Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i03r
         (634 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   1.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   3.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   7.5  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 514 LLYXIAAFINLCELNESNKISITQRFIYVSMKVHR 618
           +L+  A+ +NLC ++     +IT  F Y S    R
Sbjct: 127 VLFSTASILNLCVISLDRYWAITDPFTYPSKMSRR 161


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 514 LLYXIAAFINLCELNESNKISITQRFIY 597
           +L   A+ ++LC ++    +++TQ  IY
Sbjct: 119 ILLCTASILSLCAISIDRYLAVTQPLIY 146


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 296 LSHVLMKXDTSFSVLIYNT*VNNSCNLFVL 207
           L H  MK     +V + N    ++C+LFV+
Sbjct: 264 LEHFEMKIKRKHNVFVNNILAASACSLFVV 293


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 232 FTYVLYIRTEKDVSXFIRTCDSTSX*EFHH 321
           FTY + + ++K+V   +R        EF H
Sbjct: 498 FTYHIVVNSDKNVKGMVRIFLGPKYDEFGH 527


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 232 FTYVLYIRTEKDVSXFIRTCDSTSX*EFHH 321
           FTY + + ++K+V   +R        EF H
Sbjct: 498 FTYHIVVNSDKNVKGMVRIFLGPKYDEFGH 527


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 232 FTYVLYIRTEKDVSXFIRTCDSTSX*EFHH 321
           FTY + + ++K+V   +R        EF H
Sbjct: 124 FTYHIVVNSDKNVKGMVRIFLGPKYDEFGH 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,531
Number of Sequences: 438
Number of extensions: 2262
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)