Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h24r
(367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme... 62 9e-11
Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 52 1e-07
AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical ... 50 5e-07
U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a... 44 3e-05
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 43 8e-05
U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical pr... 31 0.19
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 30 0.58
Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical pr... 28 1.8
AF098999-1|AAC68727.1| 150|Caenorhabditis elegans Hypothetical ... 28 2.4
AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical... 28 2.4
Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed ... 27 4.1
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 27 5.4
AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical ... 27 5.4
AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 27 5.4
AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical ... 27 5.4
Z81072-3|CAB03022.1| 486|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z71186-9|CAE17800.1| 59|Caenorhabditis elegans Hypothetical pr... 26 7.2
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 26 7.2
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 26 7.2
AL021502-3|CAE18039.1| 59|Caenorhabditis elegans Hypothetical ... 26 7.2
AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase prot... 26 7.2
AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical ... 26 7.2
AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase prot... 26 7.2
AC024776-19|AAK68480.2| 398|Caenorhabditis elegans Hypothetical... 26 7.2
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 26 9.5
>AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 1 protein.
Length = 86
Score = 62.5 bits (145), Expect = 9e-11
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = -1
Query: 289 FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWNGRKGI 116
F A V+ KT PS+DE L LY+L+KQ T+GD +P L AKW AW+ +KG+
Sbjct: 5 FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGDNTTDKPGMFDLKGKAKWSAWDEKKGL 64
Query: 115 SQDRCQEA 92
++D Q+A
Sbjct: 65 AKDDAQKA 72
>Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical
protein F47B10.7 protein.
Length = 116
Score = 61.7 bits (143), Expect = 2e-10
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Frame = -1
Query: 307 MSLDEQFKQVADKVRNW-KTKP---SDDENLALYSLYKQATIGDVNIAQPS--GLVESAK 146
MSL E+F + ++ KT P S+D+ L YSL+KQA+IGDVN +P ++E K
Sbjct: 1 MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVNTDRPGIFSIIERKK 60
Query: 145 WKAWNGRKGISQDRCQE 95
W +W +G+SQD +E
Sbjct: 61 WDSWKELEGVSQDEAKE 77
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 52.0 bits (119), Expect = 1e-07
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = -1
Query: 304 SLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWN 131
S F++ ++ K +P +D L LY L+KQAT GDV +P V AK+ AWN
Sbjct: 24 SAQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQGKRPGMMDFVGRAKYDAWN 83
Query: 130 GRKGISQDRCQ 98
KG +QD +
Sbjct: 84 TLKGQTQDEAR 94
>AL023828-1|CAA19448.1| 115|Caenorhabditis elegans Hypothetical
protein Y17G7B.1 protein.
Length = 115
Score = 50.0 bits (114), Expect = 5e-07
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -1
Query: 289 FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVN----IAQPSG-LVESAKWKAWNGR 125
F+ A+++R K++P+D E L LY+LYKQA GD+ P+G V K+ AW +
Sbjct: 15 FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74
Query: 124 KGISQDRCQ 98
KG + ++C+
Sbjct: 75 KGANSEKCR 83
>U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 4 protein.
Length = 146
Score = 44.4 bits (100), Expect = 3e-05
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Frame = -1
Query: 304 SLDEQFKQVADKV----RNWKTKPSDDENLALYSLYKQATIGDVNIAQP--SGLVESAKW 143
SLDEQF+ + +N K S ++ L +YSLYKQAT G + QP + + KW
Sbjct: 4 SLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTIQPYFFQIEQRMKW 63
Query: 142 KAWN 131
AWN
Sbjct: 64 NAWN 67
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 42.7 bits (96), Expect = 8e-05
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 250 KPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAWNGRKGISQDRCQEA 92
K S DE L Y+L+KQAT G ++ +PS + KW AWN ++ D ++A
Sbjct: 21 KTSTDEKLNFYALFKQATHGKCDLPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQA 75
>U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical
protein F26A1.15 protein.
