Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h24r
(367 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identic... 57 4e-09
At3g05420.2 68416.m00594 acyl-CoA binding family protein similar... 48 1e-06
At3g05420.1 68416.m00593 acyl-CoA binding family protein similar... 48 1e-06
At5g27630.1 68418.m03310 acyl-CoA binding family protein similar... 48 2e-06
At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / AC... 38 0.003
At1g51355.1 68414.m05776 expressed protein 36 0.008
At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 35 0.014
At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / AC... 35 0.019
At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / AC... 35 0.019
At3g47700.1 68416.m05196 chromosome structural maintenance prote... 30 0.41
At4g00300.1 68417.m00037 fringe-related protein + weak similarit... 29 0.95
At2g24010.1 68415.m02868 serine carboxypeptidase S10 family prot... 29 0.95
At1g55560.1 68414.m06359 multi-copper oxidase type I family prot... 29 1.3
At1g20600.1 68414.m02573 DNA-binding protein-related low similar... 29 1.3
At5g55770.1 68418.m06951 DC1 domain-containing protein contains ... 28 1.7
At1g62870.1 68414.m07099 expressed protein 28 2.2
At4g03170.1 68417.m00433 hypothetical protein 27 2.9
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 27 3.8
At3g13400.1 68416.m01685 multi-copper oxidase type I family prot... 27 3.8
At3g52890.2 68416.m05829 protein kinase (KIPK) identical to prot... 27 5.0
At3g52890.1 68416.m05828 protein kinase (KIPK) identical to prot... 27 5.0
At3g13390.1 68416.m01684 multi-copper oxidase type I family prot... 27 5.0
At5g53430.1 68418.m06640 PHD finger family protein / SET domain-... 26 6.7
At4g33910.1 68417.m04812 oxidoreductase, 2OG-Fe(II) oxygenase fa... 26 6.7
At4g33080.1 68417.m05678 protein kinase, putative contains prote... 26 6.7
At3g61740.1 68416.m06923 PHD finger family protein (ATX3) contai... 26 6.7
At2g23096.1 68415.m02755 oxidoreductase, 2OG-Fe(II) oxygenase fa... 26 6.7
At1g55570.1 68414.m06360 multi-copper oxidase type I family prot... 26 6.7
At5g55780.1 68418.m06952 DC1 domain-containing protein contains ... 26 8.8
At4g27910.1 68417.m04006 PHD finger protein-related / SET domain... 26 8.8
At4g10370.1 68417.m01702 DC1 domain-containing protein contains ... 26 8.8
At2g41520.2 68415.m05131 DNAJ heat shock N-terminal domain-conta... 26 8.8
At2g41520.1 68415.m05130 DNAJ heat shock N-terminal domain-conta... 26 8.8
At1g10020.1 68414.m01130 expressed protein 26 8.8
>At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identical
to acyl-CoA-binding protein (ACBP) [Arabidopsis
thaliana] SWISS-PROT:P57752
Length = 92
Score = 56.8 bits (131), Expect = 4e-09
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = -1
Query: 307 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAW 134
M L E+F++ A+KV PS+++ L LY LYKQA G V+ ++P + E AKW AW
Sbjct: 1 MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60
Query: 133 NGRKGISQD 107
+G S +
Sbjct: 61 KAVEGKSSE 69
>At3g05420.2 68416.m00594 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 669
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = -1
Query: 265 RNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNG 128
+N +K DD L LY+LY+QAT+G N +PS VE +KWK+W G
Sbjct: 33 KNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQG 80
>At3g05420.1 68416.m00593 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 668
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = -1
Query: 265 RNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNG 128
+N +K DD L LY+LY+QAT+G N +PS VE +KWK+W G
