Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h24r
(367 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369... 63 7e-11
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847... 63 7e-11
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86... 55 1e-08
03_06_0582 - 34891613-34891795,34892407-34892466,34893134-348932... 42 1e-04
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 35 0.017
03_01_0463 + 3551764-3551897,3551989-3552046,3552148-3552255,355... 30 0.64
04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455 29 1.1
01_06_1221 - 35495427-35496542,35496650-35496839,35496988-354970... 29 1.1
01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841 29 1.5
11_06_0715 + 26552962-26553510,26553578-26555746 28 2.0
09_04_0421 + 17417851-17418840 28 2.0
07_01_0703 - 5295561-5297523,5299344-5299462 28 2.0
02_05_1269 + 35352825-35352888,35353645-35353968,35355062-353551... 28 2.0
02_03_0201 + 16302797-16302799,16303949-16304084,16304163-163042... 28 2.6
05_04_0280 - 19752112-19752451,19754104-19755587 27 3.4
08_02_0818 - 21524539-21524664,21524911-21524961,21525800-215261... 27 4.5
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 27 4.5
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900... 27 4.5
12_02_0691 - 22195142-22196197 27 6.0
04_01_0327 + 4325225-4327486 27 6.0
03_06_0051 + 31290431-31290610,31290727-31290849,31291771-312919... 27 6.0
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353... 27 6.0
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 26 7.9
10_01_0088 + 1087807-1088282,1088752-1088974 26 7.9
09_04_0689 - 19480409-19480599,19480780-19480889,19481032-194811... 26 7.9
>08_01_0417 -
3692247-3692329,3692442-3692504,3693233-3693350,
3694084-3694095
Length = 91
Score = 62.9 bits (146), Expect = 7e-11
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = -1
Query: 307 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 134
M L E F+Q A+K + S++ L LY LYKQAT+GDVN A+P + AKW AW
Sbjct: 1 MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTARPGIFAQRDRAKWDAW 60
Query: 133 NGRKGISQD 107
+G S++
Sbjct: 61 KAVEGKSKE 69
>03_05_0107 -
20883353-20883627,20883739-20883801,20884608-20884725,
20885012-20885023
Length = 155
Score = 62.9 bits (146), Expect = 7e-11
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = -1
Query: 307 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 134
M L E F++ A+KV+ S+++ L LY LYKQAT+GDVN ++P + AKW AW
Sbjct: 1 MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTSRPGIFAQRDRAKWDAW 60
Query: 133 NGRKGISQD 107
+G S++
Sbjct: 61 KAVEGKSKE 69
>06_01_0108 -
860080-860162,860276-860338,860857-860974,861481-861492
Length = 91
Score = 55.2 bits (127), Expect = 1e-08
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = -1
Query: 307 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAW 134
M L E+F++ A+K + S+++ L LY LYKQAT+G V +P L + KW AW
Sbjct: 1 MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVTTGRPGIFNLKDRYKWDAW 60
Query: 133 NGRKGISQD 107
+G S++
Sbjct: 61 KAVEGKSKE 69
>03_06_0582 -
34891613-34891795,34892407-34892466,34893134-34893280,
34893502-34893657,34893745-34893828,34893907-34893995,
34894575-34894689,34894776-34894899,34895080-34895219,
34895868-34895929,34896042-34896108,34896185-34896295,
34896868-34896945,34897074-34897274,34897492-34897563,
34897630-34897693,34898084-34898154,34898328-34898474
Length = 656
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = -1
Query: 241 DDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNG 128
+D L LY LY+QAT+G N+ +P VE +KW +W+G
Sbjct: 37 NDVALLLYGLYQQATVGPCNVPKPRAWNPVEQSKWTSWHG 76
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 35.1 bits (77), Expect = 0.017
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -1
Query: 253 TKPSDDENLALYSLYKQATIGDVNIAQPSG--LVESAKWKAWN 131
T + L LY LYK AT G QPS L AKW AW+
Sbjct: 109 TSVPEQAQLQLYGLYKIATEGPCTAPQPSALKLKARAKWNAWH 151