Length = 219
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 17/86 (19%)
Frame = -1
Query: 223 LYSLYKQATIGDVNIAQPS--------------GLVESAKWKAWNGRKGISQDRCQEAIH 86
++ LY+QA +GDVN+ + + + + KW AWN +G++++ E
Sbjct: 123 VWGLYQQAIVGDVNVPKLNYMEIDEGEKSWMWRWINGNEKWHAWNKCRGLTKEEASEQYV 182
Query: 85 RKCGETPL---QIRINYYLELNKFPT 17
+ + Q+ IN+ +E++ PT
Sbjct: 183 EAVQKLKIDIQQLLINWKIEISNEPT 208
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 29.9 bits (64), Expect = 0.58
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2
Query: 288 SNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAP 148
+ ++P + T RP P T T+R P P TLP + RAP
Sbjct: 110 TTQAPTTIRTTRPPPAT--TIRTIPFVQTTPATFATLPPAPAVTRAP 154
>Z83219-5|CAM35834.1| 390|Caenorhabditis elegans Hypothetical
protein C31C9.8 protein.
Length = 390
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -1
Query: 235 ENLALYSLYKQA--TIGDVNIAQPSGLVESAKWKAWNGRKGISQDRCQEAIHRKCGETPL 62
+NL ++ +K +GD I P E ++ + G ++ DR QE IH + PL
Sbjct: 22 KNLPIFESFKNFCHVLGDDLIGFPE--FEFWFYRFYKGDFDLNYDRSQETIHPTLFDLPL 79
Query: 61 QIRINYYLELN 29
QI LN
Sbjct: 80 QIHDKILKNLN 90
>AF098999-1|AAC68727.1| 150|Caenorhabditis elegans Hypothetical
protein W04C9.4 protein.
Length = 150
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 153 APSGRHGTVAKASPKIDAKKQYIENAEKLHSKY 55
AP+G+ GT A+ K AKK Y + KY
Sbjct: 94 APTGKRGTTAQYITKKKAKKMYKKMTHDARDKY 126
>AC024214-14|AAU87808.1| 644|Caenorhabditis elegans Hypothetical
protein Y77E11A.12b protein.
Length = 644
Score = 27.9 bits (59), Expect = 2.4
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 122 FATVPCLPLGALHKTAGLGNVNITYGSLLVQGVQRKVLIVTGLGLPVPNL 271
+ +VP L LG + G N N LL QG +L GLG PNL
Sbjct: 7 YLSVPMLNLGQRRSSEGYLNAN----DLLSQGGGESLLDSAGLGTSQPNL 52
>Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical
protein F26A3.3 protein.
Length = 1632
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -1
Query: 274 DKVRNWK-----TKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 137
D +R W +KPSDD + +L +++ + I ++ P VE K+ +
Sbjct: 719 DNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSS 769
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 27.1 bits (57), Expect = 4.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 136 WNGRKGISQDRCQEAIHRKC 77
W G++G+S C+ +H +C
Sbjct: 289 WGGKQGLSCSLCKYTVHERC 308
>AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed RNA
polymerase relatedEGO-1 protein.
Length = 1632
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = -1
Query: 274 DKVRNWK-----TKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 137
D +R W +KPSDD + +L +++ + I ++ P VE K+ +
Sbjct: 719 DNLRQWSISYNISKPSDDSSWSLNCMFRPSQIKFISKRHPRDQVEIVKYSS 769
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 49 LCVFGVEFLRIFDVLLLGIDLGRCLCDRS 135
LC+F FL + + GI +G CLC+ S
Sbjct: 308 LCIFHFIFLTQKSIPIFGILIGICLCNFS 336
>AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical
protein C09H5.2b protein.
Length = 1039
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 51 MRIWSGVSPHFRCIASWHRSWEMPLRPFHAFHLALSTRPLGWA 179
+R SG+ S+H +E+P +HL L+T WA
Sbjct: 488 LRYASGMLDAMEVRDSFHVVFEVPFNSVRKYHLILATTEATWA 530
>AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical
protein C09H5.2a protein.