Sbjct: 33 KNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQG 80
>At5g27630.1 68418.m03310 acyl-CoA binding family protein similar to
RING finger rngB protein, cytosolic - Dictyostelium
discoideum, PIR:S68824; contains Pfam profiles PF01344:
Kelch motif, PF00887: Acyl CoA binding protein (ACBP)
Length = 648
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = -1
Query: 268 VRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNG 128
V+ +K S+D +L LY+L++QAT+G +I +PS VE +KWK+W G
Sbjct: 33 VKQLSSKFSNDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQSKWKSWQG 81
>At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / ACBP,
putative similar to acyl-CoA binding protein 2
[Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 338
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 250 KPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAW 134
K S++ L LY LYK AT G QPS L AKW+AW
Sbjct: 116 KVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAW 156
>At1g51355.1 68414.m05776 expressed protein
Length = 116
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = -2
Query: 315 NTKCLSTSNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSP 169
N+ STS+++ SP T PSPV+ + CTP SR+P ++ P+P
Sbjct: 32 NSDVTSTSSTSTSPT--STATPSPVSAESGCCTPEKSRIPEMLTCPPAP 78
>At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2)
identical to acyl-CoA binding protein 2 [Arabidopsis
thaliana] gi|12039034|gb|AAG46057
Length = 354
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 247 PSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAW 134
PSD + LY LYK AT G QPS L AKW+AW
Sbjct: 128 PSDVQQ-QLYGLYKIATEGPCTAPQPSALKMTARAKWQAW 166
>At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 362
Score = 34.7 bits (76), Expect = 0.019
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 238 DENLALYSLYKQATIGDVNIAQPSGLVESA--KWKAWNGRKGISQDRCQE 95
+ + L+ L+K AT G AQP ++ SA KW AW +SQ+ E
Sbjct: 254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEAME 303
>At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 364
Score = 34.7 bits (76), Expect = 0.019
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 238 DENLALYSLYKQATIGDVNIAQPSGLVESA--KWKAWNGRKGISQDRCQE 95
+ + L+ L+K AT G AQP ++ SA KW AW +SQ+ E
Sbjct: 254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEAME 303
>At3g47700.1 68416.m05196 chromosome structural maintenance
protein-related contains weak similarity to
RAD50-interacting protein 1 [Homo sapiens]
gi|11967435|gb|AAG42101
Length = 795
Score = 30.3 bits (65), Expect = 0.41
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = -1
Query: 310 KMSLDEQ---FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAK 146
++ LDE+ FK+ D RNW K DE ++ ++Y+ I + + S ++E +K
Sbjct: 456 EIELDERLVKFKEEIDNDRNWTAK-VQDELISSSNVYRPPIISSIFLQHLSSIIERSK 512
>At4g00300.1 68417.m00037 fringe-related protein + weak similarity
to Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 785
Score = 29.1 bits (62), Expect = 0.95
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Frame = +3
Query: 105 RSWEMPLRPFHAFHL-------ALSTRPLGWAMLTSPMVACLYREYSARFSSSLGLVFQF 263
R E+P R F+ +HL A +TRP+ W P V +S SS + Q+
Sbjct: 372 RMMEVPTRTFNDWHLRSDFTNLAFNTRPVTWTDCQRPRVFYFSHAFSNSSSSDTTTISQY 431
Query: 264 L 266
L
Sbjct: 432 L 432
>At2g24010.1 68415.m02868 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
Length = 425
Score = 29.1 bits (62), Expect = 0.95
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = -1
Query: 313 HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQ-ATIGDVNIAQPSGLVESAKWKA 137
H M D+ +K + K SD N ALY Y++ + +I PS + ++ + K
Sbjct: 203 HAMISDKTYKSILKHCSFTADKTSDKCNWALYFAYREFGKVNGYSIYSPSCVHQTNQTKF 262