>03_01_0463 +
3551764-3551897,3551989-3552046,3552148-3552255,
3552664-3552721,3552788-3553014,3553085-3553145,
3553311-3553615
Length = 316
Score = 29.9 bits (64), Expect = 0.64
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Frame = -1
Query: 340 TLPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 161
T+ PD + DE + A++ + KP+ + +SLY AT ++ +
Sbjct: 189 TVFPDAEARLSQPKDETWSDCAEQ--GFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPV 246
Query: 160 VESAKWKA--W--------NGRKGISQDRCQEAIHRKC 77
++ KW A W NGR+ S D+C++ H C
Sbjct: 247 IQGEKWSATKWIHVRSYDENGRR--SSDKCEDQ-HALC 281
>04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455
Length = 300
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 366 TVPIGTLQLPYLLISKDNT-KCLSTSNSNRSPIRLGTGRPSP 244
++ L + +L+IS NT K L++ S+ SP +LG G P P
Sbjct: 114 SISASLLGIIFLIISLRNTNKGLTSLQSSSSPTKLGDGLPLP 155
>01_06_1221 -
35495427-35496542,35496650-35496839,35496988-35497061,
35497407-35497573,35497685-35498018
Length = 626
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 68 SFSAFSMYCFLASILGDAFATVPCLPLGALH 160
SFS + ++C +A ILGD + + L +H
Sbjct: 250 SFSGYKVFCAIAMILGDGIFQLVAISLRTIH 280
>01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841
Length = 534
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +3
Query: 123 LRPFHAFHLALSTRPLGWAMLTSPMVACLYREYSARFSSSLGLVFQFLTLSATCLNCSSR 302
LR + +A+ R L + + SP++ CL YS R L L L C+ C +
Sbjct: 230 LRELGLYCVAMEDRDLDFVLANSPVLECLGIYYSQRQIVLLRLASHSLRCVQICM-CIAE 288
Query: 303 DI 308
DI
Sbjct: 289 DI 290
>11_06_0715 + 26552962-26553510,26553578-26555746
Length = 905
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +2
Query: 206 LVQGVQRKVLIVTGLGLP---VPNLIGDLFEL 292
LV G R + ++ +GLP +PN+IGDLF L
Sbjct: 560 LVAGKCRYMSVLELIGLPKDNIPNVIGDLFNL 591
>09_04_0421 + 17417851-17418840
Length = 329
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +1
Query: 106 DLGRCLCDRSMPSTWRSPQDRW----AGQC*HHLW*PACTGSTAQ 228
D GR C++ WR + W G H LW P CT + AQ
Sbjct: 275 DRGRLYCEKLRECGWRGEVEIWEADGQGHGFHLLW-PTCTQAEAQ 318
>07_01_0703 - 5295561-5297523,5299344-5299462
Length = 693
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 210 YREYSARFSSSLGLVFQFLTLSAT--CLNCSSRDILCYLLRSGGR 338
+RE A+ + +G + Q L+ C NCS +L L +S GR
Sbjct: 454 FREDDAQLAEEIGDLVQLRVLNVVLNCSNCSEAKVLTELAKSMGR 498
>02_05_1269 +
35352825-35352888,35353645-35353968,35355062-35355183,
35355361-35355482,35355651-35355755,35356402-35356765,
35357181-35357321,35357619-35359109
Length = 910
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 179 CPAQRSCGERQVEGMERSQRHLPRSMPRSNTSKMRRN-STPNTHKL 45
C C EG+ R+ + PRS+TS R+ S+P H L
Sbjct: 238 CKGNLICTREVNEGLNRTGSSTTSTTPRSSTSDYSRSRSSPRVHSL 283
>02_03_0201 +
16302797-16302799,16303949-16304084,16304163-16304250,
16305531-16305683,16306647-16306809,16306906-16307090,
16307164-16307337,16308055-16308200,16308369-16308492,
16308608-16308788,16309302-16309371,16310155-16310196,
16310276-16310394,16310474-16310672,16311442-16311573,
16312435-16312538,16312641-16312820,16314000-16314090,
16314100-16314139,16314225-16314364,16314500-16314660,
16314897-16315020,16315104-16315255
Length = 968
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 92 CFLASILGDAFATVPCLPLGALHKTAGLGNV-NITYGSLLVQGVQ 223
C L ++ +AF P L L LHK + + NI + + GV+
Sbjct: 728 CLLVQVIANAFYYNPSLTLATLHKLGAVTEIFNIWFEQVKKSGVR 772
>05_04_0280 - 19752112-19752451,19754104-19755587
Length = 607
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +3
Query: 63 SGVSPHFRCIASWHRSWEMPLRPFHAF---HLALSTRPLGWAMLTSPMV 200
S +P A W SW P H+F HL + P+ A+L P V
Sbjct: 38 SSSAPPDPAAARWPSSWSPAAPPLHSFAASHLREAVSPIAAAILALPGV 86
>08_02_0818 -
21524539-21524664,21524911-21524961,21525800-21526170,
21526497-21526852,21527926-21527996
Length = 324
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = -1
Query: 280 VADKVRNWKTKP----SDDENLALYSLYKQAT 197
V D++ W P +D+EN + +LYK+AT
Sbjct: 241 VKDRIEEWYRPPWDRTADEENASFNALYKEAT 272
