Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11i01f
         (627 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   134   2e-33
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           93   5e-21
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           85   1e-18
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   0.85 
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     25   1.5  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    24   3.4  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    23   7.9  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  134 bits (324), Expect = 2e-33
 Identities = 68/174 (39%), Positives = 101/174 (58%), Gaps = 3/174 (1%)
 Frame = +2

Query: 62  VTIIVFVFLCVFTSGTNGENRVAVAHLVSGKITGTIVFTETS--EGLHITGTITGLPAGR 235
           V I +   LCV  +       +      SG ++G +  ++ S  E + I   + GL  G+
Sbjct: 3   VLIALSTVLCVVLAKDQPRKAIVYLQGTSG-VSGNVTISQPSCTEPVFIDINVVGLTPGK 61

Query: 236 YGFHVHALGD-TSTCDAAGPHFDPEGNNHGGPDHNVRHVGDLGNVVFVGNQEPVATVNFV 412
           +GFH+H  GD T  C + G H++P+  +HG P+  VRHVGDLGN+    ++  +A  ++ 
Sbjct: 62  HGFHIHEKGDLTDGCASTGGHYNPDKVSHGAPNDQVRHVGDLGNIA--ADENGIAKTSYS 119

Query: 413 DRLITLRGKNNIIGRTLVLHEQEDDLGLGGHELSLTTGNAGPRVACGVIGIRSP 574
           D +++L G  ++IGR +V+H + DDLG   H  SL TGNAG RVACGVIGI  P
Sbjct: 120 DTVVSLYGARSVIGRAIVIHAEVDDLGKTNHPDSLKTGNAGGRVACGVIGILEP 173


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 93.5 bits (222), Expect = 5e-21
 Identities = 43/90 (47%), Positives = 60/90 (66%)
 Frame = +2

Query: 296 FDPEGNNHGGPDHNVRHVGDLGNVVFVGNQEPVATVNFVDRLITLRGKNNIIGRTLVLHE 475
           ++P+GN+HG PD    HVGDLGN+V       +A +   ++ +TL G  +IIGRTL + E
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNIVAYSTG--LAKIQIANKKLTLVGDRSIIGRTLSISE 58

Query: 476 QEDDLGLGGHELSLTTGNAGPRVACGVIGI 565
            EDDLG G H+ S TTGN+G  +AC +IG+
Sbjct: 59  YEDDLGRGKHDYSKTTGNSGNCIACAIIGV 88


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 85.4 bits (202), Expect = 1e-18
 Identities = 41/74 (55%), Positives = 52/74 (70%)
 Frame = +2

Query: 344 HVGDLGNVVFVGNQEPVATVNFVDRLITLRGKNNIIGRTLVLHEQEDDLGLGGHELSLTT 523
           H GD+GN+V   N E  A V+     I L G  N++GR+LV+H   DDLG+GGHELS TT
Sbjct: 1   HAGDMGNIVADENGE--AKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTT 58

Query: 524 GNAGPRVACGVIGI 565
           G+AG R+ACGVIG+
Sbjct: 59  GDAGARLACGVIGL 72


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +2

Query: 446 IIGRTLVLHEQEDDLGLGGHELSLTTGNAGPRVACGVIGIRSPV 577
           + G   V+   ++D  +G  ++    GN GP       G  SP+
Sbjct: 806 LTGNVSVMRSDDEDDDIGSLDMHRPEGNRGPSSPSSTSGAASPI 849


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +2

Query: 110 NGENRVAVAHLVSGKITGTIVFTETSEGLHITGTITGLPAGRYGFHVHALGDTSTCDAAG 289
           NG N++A A    G + G + F      +++    TGLPAG Y   +    +  TC    
Sbjct: 418 NGNNQIAFAR---GDV-GFVAFNNEPFDMNVI-LQTGLPAGIYCDVISGAREGETCTGLQ 472

Query: 290 PHFDPEG 310
              +P G
Sbjct: 473 VIVEPNG 479


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 12/49 (24%), Positives = 20/49 (40%)
 Frame = -3

Query: 586 IPHNW*SNTDDSASYTWSSITSRQG*LVSSQSEIVFLFMQHKRTTNNVV 440
           + H W  NT     Y      S +  ++ +Q E +    QH+R   + V
Sbjct: 145 VRHKWGRNTGKPRGYQQQQSQSHRQVVIGTQQECLQPEQQHQRQQQHTV 193


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +3

Query: 228 PGDTGSMFMLSE--TRALVTPPGHTSTLKATIM 320
           P  TG +  L +  T   +T PGHT +  A I+
Sbjct: 49  PNGTGLLGGLDKNGTEVTITAPGHTDSTVAVII 81


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,892
Number of Sequences: 2352
Number of extensions: 13446
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)