Query: 136 WNGRKGISQ---DRCQEA 92
+GR + + D C E+
Sbjct: 263 LHGRLLVEEYEYDPCTES 280
>At1g55560.1 68414.m06359 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 549
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 185 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 271
N+TYG+ GV +KV+++ G P PNL
Sbjct: 31 NVTYGTASPLGVPQKVILING-QFPGPNL 58
>At1g20600.1 68414.m02573 DNA-binding protein-related low similarity
to RAV2 [Arabidopsis thaliana] GI:3868859
Length = 237
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 190 DVNIAQPSGLVESAKWKAWNGRK 122
DV++ P G V+ K+K WNG K
Sbjct: 167 DVSVYGPDGEVQQMKFKMWNGDK 189
>At5g55770.1 68418.m06951 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 695
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 154 SAKWKAWNGRKGISQDRCQEAIHRKCGETPLQIR 53
+ K K + K + +CQ HR+C E+PL+I+
Sbjct: 158 ACKGKMLDTSKDYACLQCQRKFHRECVESPLEIK 191
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 217 SLYKQATIGDVNIAQPSGLVESAKWKAWNGRKGISQDRC 101
SLY++A VN A PS E W+ G G S RC
Sbjct: 319 SLYRRAVF--VNGAVPSNYAEEVLWETVRGICGNSPQRC 355
>At4g03170.1 68417.m00433 hypothetical protein
Length = 250
Score = 27.5 bits (58), Expect = 2.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 190 DVNIAQPSGLVESAKWKAWNGRK 122
DV++ P G V+ ++K WNG K
Sbjct: 178 DVSVYGPDGKVQQMEFKMWNGDK 200
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 295 EQFKQVADKVRNWKTKPSDDENLALYSLYKQATI-GDVNIAQPSGLVE 155
E+F+ + + VR W TKP ++A + LYK I I Q G+ E
Sbjct: 729 EEFRLLFEYVREWNTKPKLC-HIAQFVLYKTFNILPPTEIVQVKGIGE 775
>At3g13400.1 68416.m01685 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 185 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 271
N+TYG+ G+ ++V+++ G P PNL
Sbjct: 32 NVTYGTAAPLGIPQQVILING-QFPGPNL 59
>At3g52890.2 68416.m05829 protein kinase (KIPK) identical to protein
kinase KIPK (KCBP-interacting protein kinase)
[Arabidopsis thaliana] gi|7716430|gb|AAF68383
Length = 934
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -3
Query: 137 MERSQRHLPRSMPR--SNTSKMRRNSTPNTHKLL 42
+ ++Q+HL RS+P+ + ++ R NS TH+ L
Sbjct: 753 LSKTQQHLSRSLPQLVAEPTEARSNSFVGTHEYL 786
>At3g52890.1 68416.m05828 protein kinase (KIPK) identical to protein
kinase KIPK (KCBP-interacting protein kinase)
[Arabidopsis thaliana] gi|7716430|gb|AAF68383
Length = 934
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -3
Query: 137 MERSQRHLPRSMPR--SNTSKMRRNSTPNTHKLL 42
+ ++Q+HL RS+P+ + ++ R NS TH+ L
Sbjct: 753 LSKTQQHLSRSLPQLVAEPTEARSNSFVGTHEYL 786
>At3g13390.1 68416.m01684 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 554
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 185 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 271
N+TYG++ GV ++V+++ G P PN+
Sbjct: 33 NVTYGTVSPLGVPQQVILING-QFPGPNV 60
>At5g53430.1 68418.m06640 PHD finger family protein / SET
domain-containing protein (TX5) contains Pfam domain,
PF00628: PHD-finger and PF00856: SET domain; identical
to cDNA trithorax 5 (TX5) partial cds GI:16118406
Length = 1043
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 187 VNIAQPSGLVESAKW-KAWNGRKGISQDRCQEAIHRKC 77
VN+ + +W + W+ K I +RCQ A+H++C
Sbjct: 601 VNVKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQEC 638
>At4g33910.1 68417.m04812 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Gallus gallus [GI:212530], Rattus
norvegicus [GI:474940], Drosophila melanogaster
[GI:4336512]; contains PF03171 2OG-Fe(II) oxygenase
superfamily domain
Length = 288
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -1
Query: 256 KTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 137
K KP + L YS++ TI ++ + + KW A
Sbjct: 238 KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVA 277
