Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h23r
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   5.2  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       23   6.9  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 144 FPSATSFSSKGIGLKSC*SGNFLCQPSKI 230
           +P  T  + KGI +    +GN  C+P+ I
Sbjct: 888 YPRGTEQTEKGISICDAINGNCHCKPNVI 916


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -3

Query: 490 GSETSEATYKTMMEWGKSVGKTCITC 413
           G +     Y+  +EW +++ K C  C
Sbjct: 296 GRKPETCYYRFRLEWYRTLSKACYNC 321


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 549 NLSFLFTTDAISFIDREDVFDAKIV 623
           N  +   T  I F++++D+F+ KIV
Sbjct: 254 NSKWFVETSIILFLNKKDLFEEKIV 278


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,159
Number of Sequences: 2352
Number of extensions: 16515
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)