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1
Query: 238 DENLALYSLYKQATIGDVNIAQPSGLVES 152
DE+ AL +L+ A + VNI QPS +VES
Sbjct: 476 DESSALDALHTLADLS-VNILQPSSIVES 503
>01_04_0143 +
16689471-16689498,16689687-16689818,16689974-16690013,
16690214-16690280,16690349-16690431,16690755-16690821,
16692741-16692821,16693696-16693791,16694172-16694198
Length = 206
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 259 WKTKPSDDENLALYSLYKQATIGDVNIAQ 173
WK S ++NLA +++Y T V++ Q
Sbjct: 138 WKVSRSSEQNLAFFAVYNMETTDIVSLYQ 166
>12_02_0691 - 22195142-22196197
Length = 351
Score = 26.6 bits (56), Expect = 6.0
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Frame = +3
Query: 129 PFHAFHLALSTRPLGWAMLTSPMVACLYREYSARFSSSLG---LVFQFLTLSATCLNCSS 299
PF + LA P G PM+AC +A ++ L L + L A N S+
Sbjct: 57 PFSVYALAFLRAPRGLHQTPYPMLACAVAAPAALLAAVLAVPVLAADDVAL-AWAANASA 115
Query: 300 RDILCYLLRSGGRVVARFQLV 362
L + L +GG F V
Sbjct: 116 AAALWWCLTNGGYTAVAFSRV 136
>04_01_0327 + 4325225-4327486
Length = 753
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 60 WSGVSPHFRCIASWHRSWEMPLRPFHAFHLALSTRPLGW 176
W+G H + W R + +R +H FH + + LGW
Sbjct: 339 WTGFLLHSKLQPGWIRHEVLCMRRWHRFHSVIMS--LGW 375
>03_06_0051 +
31290431-31290610,31290727-31290849,31291771-31291928,
31292395-31292497,31293077-31293172,31293367-31293432,
31293500-31293619,31293905-31293991
Length = 310
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -1
Query: 274 DKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 137
+K K KP + L YSL TI ++ +++ KW A
Sbjct: 254 EKCIGLKVKPRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVA 299
>01_07_0064 +
40834649-40834786,40834934-40834997,40835333-40835391,
40835602-40835677,40835775-40835846,40837641-40837728,
40838239-40838497,40838766-40839000,40839447-40839470,
40839910-40839997,40840110-40840300,40841082-40841322,
40841803-40842556
Length = 762
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -1
Query: 337 LPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 161
L P + K D FK+ D+V +W T D+ N+A Y + + P G+
Sbjct: 161 LSPRILEDFKAYADVCFKEFGDRVAHWIT--IDEPNVASIGSYDSGQLAPGRCSDPFGI 217
>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
3384640-3384709,3385878-3386002,3387128-3387268,
3387362-3387519,3387644-3387803,3390136-3390213,
3390326-3390385,3390473-3390528,3391886-3392090,
3394107-3394192,3394296-3394406,3394536-3394607,
3395453-3395538,3395730-3395878,3396107-3396250,
3396335-3396442,3396997-3397027,3397609-3397713,
3398283-3398407,3398807-3398950,3399073-3399177,
3400748-3400799,3401549-3401696,3401936-3402130,
3402404-3402647,3403152-3403259,3403887-3404034,
3405467-3405525,3405876-3405945,3407008-3407333,
3407666-3409204,3410526-3410733,3410870-3410906,
3411024-3411072,3411143-3411271
Length = 2025
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 367 DSTNWNLATTLPPDLKR*HKMSLDEQ 290
DS NWNL+ PP +K +M L+E+
Sbjct: 1756 DSPNWNLSFGCPPIIK--EEMKLNEE 1779
>10_01_0088 + 1087807-1088282,1088752-1088974
Length = 232
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 146 VEGMERSQRHLPRSMPRSNTSKMRRNSTPNTHKLLL 39
+EG+ + HLP P N + +R + TH +LL
Sbjct: 183 LEGVIMALSHLPHKSPGENLAPVRTSGGGVTHHVLL 218
>09_04_0689 -
19480409-19480599,19480780-19480889,19481032-19481117,
19481410-19481523,19481697-19482066,19482216-19482346,
19482628-19482736,19482901-19483022,19483113-19483219,
19483447-19483551,19483654-19483812,19484071-19484126,
19484200-19484251,19486724-19486821,19487086-19487210
Length = 644
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 260 VPNLIGDLFELLVERHFVLSF 322
VP G+ ++LL E+HFVL +
Sbjct: 447 VPVTAGNFYKLLAEKHFVLLY 467
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,470,360
Number of Sequences: 37544
Number of extensions: 257754
Number of successful extensions: 873
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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