>At4g33080.1 68417.m05678 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 519
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 103 IDLGRCLCDRSMPSTWRSPQDR 168
+D+ RC D +WRSPQ++
Sbjct: 265 MDVDRCFPDTDNKRSWRSPQEQ 286
>At3g61740.1 68416.m06923 PHD finger family protein (ATX3) contains
Pfam domains PF00628: PHD-finger and PF00855: PWWP
domain; identical to cDNA trithorax 3 (ATX3) partial cds
GI:15217142
Length = 799
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 148 KW-KAWNGRKGISQDRCQEAIHRKC 77
+W + W K I +RCQ A+H++C
Sbjct: 497 RWVEDWEENKMIICNRCQVAVHQEC 521
>At2g23096.1 68415.m02755 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profile: PF03171
oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 274
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = -1
Query: 274 DKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 137
+K K KP + + Y+L+ TI ++ +++ KW A
Sbjct: 219 EKCVGLKVKPRQGDAIFFYNLFPNGTIDQTSLHGSCPVIKGEKWVA 264
>At1g55570.1 68414.m06360 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 555
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 185 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 271
N+TYG+ GV ++V+++ G P PN+
Sbjct: 34 NVTYGTASPLGVPQQVILING-QFPGPNI 61
>At5g55780.1 68418.m06952 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 685
Score = 25.8 bits (54), Expect = 8.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -1
Query: 106 RCQEAIHRKCGETPLQIR 53
+CQ H++C E+PL+I+
Sbjct: 153 QCQGKFHKECVESPLEIK 170
>At4g27910.1 68417.m04006 PHD finger protein-related / SET
domain-containing protein (TX4) nearly identical over
285 amino acids to trithorax 4 [Arabidopsis thaliana]
GI:16118405; contains Pfam profiles PF00856: SET domain,
PF00855: PWWP domain; identical to cDNA trithorax 4
(TX4) partial cds GI:16118404
Length = 1027
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 250 KPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKW-KAWNGRKGISQDRCQEAIHRKC 77
+PS + + T VN + +W + W+ K I +RCQ A+H++C
Sbjct: 565 RPSIKQRKQRLLAFLSETYEPVNAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQEC 623
>At4g10370.1 68417.m01702 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 687
Score = 25.8 bits (54), Expect = 8.8
Identities = 7/18 (38%), Positives = 15/18 (83%)
Frame = -1
Query: 106 RCQEAIHRKCGETPLQIR 53
+C++ H++C E+PL+I+
Sbjct: 149 QCEKKFHKECVESPLEIK 166
>At2g41520.2 68415.m05131 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1077
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = -3
Query: 173 AQRSCGERQVEGMERSQRHLPRSMPRSNTSKMRRNSTPN 57
+Q + ++++ +++ +R + S+P+SN + RN+ N
Sbjct: 493 SQETIRHKKLQAVKKYRRKVNNSLPKSNLNATMRNNQEN 531
>At2g41520.1 68415.m05130 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1108
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/39 (23%), Positives = 24/39 (61%)
Frame = -3
Query: 173 AQRSCGERQVEGMERSQRHLPRSMPRSNTSKMRRNSTPN 57
+Q + ++++ +++ +R + S+P+SN + RN+ N
Sbjct: 493 SQETIRHKKLQAVKKYRRKVNNSLPKSNLNATMRNNQEN 531
>At1g10020.1 68414.m01130 expressed protein
Length = 461
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/37 (24%), Positives = 18/37 (48%)
Frame = +2
Query: 50 YAYLEWSFSAFSMYCFLASILGDAFATVPCLPLGALH 160
Y Y W ++ + + AS+ G+ + PC+ + H
Sbjct: 384 YGYGLWPWNVYKGFVMSASVEGEGKCSKPCVEVSVQH 420
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,003,652
Number of Sequences: 28952
Number of extensions: 197054
Number of successful extensions: 645
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 477939072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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