNQIALLKSKMTLSGTSRDWSIWISAIIKFQVKFSGVRYSKDLTKM 441
           TG + +   ++  K K+T + + +     ++++ K+Q +F  VR + D+ K+
Sbjct: 63  TGEQWMQKVVSFHKLKLTNNISDKHGFTILNSMHKYQPRFHLVR-ANDILKL 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,452
Number of Sequences: 336
Number of extensions: 2598
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)