BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h24r
(367 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 25 0.28
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 24 0.49
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 24 0.49
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 24 0.49
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 0.49
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 24 0.49
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 24 0.49
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 24 0.49
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 0.49
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 0.49
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 1.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 1.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 1.1
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 2.0
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 22 2.0
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 2.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 2.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 2.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 2.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 2.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 2.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 2.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 2.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 2.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 2.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 2.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 2.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 2.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 2.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 3.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.0
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 20 8.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 20 8.0
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 25.0 bits (52), Expect = 0.28
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTSKMRR 72
R++E G ERS+ P S RSNTS + +
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNTSNISK 98
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.2 bits (50), Expect = 0.49
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSNTS
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNTS 94
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.2 bits (50), Expect = 0.49
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSNTS
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNTS 94
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.2 bits (50), Expect = 0.49
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSNTS
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNTS 94
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.2 bits (50), Expect = 0.49
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSNTS
Sbjct: 70 REIEKLGSERSKSRSPGSRDRSNTS 94
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.2 bits (50), Expect = 0.49
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSNTS
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNTS 94
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.2 bits (50), Expect = 0.49
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSNTS
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNTS 94
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 24.2 bits (50), Expect = 0.49
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSNTS
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNTS 94
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 0.49
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSNTS
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNTS 94
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 24.2 bits (50), Expect = 0.49
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSNTS
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNTS 94
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 1.1
Identities = 5/22 (22%), Positives = 13/22 (59%)
Frame = +3
Query: 51 MRIWSGVSPHFRCIASWHRSWE 116
+ +W SP++ + +W+ W+
Sbjct: 658 LALWLNHSPNYDQVTNWYMGWK 679
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 1.1
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -1
Query: 190 DVNIAQPSGLVESAKWKAWNGRKGISQDRCQEAIHRKC 77
D++++ +G +E K S RC IH+ C
Sbjct: 452 DLSVSGEAG-IEEVKSPVLRSPPAFSHSRCPPEIHKSC 488
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 1.1
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -1
Query: 190 DVNIAQPSGLVESAKWKAWNGRKGISQDRCQEAIHRKC 77
D++++ +G +E K S RC IH+ C
Sbjct: 452 DLSVSGEAG-IEEVKSPVLRSPPAFSHSRCPPEIHKSC 488
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 1.1
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S +SNTS
Sbjct: 70 REIEKLGSERSKSRSPDSRDKSNTS 94
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 2.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 141 FHLALSTRPLGWAMLTSP 194
FHL ++T P G A + SP
Sbjct: 363 FHLYINTAPCGDARIFSP 380
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 22.2 bits (45), Expect = 2.0
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3
Query: 137 MERSQRHLPRSMPRSNTSKM 78
++++ RHLPRSM + +T K+
Sbjct: 77 VQKALRHLPRSM-QDSTKKL 95
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -3
Query: 152 RQVE--GMERSQRHLPRSMPRSNTS 84
R++E G ERS+ P S RSN S
Sbjct: 70 REIEKLGSERSKSRSPDSRDRSNAS 94
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 303 LSTSNSNRSPIRLGTGRPSPVTMRTL 226
LST+ ++ P G + SPV+M L
Sbjct: 372 LSTALMSQPPPNFGVSQVSPVSMSAL 397
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 3.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 129 PFHAFHLALSTRPLGWAMLTSPMV 200
PF + H L+ RPL T PM+
Sbjct: 1040 PFVSNHDILNLRPLSMEKGTRPMI 1063
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 247 PSDDENLALYSLYKQATIGDVNIAQPSGLVE 155
P+D+ + Y+++ + GD + AQ S V+
Sbjct: 1390 PTDNAPIHGYTIHYKPEFGDWDTAQISSTVQ 1420
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = -2
Query: 204 RLP*VMLTLPSPAVLWRAPSGRHGTVAKASPKI 106
+LP + + +P+P V W+ G V ++S ++
Sbjct: 1295 KLPCLAVGVPAPEVTWKV----RGAVLQSSDRL 1323
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 20.2 bits (40), Expect = 8.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3
Query: 213 REYSARFSSSL 245
R YS RFSSS+
Sbjct: 22 RRYSKRFSSSI 32
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 20.2 bits (40), Expect = 8.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 337 LPPDLKR*HKMSLDEQFKQVADKVRN 260
L ++KR ++ KQVAD++RN
Sbjct: 384 LDEEMKRTDELLYQMIPKQVADRLRN 409
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,158
Number of Sequences: 438
Number of extensions: 2988
Number of successful extensions: 38
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8680350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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