Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h22r
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.1  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   7.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.3  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +2

Query: 200 TYK*INKILLRTIVVLFYNLFIYSKIQHELSP*WRGFYYL 319
           TY+     ++ +  V F++ +I + + + +S     FYYL
Sbjct: 29  TYRLYKIFVVFSFAVTFFSAWICALVNYNVSEISENFYYL 68


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 180  YNKAVEGHINKLTKSCYEQSWFY 248
            Y +A + ++++ +    E SWFY
Sbjct: 1154 YMEAPQDNVSQPSDEVMENSWFY 1176


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 180  YNKAVEGHINKLTKSCYEQSWFY 248
            Y +A + ++++ +    E SWFY
Sbjct: 1154 YMEAPQDNVSQPSDEVMENSWFY 1176


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 165 KNPTLKNVCTYIDFQYSISS 106
           K  TLK    YIDF Y + S
Sbjct: 133 KIQTLKLAARYIDFLYHVLS 152


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 452 IIKSFKLIYKAYHKSLFERGHHCKFFYPLLNWAN 553
           +I+SFK  YK  ++ L       K    L+N AN
Sbjct: 192 LIRSFKSRYKDLNQKLETACEQSKSVEELMNIAN 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,259
Number of Sequences: 336
Number of extensions: 3030
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)