Length = 1054
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 51 MRIWSGVSPHFRCIASWHRSWEMPLRPFHAFHLALSTRPLGWA 179
+R SG+ S+H +E+P +HL L+T WA
Sbjct: 488 LRYASGMLDAMEVRDSFHVVFEVPFNSVRKYHLILATTEATWA 530
>AF016426-4|AAB65343.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 5.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 57 IWSGVSPHFRCIASWHRSW 113
+W GV P++ C SW R W
Sbjct: 289 VWQGV-PYWLCANSWGRQW 306
>Z81072-3|CAB03022.1| 486|Caenorhabditis elegans Hypothetical
protein F30A10.4 protein.
Length = 486
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 11/56 (19%)
Frame = +1
Query: 37 LSNNLCVFGVEFLR--------IFDVLLLGIDLGRCLCDRSM---PSTWRSPQDRW 171
L +++CV GVEFL+ I + + D G +C R M T +P +W
Sbjct: 406 LRHSICVIGVEFLQELSKSPMVIANKVTANFDFGTIICVREMIKTNKTGNNPDSQW 461
>Z71186-9|CAE17800.1| 59|Caenorhabditis elegans Hypothetical
protein F23D12.7 protein.
Length = 59
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 58 FGVEFLRIFDVLLLGIDLGRCLCDRSMPSTWRSPQD 165
F + FL +F VLL+GI L + + +R PQD
Sbjct: 4 FLLSFLTLFMVLLVGISLSAPIPNIDNAEDFRYPQD 39
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 294 SNSNRSPIRLGTGRPSPVTMRTLRCTPCTSR 202
+N NR + G S + TL+CT C+ R
Sbjct: 645 ANDNRCAVCAGERHSSSMCYSTLKCTYCSGR 675
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
protein protein.
Length = 2150
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 72 SPHFRCIASWHRSWEMPLRPF 134
SP FR + + W +PLRPF
Sbjct: 447 SPMFRLLRTEQYLWSIPLRPF 467
>AL021502-3|CAE18039.1| 59|Caenorhabditis elegans Hypothetical
protein F23D12.7 protein.
Length = 59
Score = 26.2 bits (55), Expect = 7.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 58 FGVEFLRIFDVLLLGIDLGRCLCDRSMPSTWRSPQD 165
F + FL +F VLL+GI L + + +R PQD
Sbjct: 4 FLLSFLTLFMVLLVGISLSAPIPNIDNAEDFRYPQD 39
>AF399825-1|AAK77200.1| 1262|Caenorhabditis elegans separase protein.
Length = 1262
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 137 MERSQRHLPRSMPRSNTSKMRRNSTPNTHK 48
+E+ QR+LP++ S + MR + P T K
Sbjct: 1145 VEKDQRNLPQTPKTSARTSMRMETVPKTPK 1174
>AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical
protein K12B6.8 protein.
Length = 714
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 133 NGRKGISQDRCQEAIHRKCGETPLQ 59
N + I +RC ++IH KC LQ
Sbjct: 665 NDKSAIKCERCTKSIHEKCAAPLLQ 689
>AC024791-1|AAF60651.1| 1262|Caenorhabditis elegans Separase protein 1
protein.
Length = 1262
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 137 MERSQRHLPRSMPRSNTSKMRRNSTPNTHK 48
+E+ QR+LP++ S + MR + P T K
Sbjct: 1145 VEKDQRNLPQTPKTSARTSMRMETVPKTPK 1174
>AC024776-19|AAK68480.2| 398|Caenorhabditis elegans Hypothetical
protein Y41D4B.6 protein.
Length = 398
Score = 26.2 bits (55), Expect = 7.2
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 142 KAWNGRKGISQDRCQEAIHRKCG-ETPLQIRINYYLELNKFPT 17
K W G K CQE + PL++ I+Y ++L+K PT
Sbjct: 124 KNWKGAK--CDVPCQEKCTADTKIDNPLKVDIDYSIDLSKLPT 164
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 164 TAGLGNVNITYGSLLVQGVQRKVLIVTGLGLPVPNLIGDLFELLV 298
T+G N+T G++L +K+L+ T +G + +L+ LL+
Sbjct: 2039 TSGNTYFNMTVGNMLKGNEGKKLLLDTTVGYKMDDLLTSYISLLI 2083
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,449,444
Number of Sequences: 27780
Number of extensions: 203832
Number of successful extensions: 725
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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